EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017774 (Gene tree)
Gene ID: 102784736
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5436 bases
Position: chrJH422325.1:3657123-3662558
Accession: 102784736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023217	RRM_1	PF00076.22	1.6e-27	1	2
ENSNBRP00000023217	RRM_1	PF00076.22	1.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023827	-	1453	XM_006797725	ENSNBRP00000023217	411 (aa)	XP_006797788	UPI0003EC28F7

Gene Model

Click here to download ENSNBRG00000017774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017774	grsf1	74	41.908	ENSNBRG00000015406	hnrnph1	95	41.360
ENSNBRG00000017774	grsf1	73	52.000	ENSNBRG00000004383	hnrnph3	67	52.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017774	grsf1	96	70.101	ENSAPOG00000012487	grsf1	98	70.101	Acanthochromis_polyacanthus
ENSNBRG00000017774	grsf1	96	80.153	ENSACIG00000005871	grsf1	98	80.153	Amphilophus_citrinellus
ENSNBRG00000017774	grsf1	96	72.040	ENSAOCG00000017462	-	98	72.040	Amphiprion_ocellaris
ENSNBRG00000017774	grsf1	96	72.431	ENSAPEG00000007240	-	98	72.431	Amphiprion_percula
ENSNBRG00000017774	grsf1	97	65.842	ENSATEG00000007185	grsf1	100	65.842	Anabas_testudineus
ENSNBRG00000017774	grsf1	99	96.333	ENSACLG00000003685	-	100	96.333	Astatotilapia_calliptera
ENSNBRG00000017774	grsf1	83	50.926	ENSAMXG00000012270	grsf1	98	50.926	Astyanax_mexicanus
ENSNBRG00000017774	grsf1	96	59.006	ENSCSEG00000019209	-	99	59.627	Cynoglossus_semilaevis
ENSNBRG00000017774	grsf1	96	62.563	ENSCVAG00000004476	grsf1	99	62.563	Cyprinodon_variegatus
ENSNBRG00000017774	grsf1	95	46.329	ENSDARG00000053021	grsf1	93	46.329	Danio_rerio
ENSNBRG00000017774	grsf1	96	48.889	ENSFHEG00000013358	-	98	49.383	Fundulus_heteroclitus
ENSNBRG00000017774	grsf1	73	52.318	ENSGMOG00000014047	grsf1	98	52.318	Gadus_morhua
ENSNBRG00000017774	grsf1	96	61.042	ENSGAFG00000004496	grsf1	99	61.042	Gambusia_affinis
ENSNBRG00000017774	grsf1	74	62.382	ENSGACG00000014447	grsf1	97	62.382	Gasterosteus_aculeatus
ENSNBRG00000017774	grsf1	100	96.594	ENSHBUG00000006284	grsf1	99	96.594	Haplochromis_burtoni
ENSNBRG00000017774	grsf1	96	57.500	ENSHCOG00000007715	-	98	57.500	Hippocampus_comes
ENSNBRG00000017774	grsf1	78	54.012	ENSIPUG00000010533	grsf1	79	54.012	Ictalurus_punctatus
ENSNBRG00000017774	grsf1	96	60.287	ENSKMAG00000004528	grsf1	99	60.287	Kryptolebias_marmoratus
ENSNBRG00000017774	grsf1	74	58.033	ENSLBEG00000018100	grsf1	95	58.033	Labrus_bergylta
ENSNBRG00000017774	grsf1	96	67.662	ENSMAMG00000002627	grsf1	99	67.662	Mastacembelus_armatus
ENSNBRG00000017774	grsf1	96	96.183	ENSMZEG00005020633	-	98	96.183	Maylandia_zebra
ENSNBRG00000017774	grsf1	92	64.935	ENSMMOG00000014231	grsf1	100	64.736	Mola_mola
ENSNBRG00000017774	grsf1	96	66.339	ENSMALG00000000251	grsf1	99	66.339	Monopterus_albus
ENSNBRG00000017774	grsf1	96	94.911	ENSONIG00000014119	grsf1	98	94.911	Oreochromis_niloticus
ENSNBRG00000017774	grsf1	95	61.795	ENSORLG00000030211	grsf1	98	61.795	Oryzias_latipes
ENSNBRG00000017774	grsf1	95	61.026	ENSORLG00020014383	grsf1	98	61.538	Oryzias_latipes_hni
ENSNBRG00000017774	grsf1	95	61.538	ENSORLG00015006520	grsf1	98	61.538	Oryzias_latipes_hsok
ENSNBRG00000017774	grsf1	86	66.761	ENSOMEG00000009181	grsf1	98	64.872	Oryzias_melastigma
ENSNBRG00000017774	grsf1	80	55.090	ENSPKIG00000019432	grsf1	87	52.575	Paramormyrops_kingsleyae
ENSNBRG00000017774	grsf1	78	65.244	ENSPMGG00000013654	grsf1	90	65.244	Periophthalmus_magnuspinnatus
ENSNBRG00000017774	grsf1	96	60.688	ENSPFOG00000006122	grsf1	99	61.125	Poecilia_formosa
ENSNBRG00000017774	grsf1	96	61.728	ENSPLAG00000020977	grsf1	99	61.728	Poecilia_latipinna
ENSNBRG00000017774	grsf1	96	61.425	ENSPMEG00000012485	grsf1	99	61.858	Poecilia_mexicana
ENSNBRG00000017774	grsf1	96	60.934	ENSPREG00000013383	grsf1	99	61.425	Poecilia_reticulata
ENSNBRG00000017774	grsf1	96	95.420	ENSPNYG00000005379	grsf1	98	95.420	Pundamilia_nyererei
ENSNBRG00000017774	grsf1	78	56.656	ENSPNAG00000014912	grsf1	77	56.656	Pygocentrus_nattereri
ENSNBRG00000017774	grsf1	80	46.108	ENSSFOG00015014620	grsf1	83	46.108	Scleropages_formosus
ENSNBRG00000017774	grsf1	96	61.728	ENSSMAG00000014181	grsf1	88	61.728	Scophthalmus_maximus
ENSNBRG00000017774	grsf1	96	63.184	ENSSDUG00000009397	-	96	70.253	Seriola_dumerili
ENSNBRG00000017774	grsf1	96	64.677	ENSSLDG00000025494	grsf1	98	64.677	Seriola_lalandi_dorsalis
ENSNBRG00000017774	grsf1	96	66.080	ENSSPAG00000023296	grsf1	98	66.080	Stegastes_partitus
ENSNBRG00000017774	grsf1	93	59.115	ENSTRUG00000015354	grsf1	99	59.091	Takifugu_rubripes
ENSNBRG00000017774	grsf1	78	63.009	ENSTNIG00000015350	-	100	63.009	Tetraodon_nigroviridis
ENSNBRG00000017774	grsf1	96	61.538	ENSXMAG00000029710	grsf1	99	61.538	Xiphophorus_maculatus