EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000017849 (Gene tree)
Gene ID: -
Gene Symbol: slbp2
Alias: zgc:158856
Full Name: stem-loop binding protein 2
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7932 bases
Position: chrJH422492.1:324155-332086
Accession: ZDB-GENE-070112-1722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023335	SLBP_RNA_bind	PF15247.6	1e-30	1	1
ENSNBRP00000023361	SLBP_RNA_bind	PF15247.6	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023947	-	717	-	ENSNBRP00000023335	238 (aa)	-	-
ENSNBRT00000023974	-	810	-	ENSNBRP00000023361	269 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000017849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017849	slbp2	90	76.106	ENSAPOG00000004873	slbp2	89	76.106	Acanthochromis_polyacanthus
ENSNBRG00000017849	slbp2	96	63.300	ENSACIG00000007875	slbp2	93	63.300	Amphilophus_citrinellus
ENSNBRG00000017849	slbp2	71	77.895	ENSAOCG00000016241	slbp2	57	77.895	Amphiprion_ocellaris
ENSNBRG00000017849	slbp2	78	74.272	ENSAPEG00000008972	slbp2	99	74.272	Amphiprion_percula
ENSNBRG00000017849	slbp2	75	75.377	ENSATEG00000009765	slbp2	66	75.879	Anabas_testudineus
ENSNBRG00000017849	slbp2	75	84.000	ENSACLG00000000965	slbp2	58	84.000	Astatotilapia_calliptera
ENSNBRG00000017849	slbp2	75	84.000	ENSACLG00000001252	slbp2	58	84.000	Astatotilapia_calliptera
ENSNBRG00000017849	slbp2	83	48.148	ENSAMXG00000029210	slbp2	84	48.148	Astyanax_mexicanus
ENSNBRG00000017849	slbp2	74	41.573	ENSCAFG00000032438	SLBP2	91	42.857	Canis_familiaris
ENSNBRG00000017849	slbp2	69	43.636	ENSCAFG00020010381	-	69	43.636	Canis_lupus_dingo
ENSNBRG00000017849	slbp2	74	65.258	ENSCSEG00000006662	slbp2	59	65.258	Cynoglossus_semilaevis
ENSNBRG00000017849	slbp2	85	71.308	ENSCVAG00000003498	slbp2	84	71.308	Cyprinodon_variegatus
ENSNBRG00000017849	slbp2	76	60.500	ENSDARG00000069428	slbp2	60	60.500	Danio_rerio
ENSNBRG00000017849	slbp2	51	50.413	ENSEASG00005020781	-	72	44.737	Equus_asinus_asinus
ENSNBRG00000017849	slbp2	81	55.085	ENSELUG00000021799	slbp2	82	55.085	Esox_lucius
ENSNBRG00000017849	slbp2	69	41.916	ENSFCAG00000022610	-	70	41.916	Felis_catus
ENSNBRG00000017849	slbp2	81	59.701	ENSGMOG00000003044	slbp2	84	60.697	Gadus_morhua
ENSNBRG00000017849	slbp2	87	63.158	ENSGAFG00000009788	slbp2	95	63.158	Gambusia_affinis
ENSNBRG00000017849	slbp2	75	83.582	ENSHBUG00000019207	slbp2	58	83.582	Haplochromis_burtoni
ENSNBRG00000017849	slbp2	75	67.822	ENSHCOG00000002192	slbp2	58	67.822	Hippocampus_comes
ENSNBRG00000017849	slbp2	80	47.510	ENSIPUG00000024079	slbp2	82	47.510	Ictalurus_punctatus
ENSNBRG00000017849	slbp2	95	56.436	ENSKMAG00000005391	-	89	56.436	Kryptolebias_marmoratus
ENSNBRG00000017849	slbp2	75	75.500	ENSLBEG00000001991	slbp2	58	75.500	Labrus_bergylta
ENSNBRG00000017849	slbp2	89	72.000	ENSMAMG00000022433	slbp2	73	73.000	Mastacembelus_armatus
ENSNBRG00000017849	slbp2	75	84.000	ENSMZEG00005027825	slbp2	58	84.000	Maylandia_zebra
ENSNBRG00000017849	slbp2	63	80.000	ENSMMOG00000016838	slbp2	55	80.000	Mola_mola
ENSNBRG00000017849	slbp2	75	71.782	ENSMALG00000009687	slbp2	56	71.782	Monopterus_albus
ENSNBRG00000017849	slbp2	75	82.673	ENSONIG00000017877	slbp2	59	82.673	Oreochromis_niloticus
ENSNBRG00000017849	slbp2	75	73.869	ENSORLG00000025890	slbp2	57	73.869	Oryzias_latipes
ENSNBRG00000017849	slbp2	75	73.869	ENSORLG00020003230	slbp2	57	73.869	Oryzias_latipes_hni
ENSNBRG00000017849	slbp2	75	73.869	ENSORLG00015007694	slbp2	57	73.869	Oryzias_latipes_hsok
ENSNBRG00000017849	slbp2	75	73.367	ENSOMEG00000017456	slbp2	57	73.367	Oryzias_melastigma
ENSNBRG00000017849	slbp2	69	41.916	ENSPPRG00000024354	-	58	49.180	Panthera_pardus
ENSNBRG00000017849	slbp2	70	42.012	ENSPTIG00000005802	-	67	42.012	Panthera_tigris_altaica
ENSNBRG00000017849	slbp2	89	45.638	ENSPKIG00000008757	slbp2	94	45.329	Paramormyrops_kingsleyae
ENSNBRG00000017849	slbp2	76	64.894	ENSPMGG00000008118	slbp2	94	64.894	Periophthalmus_magnuspinnatus
ENSNBRG00000017849	slbp2	51	49.587	ENSPCIG00000015949	-	60	49.180	Phascolarctos_cinereus
ENSNBRG00000017849	slbp2	95	55.519	ENSPFOG00000021993	slbp2	99	55.519	Poecilia_formosa
ENSNBRG00000017849	slbp2	95	55.519	ENSPLAG00000019220	slbp2	89	55.519	Poecilia_latipinna
ENSNBRG00000017849	slbp2	95	55.519	ENSPLAG00000006548	-	90	55.519	Poecilia_latipinna
ENSNBRG00000017849	slbp2	95	53.247	ENSPMEG00000024341	slbp2	89	53.247	Poecilia_mexicana
ENSNBRG00000017849	slbp2	89	36.981	ENSPREG00000001384	-	88	45.098	Poecilia_reticulata
ENSNBRG00000017849	slbp2	94	91.667	ENSPNYG00000022514	slbp2	100	91.667	Pundamilia_nyererei
ENSNBRG00000017849	slbp2	68	62.983	ENSPNAG00000013685	slbp2	56	62.983	Pygocentrus_nattereri
ENSNBRG00000017849	slbp2	61	52.414	ENSSFOG00015022968	-	88	52.414	Scleropages_formosus
ENSNBRG00000017849	slbp2	88	71.429	ENSSMAG00000011121	slbp2	73	71.809	Scophthalmus_maximus
ENSNBRG00000017849	slbp2	92	60.071	ENSSDUG00000023370	slbp2	86	60.071	Seriola_dumerili
ENSNBRG00000017849	slbp2	90	79.452	ENSSLDG00000008723	slbp2	75	79.452	Seriola_lalandi_dorsalis
ENSNBRG00000017849	slbp2	75	75.393	ENSSPAG00000011574	slbp2	70	75.916	Stegastes_partitus
ENSNBRG00000017849	slbp2	60	42.657	ENSSSCG00000023691	-	69	42.657	Sus_scrofa
ENSNBRG00000017849	slbp2	95	51.935	ENSTRUG00000021937	slbp2	89	51.935	Takifugu_rubripes
ENSNBRG00000017849	slbp2	58	47.482	ENSUAMG00000000146	-	69	47.482	Ursus_americanus
ENSNBRG00000017849	slbp2	60	46.154	ENSUMAG00000016224	-	69	47.482	Ursus_maritimus
ENSNBRG00000017849	slbp2	61	46.207	ENSVVUG00000018009	-	68	46.207	Vulpes_vulpes
ENSNBRG00000017849	slbp2	52	52.756	ENSXETG00000033144	-	55	52.756	Xenopus_tropicalis
ENSNBRG00000017849	slbp2	95	55.519	ENSXMAG00000007005	slbp2	89	56.494	Xiphophorus_maculatus