EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000018065 (Gene tree)
Gene ID: 102779055
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 200604 bases
Position: chrJH422285.1:9823561-10024164
Accession: 102779055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023619	RRM_1	PF00076.22	2.5e-31	1	2
ENSNBRP00000023619	RRM_1	PF00076.22	2.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000024233	-	1248	XM_006788037	ENSNBRP00000023619	415 (aa)	XP_006788100	UPI0003EC2631

Gene Model

Click here to download ENSNBRG00000018065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000018065	-	84	71.989	ENSNBRG00000017934	rbms2b	92	73.900
ENSNBRG00000018065	-	87	74.247	ENSNBRG00000019651	rbms2a	89	73.475
ENSNBRG00000018065	-	88	65.676	ENSNBRG00000015151	RBMS1	95	64.987
ENSNBRG00000018065	-	72	62.458	ENSNBRG00000020217	rbms1a	87	62.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000018065	-	99	88.333	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSNBRG00000018065	-	99	73.961	ENSAPOG00000007266	rbms3	93	81.818	Acanthochromis_polyacanthus
ENSNBRG00000018065	-	100	98.798	ENSAPOG00000003432	-	100	98.798	Acanthochromis_polyacanthus
ENSNBRG00000018065	-	69	84.158	ENSAMEG00000005947	RBMS3	99	84.158	Ailuropoda_melanoleuca
ENSNBRG00000018065	-	87	74.521	ENSACIG00000021113	RBMS3	95	74.795	Amphilophus_citrinellus
ENSNBRG00000018065	-	78	96.626	ENSACIG00000006987	-	89	96.626	Amphilophus_citrinellus
ENSNBRG00000018065	-	100	91.264	ENSAOCG00000024104	-	100	91.264	Amphiprion_ocellaris
ENSNBRG00000018065	-	99	82.160	ENSAOCG00000021274	rbms3	99	82.160	Amphiprion_ocellaris
ENSNBRG00000018065	-	100	90.602	ENSAPEG00000009481	-	100	90.602	Amphiprion_percula
ENSNBRG00000018065	-	82	83.239	ENSAPEG00000016299	rbms3	87	86.446	Amphiprion_percula
ENSNBRG00000018065	-	99	82.783	ENSATEG00000024295	rbms3	99	83.019	Anabas_testudineus
ENSNBRG00000018065	-	100	98.558	ENSATEG00000008433	-	100	98.558	Anabas_testudineus
ENSNBRG00000018065	-	99	85.185	ENSAPLG00000012270	RBMS3	99	84.491	Anas_platyrhynchos
ENSNBRG00000018065	-	99	87.589	ENSACAG00000028664	RBMS3	99	87.589	Anolis_carolinensis
ENSNBRG00000018065	-	99	85.681	ENSANAG00000021899	RBMS3	99	85.681	Aotus_nancymaae
ENSNBRG00000018065	-	99	82.033	ENSACLG00000018506	rbms3	99	82.270	Astatotilapia_calliptera
ENSNBRG00000018065	-	98	96.806	ENSACLG00000008976	-	94	91.096	Astatotilapia_calliptera
ENSNBRG00000018065	-	99	90.580	ENSAMXG00000020388	rbms3	99	90.580	Astyanax_mexicanus
ENSNBRG00000018065	-	62	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSNBRG00000018065	-	99	88.333	ENSBTAG00000044062	RBMS3	99	88.333	Bos_taurus
ENSNBRG00000018065	-	99	85.681	ENSCJAG00000004312	RBMS3	99	85.681	Callithrix_jacchus
ENSNBRG00000018065	-	99	85.092	ENSCAFG00000005464	RBMS3	99	85.092	Canis_familiaris
ENSNBRG00000018065	-	99	85.092	ENSCAFG00020024980	RBMS3	99	85.092	Canis_lupus_dingo
ENSNBRG00000018065	-	99	88.333	ENSCHIG00000009144	RBMS3	99	88.333	Capra_hircus
ENSNBRG00000018065	-	76	85.758	ENSTSYG00000002615	RBMS3	99	85.758	Carlito_syrichta
ENSNBRG00000018065	-	88	83.288	ENSCAPG00000017783	RBMS3	95	82.574	Cavia_aperea
ENSNBRG00000018065	-	99	88.675	ENSCPOG00000006457	RBMS3	99	88.675	Cavia_porcellus
ENSNBRG00000018065	-	99	85.681	ENSCCAG00000008671	RBMS3	99	85.681	Cebus_capucinus
ENSNBRG00000018065	-	100	85.321	ENSCATG00000013222	RBMS3	100	85.321	Cercocebus_atys
ENSNBRG00000018065	-	99	87.857	ENSCLAG00000005866	RBMS3	99	87.857	Chinchilla_lanigera
ENSNBRG00000018065	-	65	87.778	ENSCSAG00000009655	RBMS3	99	87.778	Chlorocebus_sabaeus
ENSNBRG00000018065	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSNBRG00000018065	-	99	87.828	ENSCPBG00000022678	RBMS3	99	87.828	Chrysemys_picta_bellii
ENSNBRG00000018065	-	99	85.450	ENSCANG00000032137	RBMS3	99	85.450	Colobus_angolensis_palliatus
ENSNBRG00000018065	-	99	86.506	ENSCGRG00001007243	Rbms3	99	86.506	Cricetulus_griseus_chok1gshd
ENSNBRG00000018065	-	99	86.506	ENSCGRG00000004599	Rbms3	99	86.506	Cricetulus_griseus_crigri
ENSNBRG00000018065	-	100	96.635	ENSCSEG00000014677	-	94	100.000	Cynoglossus_semilaevis
ENSNBRG00000018065	-	99	81.882	ENSCSEG00000010011	RBMS3	99	82.118	Cynoglossus_semilaevis
ENSNBRG00000018065	-	99	83.333	ENSCVAG00000022354	rbms3	99	83.333	Cyprinodon_variegatus
ENSNBRG00000018065	-	100	98.082	ENSCVAG00000022814	-	100	98.172	Cyprinodon_variegatus
ENSNBRG00000018065	-	99	90.097	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSNBRG00000018065	-	99	87.857	ENSDNOG00000016645	RBMS3	96	87.857	Dasypus_novemcinctus
ENSNBRG00000018065	-	99	87.143	ENSDORG00000007220	Rbms3	99	87.143	Dipodomys_ordii
ENSNBRG00000018065	-	87	83.333	ENSETEG00000009485	-	80	70.571	Echinops_telfairi
ENSNBRG00000018065	-	67	54.317	ENSEBUG00000005830	rbms3	86	55.472	Eptatretus_burgeri
ENSNBRG00000018065	-	99	88.095	ENSEASG00005006152	RBMS3	99	88.095	Equus_asinus_asinus
ENSNBRG00000018065	-	99	88.095	ENSECAG00000017871	RBMS3	99	88.095	Equus_caballus
ENSNBRG00000018065	-	90	79.293	ENSEEUG00000014337	RBMS3	100	79.293	Erinaceus_europaeus
ENSNBRG00000018065	-	92	95.288	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSNBRG00000018065	-	99	79.905	ENSELUG00000002862	rbms3	99	79.905	Esox_lucius
ENSNBRG00000018065	-	99	87.857	ENSFCAG00000002130	RBMS3	99	87.857	Felis_catus
ENSNBRG00000018065	-	99	88.067	ENSFALG00000009165	RBMS3	99	88.067	Ficedula_albicollis
ENSNBRG00000018065	-	99	87.619	ENSFDAG00000008278	RBMS3	99	87.619	Fukomys_damarensis
ENSNBRG00000018065	-	95	69.383	ENSFHEG00000004787	RBMS3	94	75.749	Fundulus_heteroclitus
ENSNBRG00000018065	-	90	88.917	ENSGMOG00000002600	-	96	88.917	Gadus_morhua
ENSNBRG00000018065	-	99	88.067	ENSGALG00000011439	RBMS3	99	88.067	Gallus_gallus
ENSNBRG00000018065	-	99	82.898	ENSGAFG00000000168	rbms3	99	82.898	Gambusia_affinis
ENSNBRG00000018065	-	100	98.321	ENSGAFG00000003329	-	100	98.321	Gambusia_affinis
ENSNBRG00000018065	-	65	86.716	ENSGAGG00000004039	RBMS3	99	86.716	Gopherus_agassizii
ENSNBRG00000018065	-	99	85.681	ENSGGOG00000007228	RBMS3	99	85.681	Gorilla_gorilla
ENSNBRG00000018065	-	63	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSNBRG00000018065	-	98	96.806	ENSHBUG00000019785	-	96	95.592	Haplochromis_burtoni
ENSNBRG00000018065	-	99	87.857	ENSHGLG00000002170	RBMS3	99	87.857	Heterocephalus_glaber_female
ENSNBRG00000018065	-	99	87.857	ENSHGLG00100014278	RBMS3	99	87.857	Heterocephalus_glaber_male
ENSNBRG00000018065	-	100	96.643	ENSHCOG00000007894	-	100	96.643	Hippocampus_comes
ENSNBRG00000018065	-	99	90.580	ENSIPUG00000017680	rbms3	99	90.580	Ictalurus_punctatus
ENSNBRG00000018065	-	99	88.333	ENSSTOG00000006324	RBMS3	99	88.333	Ictidomys_tridecemlineatus
ENSNBRG00000018065	-	99	84.286	ENSJJAG00000014708	Rbms3	99	84.524	Jaculus_jaculus
ENSNBRG00000018065	-	99	81.265	ENSKMAG00000020500	rbms3	99	81.265	Kryptolebias_marmoratus
ENSNBRG00000018065	-	100	98.077	ENSKMAG00000012586	-	100	98.077	Kryptolebias_marmoratus
ENSNBRG00000018065	-	60	74.242	ENSLBEG00000006677	rbms3	97	74.242	Labrus_bergylta
ENSNBRG00000018065	-	100	97.115	ENSLBEG00000027388	-	100	97.115	Labrus_bergylta
ENSNBRG00000018065	-	99	89.952	ENSLACG00000010581	RBMS3	99	89.952	Latimeria_chalumnae
ENSNBRG00000018065	-	69	91.003	ENSLOCG00000002328	rbms3	99	91.003	Lepisosteus_oculatus
ENSNBRG00000018065	-	99	84.862	ENSLAFG00000000354	RBMS3	99	84.862	Loxodonta_africana
ENSNBRG00000018065	-	99	88.095	ENSMFAG00000033300	RBMS3	99	88.095	Macaca_fascicularis
ENSNBRG00000018065	-	99	88.095	ENSMMUG00000004404	RBMS3	99	88.095	Macaca_mulatta
ENSNBRG00000018065	-	99	85.450	ENSMNEG00000035839	RBMS3	99	85.450	Macaca_nemestrina
ENSNBRG00000018065	-	100	85.321	ENSMLEG00000029464	RBMS3	100	85.321	Mandrillus_leucophaeus
ENSNBRG00000018065	-	99	83.059	ENSMAMG00000024043	rbms3	99	84.000	Mastacembelus_armatus
ENSNBRG00000018065	-	94	97.959	ENSMAMG00000002176	-	88	97.959	Mastacembelus_armatus
ENSNBRG00000018065	-	100	96.948	ENSMZEG00005026469	-	96	96.948	Maylandia_zebra
ENSNBRG00000018065	-	99	82.033	ENSMZEG00005006308	rbms3	99	82.270	Maylandia_zebra
ENSNBRG00000018065	-	99	86.506	ENSMAUG00000016436	Rbms3	99	86.506	Mesocricetus_auratus
ENSNBRG00000018065	-	99	85.681	ENSMICG00000049249	RBMS3	99	85.681	Microcebus_murinus
ENSNBRG00000018065	-	99	86.265	ENSMOCG00000006997	Rbms3	99	86.265	Microtus_ochrogaster
ENSNBRG00000018065	-	82	84.000	ENSMMOG00000008471	RBMS3	89	87.234	Mola_mola
ENSNBRG00000018065	-	100	96.635	ENSMMOG00000015071	-	100	96.635	Mola_mola
ENSNBRG00000018065	-	99	79.911	ENSMODG00000015125	RBMS3	99	79.241	Monodelphis_domestica
ENSNBRG00000018065	-	100	97.837	ENSMALG00000009155	-	100	97.837	Monopterus_albus
ENSNBRG00000018065	-	99	82.588	ENSMALG00000019536	RBMS3	99	80.660	Monopterus_albus
ENSNBRG00000018065	-	99	85.542	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSNBRG00000018065	-	99	86.265	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSNBRG00000018065	-	99	86.058	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSNBRG00000018065	-	99	86.265	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSNBRG00000018065	-	99	85.092	ENSMPUG00000011956	RBMS3	99	85.092	Mustela_putorius_furo
ENSNBRG00000018065	-	99	88.095	ENSMLUG00000000659	RBMS3	99	88.095	Myotis_lucifugus
ENSNBRG00000018065	-	99	88.193	ENSNGAG00000014039	Rbms3	99	88.193	Nannospalax_galili
ENSNBRG00000018065	-	99	85.681	ENSNLEG00000004129	RBMS3	99	85.681	Nomascus_leucogenys
ENSNBRG00000018065	-	99	77.803	ENSMEUG00000004772	RBMS3	99	77.803	Notamacropus_eugenii
ENSNBRG00000018065	-	99	84.988	ENSOPRG00000006808	RBMS3	85	84.988	Ochotona_princeps
ENSNBRG00000018065	-	99	88.333	ENSODEG00000003651	RBMS3	99	88.333	Octodon_degus
ENSNBRG00000018065	-	99	77.143	ENSONIG00000007172	rbms3	99	77.381	Oreochromis_niloticus
ENSNBRG00000018065	-	99	85.321	ENSOANG00000010529	RBMS3	99	85.321	Ornithorhynchus_anatinus
ENSNBRG00000018065	-	99	84.404	ENSOCUG00000004840	RBMS3	99	84.404	Oryctolagus_cuniculus
ENSNBRG00000018065	-	100	97.115	ENSORLG00000002306	-	100	97.115	Oryzias_latipes
ENSNBRG00000018065	-	99	81.235	ENSORLG00000005370	RBMS3	99	81.235	Oryzias_latipes
ENSNBRG00000018065	-	100	97.356	ENSORLG00020008496	-	100	97.356	Oryzias_latipes_hni
ENSNBRG00000018065	-	99	80.998	ENSORLG00020022674	RBMS3	99	80.998	Oryzias_latipes_hni
ENSNBRG00000018065	-	100	97.356	ENSORLG00015015719	-	100	97.356	Oryzias_latipes_hsok
ENSNBRG00000018065	-	99	81.473	ENSORLG00015005509	rbms3	99	81.473	Oryzias_latipes_hsok
ENSNBRG00000018065	-	99	81.948	ENSOMEG00000014805	RBMS3	99	81.948	Oryzias_melastigma
ENSNBRG00000018065	-	99	90.220	ENSOMEG00000007677	-	100	96.859	Oryzias_melastigma
ENSNBRG00000018065	-	99	84.633	ENSOARG00000014684	RBMS3	99	84.633	Ovis_aries
ENSNBRG00000018065	-	99	85.681	ENSPPAG00000036519	RBMS3	99	85.681	Pan_paniscus
ENSNBRG00000018065	-	99	84.988	ENSPPRG00000002761	RBMS3	99	84.988	Panthera_pardus
ENSNBRG00000018065	-	99	87.619	ENSPTIG00000011568	RBMS3	99	87.619	Panthera_tigris_altaica
ENSNBRG00000018065	-	99	88.333	ENSPTRG00000014709	RBMS3	99	88.333	Pan_troglodytes
ENSNBRG00000018065	-	100	85.321	ENSPANG00000010234	RBMS3	100	85.321	Papio_anubis
ENSNBRG00000018065	-	50	93.269	ENSPKIG00000016025	-	86	80.632	Paramormyrops_kingsleyae
ENSNBRG00000018065	-	62	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSNBRG00000018065	-	99	87.351	ENSPSIG00000005269	RBMS3	99	87.351	Pelodiscus_sinensis
ENSNBRG00000018065	-	82	83.333	ENSPMGG00000021544	rbms3	86	85.542	Periophthalmus_magnuspinnatus
ENSNBRG00000018065	-	92	97.644	ENSPMGG00000021683	-	100	97.644	Periophthalmus_magnuspinnatus
ENSNBRG00000018065	-	99	83.575	ENSPEMG00000001117	Rbms3	99	83.575	Peromyscus_maniculatus_bairdii
ENSNBRG00000018065	-	83	89.459	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSNBRG00000018065	-	99	83.373	ENSPFOG00000017887	rbms3	99	83.373	Poecilia_formosa
ENSNBRG00000018065	-	77	81.308	ENSPLAG00000016866	-	82	81.308	Poecilia_latipinna
ENSNBRG00000018065	-	100	98.321	ENSPMEG00000002993	-	100	98.321	Poecilia_mexicana
ENSNBRG00000018065	-	90	98.404	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSNBRG00000018065	-	100	81.517	ENSPREG00000011880	rbms3	100	81.517	Poecilia_reticulata
ENSNBRG00000018065	-	99	72.018	ENSPPYG00000014050	RBMS3	82	72.018	Pongo_abelii
ENSNBRG00000018065	-	99	65.826	ENSPCAG00000006307	RBMS3	99	65.826	Procavia_capensis
ENSNBRG00000018065	-	99	85.912	ENSPCOG00000017136	RBMS3	99	85.912	Propithecus_coquereli
ENSNBRG00000018065	-	89	88.000	ENSPVAG00000014037	RBMS3	99	75.917	Pteropus_vampyrus
ENSNBRG00000018065	-	99	81.797	ENSPNYG00000010546	rbms3	99	82.033	Pundamilia_nyererei
ENSNBRG00000018065	-	100	99.759	ENSPNYG00000012624	-	100	99.759	Pundamilia_nyererei
ENSNBRG00000018065	-	99	90.580	ENSPNAG00000001800	rbms3	99	90.580	Pygocentrus_nattereri
ENSNBRG00000018065	-	99	86.506	ENSRNOG00000025881	Rbms3	99	86.506	Rattus_norvegicus
ENSNBRG00000018065	-	99	85.219	ENSRBIG00000035863	RBMS3	99	85.219	Rhinopithecus_bieti
ENSNBRG00000018065	-	88	86.807	ENSRROG00000027512	RBMS3	94	85.751	Rhinopithecus_roxellana
ENSNBRG00000018065	-	99	85.681	ENSSBOG00000020232	RBMS3	99	85.681	Saimiri_boliviensis_boliviensis
ENSNBRG00000018065	-	88	82.787	ENSSHAG00000002411	RBMS3	95	81.501	Sarcophilus_harrisii
ENSNBRG00000018065	-	100	94.471	ENSSFOG00015008578	rbms3	100	94.471	Scleropages_formosus
ENSNBRG00000018065	-	99	79.343	ENSSMAG00000004997	rbms3	99	83.333	Scophthalmus_maximus
ENSNBRG00000018065	-	97	93.035	ENSSMAG00000020065	-	97	93.035	Scophthalmus_maximus
ENSNBRG00000018065	-	99	82.824	ENSSDUG00000013656	RBMS3	99	83.059	Seriola_dumerili
ENSNBRG00000018065	-	100	98.798	ENSSDUG00000019287	-	100	98.798	Seriola_dumerili
ENSNBRG00000018065	-	99	82.477	ENSSLDG00000020276	RBMS3	99	82.710	Seriola_lalandi_dorsalis
ENSNBRG00000018065	-	100	98.798	ENSSLDG00000013224	-	100	98.798	Seriola_lalandi_dorsalis
ENSNBRG00000018065	-	78	74.854	ENSSARG00000000695	RBMS3	94	73.926	Sorex_araneus
ENSNBRG00000018065	-	69	85.959	ENSSPUG00000017197	RBMS3	97	84.848	Sphenodon_punctatus
ENSNBRG00000018065	-	99	82.160	ENSSPAG00000020693	rbms3	99	82.394	Stegastes_partitus
ENSNBRG00000018065	-	100	90.783	ENSSPAG00000003983	-	100	90.783	Stegastes_partitus
ENSNBRG00000018065	-	99	87.857	ENSSSCG00000036381	RBMS3	99	87.857	Sus_scrofa
ENSNBRG00000018065	-	76	84.384	ENSTGUG00000003572	RBMS3	99	84.384	Taeniopygia_guttata
ENSNBRG00000018065	-	99	80.706	ENSTRUG00000021719	RBMS3	99	80.706	Takifugu_rubripes
ENSNBRG00000018065	-	100	85.511	ENSTRUG00000007482	-	100	85.680	Takifugu_rubripes
ENSNBRG00000018065	-	78	88.012	ENSTBEG00000005362	RBMS3	94	86.819	Tupaia_belangeri
ENSNBRG00000018065	-	99	84.404	ENSTTRG00000006202	RBMS3	99	84.404	Tursiops_truncatus
ENSNBRG00000018065	-	99	85.092	ENSUMAG00000000263	RBMS3	99	85.092	Ursus_maritimus
ENSNBRG00000018065	-	87	76.378	ENSVPAG00000003842	RBMS3	94	75.321	Vicugna_pacos
ENSNBRG00000018065	-	88	86.649	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSNBRG00000018065	-	70	81.433	ENSXETG00000032055	RBMS3	98	81.433	Xenopus_tropicalis
ENSNBRG00000018065	-	92	82.519	ENSXCOG00000019600	-	100	82.519	Xiphophorus_couchianus
ENSNBRG00000018065	-	99	81.043	ENSXMAG00000021783	rbms3	99	81.043	Xiphophorus_maculatus
ENSNBRG00000018065	-	100	98.561	ENSXMAG00000014382	-	100	98.561	Xiphophorus_maculatus