EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000018141 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4481 bases
Position: chrJH422342.1:2685923-2690403
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023703	zf-C2H2	PF00096.26	7e-21	1	5
ENSNBRP00000023703	zf-C2H2	PF00096.26	7e-21	2	5
ENSNBRP00000023703	zf-C2H2	PF00096.26	7e-21	3	5
ENSNBRP00000023703	zf-C2H2	PF00096.26	7e-21	4	5
ENSNBRP00000023703	zf-C2H2	PF00096.26	7e-21	5	5
ENSNBRP00000023703	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000024318	-	978	-	ENSNBRP00000023703	325 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000018141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000018141	-	54	39.860	ENSNBRG00000023960	-	83	39.860
ENSNBRG00000018141	-	73	43.000	ENSNBRG00000003124	-	99	43.103
ENSNBRG00000018141	-	51	39.423	ENSNBRG00000008827	znf319b	65	39.423
ENSNBRG00000018141	-	51	37.931	ENSNBRG00000004723	-	86	37.931
ENSNBRG00000018141	-	65	42.593	ENSNBRG00000003000	-	82	42.593
ENSNBRG00000018141	-	95	31.707	ENSNBRG00000021247	-	93	31.707
ENSNBRG00000018141	-	54	31.858	ENSNBRG00000005175	zbtb41	77	31.858
ENSNBRG00000018141	-	95	45.000	ENSNBRG00000021375	-	90	45.000
ENSNBRG00000018141	-	59	40.000	ENSNBRG00000024046	-	60	40.000
ENSNBRG00000018141	-	86	40.714	ENSNBRG00000004822	-	93	41.573
ENSNBRG00000018141	-	70	43.363	ENSNBRG00000015873	-	96	45.872
ENSNBRG00000018141	-	84	36.649	ENSNBRG00000007384	-	87	40.288
ENSNBRG00000018141	-	73	38.095	ENSNBRG00000000292	znf710b	58	38.095
ENSNBRG00000018141	-	51	36.036	ENSNBRG00000005849	-	91	36.036
ENSNBRG00000018141	-	82	40.714	ENSNBRG00000000523	-	89	40.714
ENSNBRG00000018141	-	53	32.653	ENSNBRG00000018449	PRDM15	52	32.653
ENSNBRG00000018141	-	70	35.465	ENSNBRG00000015652	-	100	35.465
ENSNBRG00000018141	-	71	42.143	ENSNBRG00000016282	-	100	43.796
ENSNBRG00000018141	-	53	40.351	ENSNBRG00000004557	-	88	40.351
ENSNBRG00000018141	-	84	35.106	ENSNBRG00000002673	gfi1aa	56	35.106
ENSNBRG00000018141	-	50	43.269	ENSNBRG00000024344	-	71	43.269
ENSNBRG00000018141	-	70	40.698	ENSNBRG00000006112	-	63	40.698
ENSNBRG00000018141	-	52	43.478	ENSNBRG00000024019	-	90	43.478
ENSNBRG00000018141	-	62	42.593	ENSNBRG00000010405	-	83	42.593
ENSNBRG00000018141	-	59	46.226	ENSNBRG00000019770	-	88	42.991
ENSNBRG00000018141	-	68	38.732	ENSNBRG00000019481	-	96	38.971
ENSNBRG00000018141	-	58	41.593	ENSNBRG00000024179	-	63	41.593
ENSNBRG00000018141	-	63	36.552	ENSNBRG00000024066	-	96	36.552
ENSNBRG00000018141	-	68	32.215	ENSNBRG00000014882	-	70	32.215
ENSNBRG00000018141	-	57	40.426	ENSNBRG00000016603	-	87	40.426
ENSNBRG00000018141	-	53	37.500	ENSNBRG00000005796	-	98	37.500
ENSNBRG00000018141	-	70	40.000	ENSNBRG00000016234	-	94	40.000
ENSNBRG00000018141	-	73	41.758	ENSNBRG00000001761	-	71	41.758
ENSNBRG00000018141	-	51	39.091	ENSNBRG00000016577	si:dkey-182i3.9	93	39.091
ENSNBRG00000018141	-	64	41.441	ENSNBRG00000009075	znf236	64	42.308
ENSNBRG00000018141	-	58	47.674	ENSNBRG00000024354	-	94	47.674
ENSNBRG00000018141	-	70	33.117	ENSNBRG00000009279	-	90	33.117
ENSNBRG00000018141	-	50	37.037	ENSNBRG00000000321	-	95	37.037
ENSNBRG00000018141	-	68	34.722	ENSNBRG00000010987	-	91	35.099
ENSNBRG00000018141	-	63	38.406	ENSNBRG00000003250	-	94	38.406
ENSNBRG00000018141	-	81	40.000	ENSNBRG00000006445	-	69	40.000
ENSNBRG00000018141	-	52	37.037	ENSNBRG00000008123	-	81	36.496
ENSNBRG00000018141	-	53	39.130	ENSNBRG00000016666	-	97	39.130
ENSNBRG00000018141	-	75	41.176	ENSNBRG00000001163	-	98	43.056
ENSNBRG00000018141	-	51	49.351	ENSNBRG00000006411	-	74	49.351
ENSNBRG00000018141	-	70	47.899	ENSNBRG00000014088	-	99	47.899
ENSNBRG00000018141	-	50	39.130	ENSNBRG00000021998	-	60	39.130
ENSNBRG00000018141	-	52	38.235	ENSNBRG00000004381	-	81	38.235
ENSNBRG00000018141	-	84	41.429	ENSNBRG00000002902	-	97	48.113
ENSNBRG00000018141	-	53	34.400	ENSNBRG00000005805	-	94	34.400
ENSNBRG00000018141	-	70	30.973	ENSNBRG00000006757	-	72	41.111
ENSNBRG00000018141	-	57	39.583	ENSNBRG00000024086	-	60	39.583
ENSNBRG00000018141	-	57	37.195	ENSNBRG00000024293	-	84	37.725
ENSNBRG00000018141	-	94	39.080	ENSNBRG00000013838	-	98	39.080
ENSNBRG00000018141	-	97	38.000	ENSNBRG00000009128	-	99	38.000
ENSNBRG00000018141	-	70	41.176	ENSNBRG00000000960	-	99	45.161
ENSNBRG00000018141	-	67	38.983	ENSNBRG00000013604	-	94	38.983
ENSNBRG00000018141	-	52	41.606	ENSNBRG00000021237	-	89	41.606
ENSNBRG00000018141	-	73	39.286	ENSNBRG00000021967	-	76	39.286
ENSNBRG00000018141	-	67	38.462	ENSNBRG00000024051	-	58	38.462
ENSNBRG00000018141	-	62	38.462	ENSNBRG00000010194	-	66	38.583
ENSNBRG00000018141	-	66	38.542	ENSNBRG00000016550	-	91	39.716
ENSNBRG00000018141	-	96	38.636	ENSNBRG00000004792	-	98	38.636
ENSNBRG00000018141	-	70	44.340	ENSNBRG00000024345	-	98	44.340
ENSNBRG00000018141	-	55	35.714	ENSNBRG00000008223	-	68	46.575
ENSNBRG00000018141	-	84	31.522	ENSNBRG00000013983	scrt1b	91	31.522
ENSNBRG00000018141	-	53	45.455	ENSNBRG00000015442	ZNF319	65	45.455
ENSNBRG00000018141	-	83	42.282	ENSNBRG00000016169	-	95	42.282
ENSNBRG00000018141	-	72	38.462	ENSNBRG00000005823	-	78	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000018141	-	99	95.370	ENSACLG00000026187	-	98	95.370	Astatotilapia_calliptera
ENSNBRG00000018141	-	75	38.947	ENSFHEG00000000789	-	69	38.947	Fundulus_heteroclitus
ENSNBRG00000018141	-	99	95.370	ENSHBUG00000004077	-	98	95.370	Haplochromis_burtoni
ENSNBRG00000018141	-	94	42.336	ENSMAMG00000023490	-	97	42.336	Mastacembelus_armatus
ENSNBRG00000018141	-	96	40.741	ENSMAMG00000023492	-	97	40.741	Mastacembelus_armatus
ENSNBRG00000018141	-	99	95.062	ENSMZEG00005006457	-	98	95.062	Maylandia_zebra
ENSNBRG00000018141	-	99	75.000	ENSPFOG00000012832	-	97	75.000	Poecilia_formosa
ENSNBRG00000018141	-	99	74.695	ENSPLAG00000012410	-	97	75.000	Poecilia_latipinna
ENSNBRG00000018141	-	99	74.695	ENSPMEG00000015550	-	97	75.305	Poecilia_mexicana
ENSNBRG00000018141	-	99	75.610	ENSPREG00000020857	-	97	75.915	Poecilia_reticulata
ENSNBRG00000018141	-	95	37.209	ENSSDUG00000008329	-	97	37.209	Seriola_dumerili
ENSNBRG00000018141	-	99	75.610	ENSXMAG00000025209	-	97	75.915	Xiphophorus_maculatus