EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000017855 (Gene tree)
Gene ID: 102796878
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9417 bases
Position: chrJH422299.1:374171-383587
Accession: 102796878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023349	SAP	PF02037.27	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000023983	-	1635	-	ENSNBRP00000023371	544 (aa)	-	-
ENSNBRT00000023962	-	4410	XM_006792952	ENSNBRP00000023349	798 (aa)	XP_006793015	UPI0003EC17E8

Gene Model

Click here to download ENSNBRG00000017855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000017855	hnrnpub	76	32.026	ENSNBRG00000000429	si:ch211-107m4.1	59	37.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017855	hnrnpub	85	83.333	ENSG00000153187	HNRNPU	80	83.333	Homo_sapiens
ENSNBRG00000017855	hnrnpub	100	86.121	ENSAPOG00000017400	hnrnpub	100	85.608	Acanthochromis_polyacanthus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSAMEG00000009145	HNRNPU	76	83.333	Ailuropoda_melanoleuca
ENSNBRG00000017855	hnrnpub	100	84.481	ENSACIG00000012138	hnrnpub	96	91.028	Amphilophus_citrinellus
ENSNBRG00000017855	hnrnpub	100	87.856	ENSAOCG00000015843	hnrnpub	100	86.849	Amphiprion_ocellaris
ENSNBRG00000017855	hnrnpub	100	87.856	ENSAPEG00000014679	hnrnpub	100	86.849	Amphiprion_percula
ENSNBRG00000017855	hnrnpub	98	87.218	ENSATEG00000016178	hnrnpub	97	85.804	Anabas_testudineus
ENSNBRG00000017855	hnrnpub	86	73.810	ENSACAG00000004511	HNRNPU	77	73.810	Anolis_carolinensis
ENSNBRG00000017855	hnrnpub	80	56.942	ENSANAG00000033895	-	80	83.333	Aotus_nancymaae
ENSNBRG00000017855	hnrnpub	100	99.123	ENSACLG00000008165	hnrnpub	100	99.123	Astatotilapia_calliptera
ENSNBRG00000017855	hnrnpub	85	83.333	ENSBTAG00000007606	HNRNPU	78	83.333	Bos_taurus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSCJAG00000016914	HNRNPU	78	83.333	Callithrix_jacchus
ENSNBRG00000017855	hnrnpub	80	57.433	ENSCAFG00020000918	HNRNPU	75	57.035	Canis_lupus_dingo
ENSNBRG00000017855	hnrnpub	80	57.277	ENSCHIG00000004900	HNRNPU	80	83.333	Capra_hircus
ENSNBRG00000017855	hnrnpub	85	85.714	ENSCPOG00000011887	HNRNPU	78	85.714	Cavia_porcellus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSCCAG00000037859	-	78	83.333	Cebus_capucinus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSCATG00000035273	HNRNPU	78	83.333	Cercocebus_atys
ENSNBRG00000017855	hnrnpub	85	85.714	ENSCLAG00000007100	HNRNPU	78	85.714	Chinchilla_lanigera
ENSNBRG00000017855	hnrnpub	80	56.942	ENSCSAG00000009219	HNRNPU	75	57.035	Chlorocebus_sabaeus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSCHOG00000001387	HNRNPU	76	83.333	Choloepus_hoffmanni
ENSNBRG00000017855	hnrnpub	96	56.146	ENSCPBG00000009415	HNRNPU	79	66.102	Chrysemys_picta_bellii
ENSNBRG00000017855	hnrnpub	85	83.333	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSNBRG00000017855	hnrnpub	86	78.723	ENSCGRG00001020525	Hnrnpu	77	78.723	Cricetulus_griseus_chok1gshd
ENSNBRG00000017855	hnrnpub	100	77.365	ENSCSEG00000010804	hnrnpub	100	79.401	Cynoglossus_semilaevis
ENSNBRG00000017855	hnrnpub	92	81.481	ENSCVAG00000004280	hnrnpub	100	70.665	Cyprinodon_variegatus
ENSNBRG00000017855	hnrnpub	100	60.848	ENSDARG00000015206	hnrnpua	100	59.057	Danio_rerio
ENSNBRG00000017855	hnrnpub	100	60.749	ENSDARG00000004735	hnrnpub	83	63.783	Danio_rerio
ENSNBRG00000017855	hnrnpub	99	51.875	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSNBRG00000017855	hnrnpub	80	55.927	ENSDORG00000015491	Hnrnpu	74	57.944	Dipodomys_ordii
ENSNBRG00000017855	hnrnpub	85	83.333	ENSETEG00000014565	HNRNPU	78	83.333	Echinops_telfairi
ENSNBRG00000017855	hnrnpub	81	57.077	ENSEASG00005003017	HNRNPU	75	56.992	Equus_asinus_asinus
ENSNBRG00000017855	hnrnpub	81	56.923	ENSECAG00000007955	HNRNPU	75	56.842	Equus_caballus
ENSNBRG00000017855	hnrnpub	100	72.813	ENSELUG00000010733	hnrnpub	100	72.824	Esox_lucius
ENSNBRG00000017855	hnrnpub	80	55.623	ENSFCAG00000002156	HNRNPU	74	57.035	Felis_catus
ENSNBRG00000017855	hnrnpub	94	60.526	ENSFDAG00000006026	HNRNPU	99	85.714	Fukomys_damarensis
ENSNBRG00000017855	hnrnpub	100	80.266	ENSFHEG00000022639	hnrnpub	100	80.630	Fundulus_heteroclitus
ENSNBRG00000017855	hnrnpub	100	72.048	ENSGMOG00000001755	hnrnpub	99	71.515	Gadus_morhua
ENSNBRG00000017855	hnrnpub	73	68.966	ENSGALG00000010671	HNRNPU	78	68.966	Gallus_gallus
ENSNBRG00000017855	hnrnpub	100	80.144	ENSGAFG00000009369	hnrnpub	100	79.712	Gambusia_affinis
ENSNBRG00000017855	hnrnpub	100	74.883	ENSGACG00000004679	hnrnpub	99	75.117	Gasterosteus_aculeatus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSGGOG00000004061	HNRNPU	78	83.333	Gorilla_gorilla
ENSNBRG00000017855	hnrnpub	100	99.123	ENSHBUG00000012290	hnrnpub	100	99.123	Haplochromis_burtoni
ENSNBRG00000017855	hnrnpub	85	85.714	ENSHGLG00000010594	-	76	85.714	Heterocephalus_glaber_female
ENSNBRG00000017855	hnrnpub	92	85.714	ENSHGLG00100015093	HNRNPU	99	74.138	Heterocephalus_glaber_male
ENSNBRG00000017855	hnrnpub	85	76.968	ENSHCOG00000020091	hnrnpub	100	74.548	Hippocampus_comes
ENSNBRG00000017855	hnrnpub	80	91.304	ENSIPUG00000007749	hnrnpu	93	78.947	Ictalurus_punctatus
ENSNBRG00000017855	hnrnpub	86	78.723	ENSJJAG00000011371	Hnrnpu	79	78.723	Jaculus_jaculus
ENSNBRG00000017855	hnrnpub	100	82.274	ENSKMAG00000004532	hnrnpub	100	82.274	Kryptolebias_marmoratus
ENSNBRG00000017855	hnrnpub	100	83.374	ENSLBEG00000022520	hnrnpub	100	85.086	Labrus_bergylta
ENSNBRG00000017855	hnrnpub	81	52.816	ENSLACG00000017463	HNRNPU	80	82.609	Latimeria_chalumnae
ENSNBRG00000017855	hnrnpub	88	93.478	ENSLOCG00000016652	hnrnpua	78	93.478	Lepisosteus_oculatus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSLAFG00000021377	HNRNPU	81	83.333	Loxodonta_africana
ENSNBRG00000017855	hnrnpub	85	83.333	ENSMFAG00000037308	HNRNPU	78	83.333	Macaca_fascicularis
ENSNBRG00000017855	hnrnpub	80	56.942	ENSMMUG00000021098	HNRNPU	75	57.035	Macaca_mulatta
ENSNBRG00000017855	hnrnpub	85	83.333	ENSMNEG00000043645	HNRNPU	78	83.333	Macaca_nemestrina
ENSNBRG00000017855	hnrnpub	100	87.005	ENSMAMG00000007196	hnrnpub	100	86.881	Mastacembelus_armatus
ENSNBRG00000017855	hnrnpub	100	99.123	ENSMZEG00005003185	hnrnpub	100	99.123	Maylandia_zebra
ENSNBRG00000017855	hnrnpub	88	78.723	ENSMAUG00000008842	Hnrnpu	82	78.723	Mesocricetus_auratus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSMICG00000004616	HNRNPU	78	83.333	Microcebus_murinus
ENSNBRG00000017855	hnrnpub	88	78.723	ENSMOCG00000015623	Hnrnpu	79	78.723	Microtus_ochrogaster
ENSNBRG00000017855	hnrnpub	85	83.333	ENSMODG00000006515	HNRNPU	77	83.333	Monodelphis_domestica
ENSNBRG00000017855	hnrnpub	96	86.934	ENSMALG00000018243	hnrnpub	98	86.122	Monopterus_albus
ENSNBRG00000017855	hnrnpub	86	78.723	MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	Mus_caroli
ENSNBRG00000017855	hnrnpub	86	78.723	ENSMUSG00000039630	Hnrnpu	79	78.723	Mus_musculus
ENSNBRG00000017855	hnrnpub	85	80.952	ENSMLUG00000000475	HNRNPU	80	77.083	Myotis_lucifugus
ENSNBRG00000017855	hnrnpub	80	56.079	ENSNGAG00000019075	Hnrnpu	75	57.186	Nannospalax_galili
ENSNBRG00000017855	hnrnpub	78	83.333	ENSMEUG00000000541	HNRNPU	90	83.333	Notamacropus_eugenii
ENSNBRG00000017855	hnrnpub	100	95.238	ENSONIG00000001260	hnrnpub	100	95.238	Oreochromis_niloticus
ENSNBRG00000017855	hnrnpub	83	83.333	ENSOCUG00000014469	HNRNPU	69	83.333	Oryctolagus_cuniculus
ENSNBRG00000017855	hnrnpub	100	82.077	ENSORLG00000016114	hnrnpub	100	82.447	Oryzias_latipes
ENSNBRG00000017855	hnrnpub	100	81.289	ENSORLG00020005363	hnrnpub	100	82.818	Oryzias_latipes_hni
ENSNBRG00000017855	hnrnpub	100	81.165	ENSORLG00015001190	hnrnpub	100	82.695	Oryzias_latipes_hsok
ENSNBRG00000017855	hnrnpub	100	81.908	ENSOMEG00000014951	hnrnpub	100	82.200	Oryzias_melastigma
ENSNBRG00000017855	hnrnpub	80	57.590	ENSOGAG00000014024	HNRNPU	80	83.333	Otolemur_garnettii
ENSNBRG00000017855	hnrnpub	85	83.333	ENSOARG00000004985	HNRNPU	85	83.333	Ovis_aries
ENSNBRG00000017855	hnrnpub	85	83.333	ENSPPAG00000038652	HNRNPU	81	83.333	Pan_paniscus
ENSNBRG00000017855	hnrnpub	87	83.333	ENSPPRG00000002662	HNRNPU	78	83.333	Panthera_pardus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSPTRG00000002182	HNRNPU	81	83.333	Pan_troglodytes
ENSNBRG00000017855	hnrnpub	80	56.942	ENSPANG00000011643	HNRNPU	79	59.897	Papio_anubis
ENSNBRG00000017855	hnrnpub	100	68.485	ENSPKIG00000022332	hnrnpub	100	66.952	Paramormyrops_kingsleyae
ENSNBRG00000017855	hnrnpub	100	67.032	ENSPKIG00000006885	hnrnpua	100	65.371	Paramormyrops_kingsleyae
ENSNBRG00000017855	hnrnpub	85	83.333	ENSPCIG00000008657	HNRNPU	77	83.333	Phascolarctos_cinereus
ENSNBRG00000017855	hnrnpub	100	81.585	ENSPFOG00000002908	hnrnpub	100	82.195	Poecilia_formosa
ENSNBRG00000017855	hnrnpub	100	81.098	ENSPLAG00000004160	hnrnpub	100	81.951	Poecilia_latipinna
ENSNBRG00000017855	hnrnpub	85	83.333	ENSPCOG00000018655	-	80	83.333	Propithecus_coquereli
ENSNBRG00000017855	hnrnpub	80	56.025	ENSPCOG00000003883	-	77	55.891	Propithecus_coquereli
ENSNBRG00000017855	hnrnpub	85	83.333	ENSPVAG00000002581	HNRNPU	78	83.333	Pteropus_vampyrus
ENSNBRG00000017855	hnrnpub	100	99.248	ENSPNYG00000021642	hnrnpub	100	99.248	Pundamilia_nyererei
ENSNBRG00000017855	hnrnpub	100	66.707	ENSPNAG00000001055	hnrnpub	100	66.135	Pygocentrus_nattereri
ENSNBRG00000017855	hnrnpub	80	52.761	ENSRNOG00000033790	Hnrnpu	75	57.337	Rattus_norvegicus
ENSNBRG00000017855	hnrnpub	80	56.318	ENSRBIG00000031519	HNRNPU	78	59.208	Rhinopithecus_bieti
ENSNBRG00000017855	hnrnpub	82	55.958	ENSRROG00000041642	HNRNPU	76	61.023	Rhinopithecus_roxellana
ENSNBRG00000017855	hnrnpub	100	68.364	ENSSFOG00015001124	hnrnpub	82	72.607	Scleropages_formosus
ENSNBRG00000017855	hnrnpub	100	66.102	ENSSFOG00015019004	hnrnpu	99	63.233	Scleropages_formosus
ENSNBRG00000017855	hnrnpub	100	80.380	ENSSMAG00000003607	hnrnpub	100	81.926	Scophthalmus_maximus
ENSNBRG00000017855	hnrnpub	100	87.010	ENSSDUG00000005912	hnrnpub	100	87.745	Seriola_dumerili
ENSNBRG00000017855	hnrnpub	100	86.691	ENSSLDG00000004899	hnrnpub	100	86.569	Seriola_lalandi_dorsalis
ENSNBRG00000017855	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	89	58.182	Sphenodon_punctatus
ENSNBRG00000017855	hnrnpub	100	87.097	ENSSPAG00000011853	hnrnpub	100	86.725	Stegastes_partitus
ENSNBRG00000017855	hnrnpub	85	83.333	ENSSSCG00000010877	HNRNPU	78	83.333	Sus_scrofa
ENSNBRG00000017855	hnrnpub	100	77.886	ENSTRUG00000007759	hnrnpub	100	78.999	Takifugu_rubripes
ENSNBRG00000017855	hnrnpub	85	83.333	ENSUAMG00000021120	HNRNPU	78	83.333	Ursus_americanus
ENSNBRG00000017855	hnrnpub	85	74.419	ENSUMAG00000012322	HNRNPU	83	74.419	Ursus_maritimus
ENSNBRG00000017855	hnrnpub	78	83.333	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSNBRG00000017855	hnrnpub	80	57.433	ENSVVUG00000026524	HNRNPU	75	57.035	Vulpes_vulpes
ENSNBRG00000017855	hnrnpub	99	49.882	ENSXETG00000011386	hnrnpu	77	54.050	Xenopus_tropicalis
ENSNBRG00000017855	hnrnpub	100	82.927	ENSXMAG00000010356	hnrnpub	100	83.415	Xiphophorus_maculatus