EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000017820 (Gene tree)
Gene ID
102775593
Gene Symbol
-
Alias
-
Full Name
HMG box-containing protein 1-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
8657 bases
Position
chrJH422435.1:587862-596518
Accession
102775593
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000023273AXHPF08517.127e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000023885-4401XM_006806475ENSNBRP00000023273505 (aa)XP_006806538UPI0003EBE8CA
Gene Model
Click here to download ENSNBRG00000017820's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017820's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000017820-9261.620ENSNBRG00000001405hbp19562.900
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000017820-9954.049ENSG00000105856HBP19765.132Homo_sapiens
ENSNBRG00000017820-9260.768ENSAPOG00000015816hbp19962.260Acanthochromis_polyacanthus
ENSNBRG00000017820-9953.220ENSAMEG00000013492HBP19952.852Ailuropoda_melanoleuca
ENSNBRG00000017820-9985.600ENSACIG00000019093-9685.400Amphilophus_citrinellus
ENSNBRG00000017820-9062.391ENSACIG00000018873hbp19063.696Amphilophus_citrinellus
ENSNBRG00000017820-10082.318ENSAOCG00000001429-9983.497Amphiprion_ocellaris
ENSNBRG00000017820-9261.194ENSAOCG00000010889hbp19962.687Amphiprion_ocellaris
ENSNBRG00000017820-10083.629ENSAPEG00000022589-9983.629Amphiprion_percula
ENSNBRG00000017820-9260.981ENSAPEG00000002330hbp19962.473Amphiprion_percula
ENSNBRG00000017820-9261.277ENSATEG00000016411hbp19962.340Anabas_testudineus
ENSNBRG00000017820-9980.478ENSATEG00000003902-9880.679Anabas_testudineus
ENSNBRG00000017820-9952.453ENSAPLG00000007110HBP19952.453Anas_platyrhynchos
ENSNBRG00000017820-9953.220ENSACAG00000015023HBP19953.890Anolis_carolinensis
ENSNBRG00000017820-9954.049ENSANAG00000022302HBP19068.487Aotus_nancymaae
ENSNBRG00000017820-9261.407ENSACLG00000004758hbp19562.687Astatotilapia_calliptera
ENSNBRG00000017820-10097.624ENSACLG00000003606HBP110097.624Astatotilapia_calliptera
ENSNBRG00000017820-10060.665ENSAMXG00000017678hbp19761.057Astyanax_mexicanus
ENSNBRG00000017820-9953.875ENSBTAG00000005524HBP19853.890Bos_taurus
ENSNBRG00000017820-9953.861ENSCJAG00000016260HBP19068.487Callithrix_jacchus
ENSNBRG00000017820-9954.064ENSCAFG00000003939HBP19853.700Canis_familiaris
ENSNBRG00000017820-9954.064ENSCAFG00020023119HBP19853.700Canis_lupus_dingo
ENSNBRG00000017820-9953.497ENSCHIG00000024405HBP19953.510Capra_hircus
ENSNBRG00000017820-9953.947ENSTSYG00000010057HBP19953.947Carlito_syrichta
ENSNBRG00000017820-9952.930ENSCAPG00000017460HBP19952.652Cavia_aperea
ENSNBRG00000017820-9953.308ENSCPOG00000002375HBP19853.030Cavia_porcellus
ENSNBRG00000017820-9953.686ENSCCAG00000026359HBP19068.487Cebus_capucinus
ENSNBRG00000017820-9954.237ENSCATG00000021910HBP19954.237Cercocebus_atys
ENSNBRG00000017820-9954.049ENSCLAG00000005170HBP19953.686Chinchilla_lanigera
ENSNBRG00000017820-9954.237ENSCSAG00000011395HBP19854.237Chlorocebus_sabaeus
ENSNBRG00000017820-7082.000ENSCHOG00000006820HBP15782.000Choloepus_hoffmanni
ENSNBRG00000017820-9953.119ENSCPBG00000000954HBP19753.119Chrysemys_picta_bellii
ENSNBRG00000017820-9953.686ENSCANG00000022804HBP19953.686Colobus_angolensis_palliatus
ENSNBRG00000017820-9952.830ENSCGRG00001014437Hbp19852.830Cricetulus_griseus_chok1gshd
ENSNBRG00000017820-9952.830ENSCGRG00000013859Hbp19852.830Cricetulus_griseus_crigri
ENSNBRG00000017820-9162.232ENSCSEG00000003373hbp19863.519Cynoglossus_semilaevis
ENSNBRG00000017820-10076.634ENSCVAG00000008501-9976.634Cyprinodon_variegatus
ENSNBRG00000017820-9261.407ENSCVAG00000008930hbp19962.047Cyprinodon_variegatus
ENSNBRG00000017820-10062.035ENSDARG00000028517hbp110062.427Danio_rerio
ENSNBRG00000017820-9953.672ENSDNOG00000004405HBP19553.672Dasypus_novemcinctus
ENSNBRG00000017820-7047.849ENSDORG00000010576Hbp19747.849Dipodomys_ordii
ENSNBRG00000017820-9949.153ENSETEG00000018542HBP19949.153Echinops_telfairi
ENSNBRG00000017820-9144.711ENSEBUG00000016475hbp18445.902Eptatretus_burgeri
ENSNBRG00000017820-9953.962ENSEASG00005017469HBP19154.151Equus_asinus_asinus
ENSNBRG00000017820-9953.774ENSECAG00000020969HBP19853.962Equus_caballus
ENSNBRG00000017820-10062.818ENSELUG00000017031-9362.427Esox_lucius
ENSNBRG00000017820-9462.863ENSELUG00000006967hbp19962.241Esox_lucius
ENSNBRG00000017820-9953.208ENSFCAG00000005858HBP19153.774Felis_catus
ENSNBRG00000017820-9952.354ENSFALG00000010259HBP19752.354Ficedula_albicollis
ENSNBRG00000017820-9953.308ENSFDAG00000007897HBP19853.119Fukomys_damarensis
ENSNBRG00000017820-9260.554ENSFHEG00000008222hbp19961.834Fundulus_heteroclitus
ENSNBRG00000017820-9975.842ENSFHEG00000014389-9975.842Fundulus_heteroclitus
ENSNBRG00000017820-9260.256ENSGMOG00000013782hbp19961.111Gadus_morhua
ENSNBRG00000017820-9952.453ENSGALG00000008050HBP19752.453Gallus_gallus
ENSNBRG00000017820-9260.981ENSGAFG00000021976hbp19962.687Gambusia_affinis
ENSNBRG00000017820-10076.832ENSGAFG00000004651-9976.832Gambusia_affinis
ENSNBRG00000017820-9259.197ENSGACG00000010054hbp19960.042Gasterosteus_aculeatus
ENSNBRG00000017820-9475.262ENSGACG00000019192-9775.262Gasterosteus_aculeatus
ENSNBRG00000017820-9953.030ENSGAGG00000023042HBP19753.030Gopherus_agassizii
ENSNBRG00000017820-9953.861ENSGGOG00000007788HBP19068.201Gorilla_gorilla
ENSNBRG00000017820-9261.620ENSHBUG00000004967hbp19562.900Haplochromis_burtoni
ENSNBRG00000017820-10098.020ENSHBUG00000016198-10098.020Haplochromis_burtoni
ENSNBRG00000017820-9953.774ENSHGLG00000019188HBP19853.774Heterocephalus_glaber_female
ENSNBRG00000017820-9141.387ENSHGLG00100014672-9240.956Heterocephalus_glaber_male
ENSNBRG00000017820-9953.774ENSHGLG00100001912HBP19853.774Heterocephalus_glaber_male
ENSNBRG00000017820-9258.422ENSHCOG00000011877hbp19959.275Hippocampus_comes
ENSNBRG00000017820-10065.347ENSHCOG00000010740-9564.752Hippocampus_comes
ENSNBRG00000017820-10060.156ENSIPUG00000023044hbp19760.547Ictalurus_punctatus
ENSNBRG00000017820-9954.237ENSSTOG00000013846HBP19853.875Ictidomys_tridecemlineatus
ENSNBRG00000017820-9953.875ENSJJAG00000015341Hbp19853.875Jaculus_jaculus
ENSNBRG00000017820-9261.620ENSKMAG00000003132hbp19962.473Kryptolebias_marmoratus
ENSNBRG00000017820-9374.573ENSKMAG00000000266-9575.000Kryptolebias_marmoratus
ENSNBRG00000017820-10075.296ENSLBEG00000023959-10074.704Labrus_bergylta
ENSNBRG00000017820-9261.915ENSLBEG00000012078hbp19962.766Labrus_bergylta
ENSNBRG00000017820-9954.649ENSLACG00000009119HBP19754.151Latimeria_chalumnae
ENSNBRG00000017820-10059.273ENSLOCG00000015822hbp19859.273Lepisosteus_oculatus
ENSNBRG00000017820-9953.107ENSLAFG00000005317HBP19953.107Loxodonta_africana
ENSNBRG00000017820-9954.237ENSMFAG00000030375HBP19168.619Macaca_fascicularis
ENSNBRG00000017820-9954.151ENSMMUG00000015409HBP19164.220Macaca_mulatta
ENSNBRG00000017820-9952.099ENSMNEG00000037516HBP19952.099Macaca_nemestrina
ENSNBRG00000017820-9953.875ENSMLEG00000031993HBP19953.875Mandrillus_leucophaeus
ENSNBRG00000017820-10077.282ENSMAMG00000023588-10077.282Mastacembelus_armatus
ENSNBRG00000017820-9262.393ENSMAMG00000023227hbp19963.248Mastacembelus_armatus
ENSNBRG00000017820-9161.373ENSMZEG00005005999hbp17962.661Maylandia_zebra
ENSNBRG00000017820-10097.624ENSMZEG00005015065HBP110097.624Maylandia_zebra
ENSNBRG00000017820-9952.642ENSMGAG00000006880HBP19852.642Meleagris_gallopavo
ENSNBRG00000017820-9952.453ENSMAUG00000011449Hbp19852.453Mesocricetus_auratus
ENSNBRG00000017820-9954.049ENSMICG00000012858HBP19168.354Microcebus_murinus
ENSNBRG00000017820-9953.208ENSMOCG00000019227Hbp19853.208Microtus_ochrogaster
ENSNBRG00000017820-9459.539ENSMMOG00000012207hbp19759.539Mola_mola
ENSNBRG00000017820-9377.426ENSMMOG00000010239-10077.426Mola_mola
ENSNBRG00000017820-9953.308ENSMODG00000016376HBP18953.119Monodelphis_domestica
ENSNBRG00000017820-9476.744ENSMALG00000010834-9674.268Monopterus_albus
ENSNBRG00000017820-9261.834ENSMALG00000009884hbp19962.687Monopterus_albus
ENSNBRG00000017820-9953.861MGP_CAROLIEiJ_G0017683Hbp19853.672Mus_caroli
ENSNBRG00000017820-9953.861ENSMUSG00000002996Hbp19853.672Mus_musculus
ENSNBRG00000017820-9953.383MGP_PahariEiJ_G0029441Hbp19853.585Mus_pahari
ENSNBRG00000017820-9953.861MGP_SPRETEiJ_G0018525Hbp19853.672Mus_spretus
ENSNBRG00000017820-9953.409ENSMPUG00000018249HBP19853.042Mustela_putorius_furo
ENSNBRG00000017820-9954.340ENSMLUG00000012425HBP19854.340Myotis_lucifugus
ENSNBRG00000017820-9953.672ENSNGAG00000023485Hbp19853.672Nannospalax_galili
ENSNBRG00000017820-9954.237ENSNLEG00000008761HBP19068.201Nomascus_leucogenys
ENSNBRG00000017820-9049.476ENSMEUG00000011116HBP19049.370Notamacropus_eugenii
ENSNBRG00000017820-7082.000ENSOPRG00000005315HBP16982.000Ochotona_princeps
ENSNBRG00000017820-9345.208ENSODEG00000000482-9646.042Octodon_degus
ENSNBRG00000017820-9953.861ENSODEG00000001327-9853.497Octodon_degus
ENSNBRG00000017820-9939.313ENSODEG00000010517-9938.654Octodon_degus
ENSNBRG00000017820-10091.650ENSONIG00000011868-10091.650Oreochromis_niloticus
ENSNBRG00000017820-9261.834ENSONIG00000008523hbp19963.113Oreochromis_niloticus
ENSNBRG00000017820-9952.174ENSOANG00000003174HBP19952.174Ornithorhynchus_anatinus
ENSNBRG00000017820-9954.442ENSOCUG00000012758HBP19954.373Oryctolagus_cuniculus
ENSNBRG00000017820-9258.849ENSORLG00000004396hbp19960.554Oryzias_latipes
ENSNBRG00000017820-10075.446ENSORLG00000009474-9975.446Oryzias_latipes
ENSNBRG00000017820-9259.062ENSORLG00020000370hbp19960.341Oryzias_latipes_hni
ENSNBRG00000017820-10075.842ENSORLG00020004269-9975.842Oryzias_latipes_hni
ENSNBRG00000017820-9258.422ENSORLG00015006557hbp19960.128Oryzias_latipes_hsok
ENSNBRG00000017820-9259.488ENSOMEG00000012837hbp19961.194Oryzias_melastigma
ENSNBRG00000017820-10077.030ENSOMEG00000013045-9877.426Oryzias_melastigma
ENSNBRG00000017820-9954.049ENSOGAG00000013102HBP19954.049Otolemur_garnettii
ENSNBRG00000017820-9953.308ENSOARG00000005055HBP19853.321Ovis_aries
ENSNBRG00000017820-9954.049ENSPPAG00000042116HBP19068.201Pan_paniscus
ENSNBRG00000017820-9953.208ENSPPRG00000007240HBP19953.409Panthera_pardus
ENSNBRG00000017820-9951.321ENSPTIG00000002734HBP19951.515Panthera_tigris_altaica
ENSNBRG00000017820-9954.049ENSPTRG00000019575HBP19068.201Pan_troglodytes
ENSNBRG00000017820-9954.237ENSPANG00000024385HBP19168.619Papio_anubis
ENSNBRG00000017820-9959.961ENSPKIG00000016967hbp19859.961Paramormyrops_kingsleyae
ENSNBRG00000017820-9853.984ENSPKIG00000016269HBP110055.138Paramormyrops_kingsleyae
ENSNBRG00000017820-9953.875ENSPSIG00000012478HBP19253.875Pelodiscus_sinensis
ENSNBRG00000017820-9261.945ENSPMGG00000005789hbp19562.791Periophthalmus_magnuspinnatus
ENSNBRG00000017820-9367.516ENSPMGG00000008031-9665.336Periophthalmus_magnuspinnatus
ENSNBRG00000017820-9953.585ENSPEMG00000014801Hbp19853.585Peromyscus_maniculatus_bairdii
ENSNBRG00000017820-9149.170ENSPMAG00000002631hbp19348.434Petromyzon_marinus
ENSNBRG00000017820-9953.030ENSPCIG00000004275HBP18953.030Phascolarctos_cinereus
ENSNBRG00000017820-9260.981ENSPFOG00000003951hbp19962.687Poecilia_formosa
ENSNBRG00000017820-10076.634ENSPFOG00000012271-9676.634Poecilia_formosa
ENSNBRG00000017820-9280.300ENSPLAG00000012669-9980.300Poecilia_latipinna
ENSNBRG00000017820-9260.981ENSPLAG00000003142hbp19962.687Poecilia_latipinna
ENSNBRG00000017820-9260.981ENSPMEG00000003800hbp19962.687Poecilia_mexicana
ENSNBRG00000017820-10076.832ENSPMEG00000015095-9976.832Poecilia_mexicana
ENSNBRG00000017820-9260.554ENSPREG00000004000hbp19962.260Poecilia_reticulata
ENSNBRG00000017820-5879.038ENSPREG00000015242-8479.038Poecilia_reticulata
ENSNBRG00000017820-9953.861ENSPPYG00000017898HBP19754.049Pongo_abelii
ENSNBRG00000017820-9953.612ENSPCAG00000014060HBP110053.244Procavia_capensis
ENSNBRG00000017820-7360.367ENSPCOG00000015370HBP17663.582Propithecus_coquereli
ENSNBRG00000017820-9954.151ENSPVAG00000014543HBP19954.151Pteropus_vampyrus
ENSNBRG00000017820-9261.407ENSPNYG00000001079hbp19562.687Pundamilia_nyererei
ENSNBRG00000017820-10098.812ENSPNYG00000015063HBP110098.812Pundamilia_nyererei
ENSNBRG00000017820-10060.274ENSPNAG00000029977hbp19760.861Pygocentrus_nattereri
ENSNBRG00000017820-9953.296ENSRNOG00000008927Hbp19853.409Rattus_norvegicus
ENSNBRG00000017820-9948.767ENSRBIG00000042410HBP19948.767Rhinopithecus_bieti
ENSNBRG00000017820-9954.049ENSRROG00000036622HBP19168.201Rhinopithecus_roxellana
ENSNBRG00000017820-9954.049ENSSBOG00000023603HBP18968.487Saimiri_boliviensis_boliviensis
ENSNBRG00000017820-9953.220ENSSHAG00000010948HBP19853.030Sarcophilus_harrisii
ENSNBRG00000017820-10061.942ENSSFOG00015011155hbp110061.748Scleropages_formosus
ENSNBRG00000017820-9261.194ENSSMAG00000009892hbp19962.260Scophthalmus_maximus
ENSNBRG00000017820-10076.863ENSSMAG00000012631-9477.059Scophthalmus_maximus
ENSNBRG00000017820-9262.766ENSSDUG00000022273hbp19963.830Seriola_dumerili
ENSNBRG00000017820-10079.804ENSSDUG00000015387-9679.804Seriola_dumerili
ENSNBRG00000017820-9262.553ENSSLDG00000009669hbp19963.617Seriola_lalandi_dorsalis
ENSNBRG00000017820-9378.737ENSSLDG00000017324-9976.842Seriola_lalandi_dorsalis
ENSNBRG00000017820-9051.357ENSSARG00000007731HBP110050.734Sorex_araneus
ENSNBRG00000017820-9952.731ENSSPUG00000019157HBP19452.731Sphenodon_punctatus
ENSNBRG00000017820-10083.960ENSSPAG00000009193-9983.762Stegastes_partitus
ENSNBRG00000017820-9261.407ENSSPAG00000004739hbp19962.260Stegastes_partitus
ENSNBRG00000017820-9954.528ENSSSCG00000035673HBP19954.528Sus_scrofa
ENSNBRG00000017820-10051.880ENSTGUG00000003100HBP110052.068Taeniopygia_guttata
ENSNBRG00000017820-9261.028ENSTRUG00000016990hbp19962.313Takifugu_rubripes
ENSNBRG00000017820-9166.739ENSTRUG00000011881-7867.102Takifugu_rubripes
ENSNBRG00000017820-9261.111ENSTNIG00000016027hbp19862.179Tetraodon_nigroviridis
ENSNBRG00000017820-9365.200ENSTNIG00000002023-9465.000Tetraodon_nigroviridis
ENSNBRG00000017820-9946.080ENSTBEG00000007793HBP19946.272Tupaia_belangeri
ENSNBRG00000017820-9954.167ENSTTRG00000006826HBP19954.167Tursiops_truncatus
ENSNBRG00000017820-9953.700ENSUAMG00000005951HBP19853.333Ursus_americanus
ENSNBRG00000017820-9953.700ENSUMAG00000018257HBP19853.333Ursus_maritimus
ENSNBRG00000017820-7353.158ENSVPAG00000008629HBP18155.522Vicugna_pacos
ENSNBRG00000017820-9954.064ENSVVUG00000022009HBP19853.700Vulpes_vulpes
ENSNBRG00000017820-9952.841ENSXETG00000005922hbp19951.099Xenopus_tropicalis
ENSNBRG00000017820-9160.730ENSXCOG00000020795hbp19162.446Xiphophorus_couchianus
ENSNBRG00000017820-9261.834ENSXMAG00000016455hbp19962.900Xiphophorus_maculatus
ENSNBRG00000017820-10077.030ENSXMAG00000007586-9977.030Xiphophorus_maculatus

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