EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000017878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:ch1073-415n3.1
Full Name: tudor domain-containing protein 12-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 10344 bases
Position: chrJH422385.1:1306724-1317067
Accession: 102781410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023434	TUDOR	PF00567.24	7e-14	1	1
ENSNBRP00000023403	TUDOR	PF00567.24	1.2e-11	1	1
ENSNBRP00000023434	DEAD	PF00270.29	2.9e-06	1	1
ENSNBRP00000023403	DEAD	PF00270.29	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000024048	-	2103	XM_006803962	ENSNBRP00000023434	700 (aa)	XP_006804025	-
ENSNBRT00000024017	-	2262	-	ENSNBRP00000023403	753 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000017878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000017878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000017878	-	99	73.011	ENSAPOG00000006421	tdrd12	69	73.011	Acanthochromis_polyacanthus
ENSNBRG00000017878	-	95	45.147	ENSAMEG00000015440	-	83	45.147	Ailuropoda_melanoleuca
ENSNBRG00000017878	-	99	77.175	ENSACIG00000021652	tdrd12	70	77.175	Amphilophus_citrinellus
ENSNBRG00000017878	-	99	68.156	ENSAOCG00000016463	tdrd12	60	68.156	Amphiprion_ocellaris
ENSNBRG00000017878	-	100	71.955	ENSAPEG00000015105	tdrd12	69	71.955	Amphiprion_percula
ENSNBRG00000017878	-	99	72.675	ENSATEG00000011608	tdrd12	71	72.675	Anabas_testudineus
ENSNBRG00000017878	-	91	42.593	ENSAPLG00000011417	-	60	42.593	Anas_platyrhynchos
ENSNBRG00000017878	-	91	42.615	ENSACAG00000029615	-	68	42.615	Anolis_carolinensis
ENSNBRG00000017878	-	94	43.407	ENSANAG00000023166	-	60	42.454	Aotus_nancymaae
ENSNBRG00000017878	-	99	52.266	ENSAMXG00000013811	tdrd12	70	52.266	Astyanax_mexicanus
ENSNBRG00000017878	-	95	43.088	ENSCJAG00000000763	-	60	42.433	Callithrix_jacchus
ENSNBRG00000017878	-	97	43.795	ENSCAFG00000007505	TDRD12	58	41.026	Canis_familiaris
ENSNBRG00000017878	-	97	43.795	ENSCAFG00020019790	-	59	42.817	Canis_lupus_dingo
ENSNBRG00000017878	-	97	42.651	ENSTSYG00000012034	-	59	42.651	Carlito_syrichta
ENSNBRG00000017878	-	81	44.518	ENSCPOG00000002876	-	52	41.392	Cavia_porcellus
ENSNBRG00000017878	-	95	43.088	ENSCCAG00000037592	-	62	42.313	Cebus_capucinus
ENSNBRG00000017878	-	95	42.500	ENSCATG00000038627	-	62	41.808	Cercocebus_atys
ENSNBRG00000017878	-	97	42.363	ENSCLAG00000012138	-	54	42.363	Chinchilla_lanigera
ENSNBRG00000017878	-	95	43.382	ENSCSAG00000004794	-	58	43.382	Chlorocebus_sabaeus
ENSNBRG00000017878	-	92	44.848	ENSCPBG00000000147	-	67	42.090	Chrysemys_picta_bellii
ENSNBRG00000017878	-	95	41.543	ENSCANG00000040785	-	59	42.525	Colobus_angolensis_palliatus
ENSNBRG00000017878	-	79	45.574	ENSCGRG00001021407	-	52	42.424	Cricetulus_griseus_chok1gshd
ENSNBRG00000017878	-	79	45.246	ENSCGRG00000007286	-	52	40.331	Cricetulus_griseus_crigri
ENSNBRG00000017878	-	98	64.841	ENSCSEG00000001744	-	55	64.841	Cynoglossus_semilaevis
ENSNBRG00000017878	-	92	64.625	ENSCVAG00000004277	tdrd12	89	64.625	Cyprinodon_variegatus
ENSNBRG00000017878	-	99	53.295	ENSDARG00000075217	tdrd12	65	51.240	Danio_rerio
ENSNBRG00000017878	-	93	44.495	ENSDNOG00000017244	-	51	44.495	Dasypus_novemcinctus
ENSNBRG00000017878	-	79	47.712	ENSDORG00000012134	-	50	42.857	Dipodomys_ordii
ENSNBRG00000017878	-	66	40.506	ENSETEG00000015088	-	52	40.506	Echinops_telfairi
ENSNBRG00000017878	-	95	42.857	ENSEASG00005021053	-	51	42.857	Equus_asinus_asinus
ENSNBRG00000017878	-	95	43.446	ENSEEUG00000008457	-	62	43.446	Erinaceus_europaeus
ENSNBRG00000017878	-	99	57.183	ENSELUG00000017494	tdrd12	59	55.682	Esox_lucius
ENSNBRG00000017878	-	95	37.865	ENSFALG00000000259	-	54	37.865	Ficedula_albicollis
ENSNBRG00000017878	-	85	42.125	ENSFDAG00000014797	-	56	42.125	Fukomys_damarensis
ENSNBRG00000017878	-	91	34.504	ENSGALG00000004704	-	53	37.061	Gallus_gallus
ENSNBRG00000017878	-	99	69.943	ENSGAFG00000003729	tdrd12	52	69.943	Gambusia_affinis
ENSNBRG00000017878	-	94	44.395	ENSGAGG00000000247	-	64	44.395	Gopherus_agassizii
ENSNBRG00000017878	-	95	42.794	ENSGGOG00000011938	-	61	42.373	Gorilla_gorilla
ENSNBRG00000017878	-	100	94.595	ENSHBUG00000020426	tdrd12	72	94.595	Haplochromis_burtoni
ENSNBRG00000017878	-	82	42.415	ENSHGLG00000015608	-	53	41.353	Heterocephalus_glaber_female
ENSNBRG00000017878	-	95	42.857	ENSHGLG00100008227	-	62	42.857	Heterocephalus_glaber_male
ENSNBRG00000017878	-	99	52.806	ENSIPUG00000016825	tdrd12	53	52.806	Ictalurus_punctatus
ENSNBRG00000017878	-	83	45.364	ENSSTOG00000013638	-	50	45.364	Ictidomys_tridecemlineatus
ENSNBRG00000017878	-	94	66.667	ENSKMAG00000008031	tdrd12	78	66.667	Kryptolebias_marmoratus
ENSNBRG00000017878	-	99	68.857	ENSLBEG00000005601	tdrd12	69	68.857	Labrus_bergylta
ENSNBRG00000017878	-	92	45.468	ENSLACG00000010650	-	60	45.468	Latimeria_chalumnae
ENSNBRG00000017878	-	98	50.776	ENSLOCG00000001690	tdrd12	52	50.776	Lepisosteus_oculatus
ENSNBRG00000017878	-	95	43.172	ENSLAFG00000008698	-	61	43.304	Loxodonta_africana
ENSNBRG00000017878	-	95	42.941	ENSMFAG00000044756	-	60	42.090	Macaca_fascicularis
ENSNBRG00000017878	-	95	42.941	ENSMMUG00000015608	-	61	42.090	Macaca_mulatta
ENSNBRG00000017878	-	95	42.941	ENSMNEG00000043067	-	61	41.949	Macaca_nemestrina
ENSNBRG00000017878	-	89	44.244	ENSMLEG00000042036	-	61	43.094	Mandrillus_leucophaeus
ENSNBRG00000017878	-	99	68.857	ENSMAMG00000013867	tdrd12	66	68.857	Mastacembelus_armatus
ENSNBRG00000017878	-	94	94.277	ENSMZEG00005024214	tdrd12	67	94.277	Maylandia_zebra
ENSNBRG00000017878	-	91	42.000	ENSMGAG00000005627	-	94	42.000	Meleagris_gallopavo
ENSNBRG00000017878	-	82	45.484	ENSMAUG00000013767	-	53	41.667	Mesocricetus_auratus
ENSNBRG00000017878	-	95	43.906	ENSMICG00000003623	-	60	43.906	Microcebus_murinus
ENSNBRG00000017878	-	93	44.880	ENSMOCG00000002366	-	61	44.880	Microtus_ochrogaster
ENSNBRG00000017878	-	98	68.642	ENSMMOG00000018662	tdrd12	68	68.642	Mola_mola
ENSNBRG00000017878	-	93	43.223	ENSMODG00000012286	-	55	40.443	Monodelphis_domestica
ENSNBRG00000017878	-	99	65.805	ENSMALG00000006918	tdrd12	60	65.805	Monopterus_albus
ENSNBRG00000017878	-	95	44.868	MGP_CAROLIEiJ_G0029587	-	65	43.015	Mus_caroli
ENSNBRG00000017878	-	95	44.330	MGP_PahariEiJ_G0012821	-	64	42.061	Mus_pahari
ENSNBRG00000017878	-	95	44.282	MGP_SPRETEiJ_G0030686	-	64	42.877	Mus_spretus
ENSNBRG00000017878	-	95	43.906	ENSMPUG00000007791	-	55	41.690	Mustela_putorius_furo
ENSNBRG00000017878	-	81	44.408	ENSMLUG00000010694	-	58	44.408	Myotis_lucifugus
ENSNBRG00000017878	-	79	45.902	ENSNGAG00000000793	-	52	40.974	Nannospalax_galili
ENSNBRG00000017878	-	95	41.802	ENSNLEG00000007635	-	61	41.243	Nomascus_leucogenys
ENSNBRG00000017878	-	85	44.972	ENSOPRG00000015809	-	55	44.972	Ochotona_princeps
ENSNBRG00000017878	-	81	44.186	ENSODEG00000014443	-	54	41.155	Octodon_degus
ENSNBRG00000017878	-	94	93.171	ENSONIG00000010630	tdrd12	62	93.171	Oreochromis_niloticus
ENSNBRG00000017878	-	66	45.011	ENSOANG00000029707	-	69	45.011	Ornithorhynchus_anatinus
ENSNBRG00000017878	-	98	61.483	ENSORLG00000027859	tdrd12	60	61.483	Oryzias_latipes
ENSNBRG00000017878	-	99	62.108	ENSORLG00015020835	tdrd12	50	62.108	Oryzias_latipes_hsok
ENSNBRG00000017878	-	98	63.043	ENSOMEG00000021862	tdrd12	67	63.043	Oryzias_melastigma
ENSNBRG00000017878	-	98	43.670	ENSOGAG00000001571	-	64	43.670	Otolemur_garnettii
ENSNBRG00000017878	-	95	44.100	ENSOARG00000004254	-	56	41.975	Ovis_aries
ENSNBRG00000017878	-	95	42.857	ENSPPAG00000042284	-	60	42.291	Pan_paniscus
ENSNBRG00000017878	-	97	44.236	ENSPPRG00000002389	-	61	43.521	Panthera_pardus
ENSNBRG00000017878	-	95	43.382	ENSPTRG00000010795	TDRD12	62	42.797	Pan_troglodytes
ENSNBRG00000017878	-	95	42.794	ENSPANG00000001203	-	60	42.090	Papio_anubis
ENSNBRG00000017878	-	99	52.367	ENSPKIG00000006407	tdrd12	50	52.367	Paramormyrops_kingsleyae
ENSNBRG00000017878	-	77	45.724	ENSPSIG00000012970	-	55	45.724	Pelodiscus_sinensis
ENSNBRG00000017878	-	98	63.623	ENSPMGG00000022691	tdrd12	70	63.623	Periophthalmus_magnuspinnatus
ENSNBRG00000017878	-	95	44.135	ENSPEMG00000009233	-	60	44.135	Peromyscus_maniculatus_bairdii
ENSNBRG00000017878	-	93	42.814	ENSPCIG00000020993	-	52	42.814	Phascolarctos_cinereus
ENSNBRG00000017878	-	99	67.364	ENSPFOG00000008184	tdrd12	52	67.364	Poecilia_formosa
ENSNBRG00000017878	-	65	68.777	ENSPMEG00000006420	tdrd12	59	68.777	Poecilia_mexicana
ENSNBRG00000017878	-	99	68.661	ENSPREG00000004916	tdrd12	64	68.661	Poecilia_reticulata
ENSNBRG00000017878	-	95	42.941	ENSPPYG00000009821	-	57	42.941	Pongo_abelii
ENSNBRG00000017878	-	95	43.088	ENSPCOG00000023600	-	59	43.088	Propithecus_coquereli
ENSNBRG00000017878	-	95	37.445	ENSPVAG00000014599	-	61	37.445	Pteropus_vampyrus
ENSNBRG00000017878	-	100	94.595	ENSPNYG00000022866	tdrd12	70	94.595	Pundamilia_nyererei
ENSNBRG00000017878	-	99	54.339	ENSPNAG00000003413	tdrd12	68	54.161	Pygocentrus_nattereri
ENSNBRG00000017878	-	95	44.135	ENSRNOG00000012719	Tdrd12	55	42.265	Rattus_norvegicus
ENSNBRG00000017878	-	95	42.020	ENSRBIG00000019899	-	64	41.234	Rhinopithecus_bieti
ENSNBRG00000017878	-	95	42.647	ENSRROG00000036351	-	60	41.808	Rhinopithecus_roxellana
ENSNBRG00000017878	-	95	43.529	ENSSBOG00000034916	-	60	42.757	Saimiri_boliviensis_boliviensis
ENSNBRG00000017878	-	93	42.643	ENSSHAG00000002599	-	60	42.643	Sarcophilus_harrisii
ENSNBRG00000017878	-	86	50.571	ENSSFOG00015000297	tdrd12	57	50.571	Scleropages_formosus
ENSNBRG00000017878	-	99	72.507	ENSSMAG00000002870	tdrd12	68	72.507	Scophthalmus_maximus
ENSNBRG00000017878	-	98	73.487	ENSSDUG00000017304	tdrd12	70	73.487	Seriola_dumerili
ENSNBRG00000017878	-	98	73.199	ENSSLDG00000004415	tdrd12	71	73.199	Seriola_lalandi_dorsalis
ENSNBRG00000017878	-	76	45.173	ENSSARG00000005357	-	61	40.663	Sorex_araneus
ENSNBRG00000017878	-	92	44.377	ENSSPUG00000013174	-	64	44.377	Sphenodon_punctatus
ENSNBRG00000017878	-	98	67.249	ENSSPAG00000005706	tdrd12	75	61.528	Stegastes_partitus
ENSNBRG00000017878	-	97	42.795	ENSSSCG00000002857	-	68	42.795	Sus_scrofa
ENSNBRG00000017878	-	90	37.750	ENSTGUG00000009121	-	98	37.750	Taeniopygia_guttata
ENSNBRG00000017878	-	99	56.392	ENSTRUG00000021888	tdrd12	73	56.392	Takifugu_rubripes
ENSNBRG00000017878	-	87	50.000	ENSTBEG00000007609	-	57	50.000	Tupaia_belangeri
ENSNBRG00000017878	-	94	44.395	ENSTTRG00000012206	-	62	44.395	Tursiops_truncatus
ENSNBRG00000017878	-	95	44.200	ENSUAMG00000007298	-	58	44.200	Ursus_americanus
ENSNBRG00000017878	-	95	44.347	ENSUMAG00000014314	-	58	44.347	Ursus_maritimus
ENSNBRG00000017878	-	89	38.776	ENSVPAG00000012051	-	61	38.776	Vicugna_pacos
ENSNBRG00000017878	-	97	43.652	ENSVVUG00000016637	-	58	41.588	Vulpes_vulpes
ENSNBRG00000017878	-	84	40.328	ENSXETG00000031945	-	67	40.728	Xenopus_tropicalis
ENSNBRG00000017878	-	99	69.844	ENSXMAG00000020908	tdrd12	71	69.844	Xiphophorus_maculatus