EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000018148 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: splicing factor 45-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 17860 bases
Position: chrJH422435.1:913228-931087
Accession: 102776544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000023735	RRM_1	PF00076.22	3.2e-05	1	1
ENSNBRP00000023735	G-patch	PF01585.23	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000024350	-	1140	XM_006806479	ENSNBRP00000023735	379 (aa)	XP_006806542	-

Gene Model

Click here to download ENSNBRG00000018148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000018148	rbm17	100	77.531	ENSG00000134453	RBM17	100	77.531	Homo_sapiens
ENSNBRG00000018148	rbm17	99	89.250	ENSAPOG00000007101	rbm17	99	89.750	Acanthochromis_polyacanthus
ENSNBRG00000018148	rbm17	100	77.778	ENSAMEG00000002107	RBM17	100	77.778	Ailuropoda_melanoleuca
ENSNBRG00000018148	rbm17	100	91.358	ENSACIG00000006251	rbm17	100	91.358	Amphilophus_citrinellus
ENSNBRG00000018148	rbm17	100	90.750	ENSAOCG00000014892	rbm17	100	90.750	Amphiprion_ocellaris
ENSNBRG00000018148	rbm17	100	90.750	ENSAPEG00000022779	rbm17	100	90.750	Amphiprion_percula
ENSNBRG00000018148	rbm17	100	87.531	ENSATEG00000004406	rbm17	100	87.531	Anabas_testudineus
ENSNBRG00000018148	rbm17	100	78.519	ENSAPLG00000004190	RBM17	100	78.519	Anas_platyrhynchos
ENSNBRG00000018148	rbm17	90	75.741	ENSACAG00000005418	RBM17	99	74.124	Anolis_carolinensis
ENSNBRG00000018148	rbm17	100	79.052	ENSANAG00000030127	RBM17	98	88.430	Aotus_nancymaae
ENSNBRG00000018148	rbm17	100	72.250	ENSANAG00000019330	-	95	87.069	Aotus_nancymaae
ENSNBRG00000018148	rbm17	100	94.710	ENSACLG00000003928	rbm17	100	94.710	Astatotilapia_calliptera
ENSNBRG00000018148	rbm17	100	79.648	ENSAMXG00000005853	rbm17	100	79.648	Astyanax_mexicanus
ENSNBRG00000018148	rbm17	100	77.778	ENSBTAG00000021951	RBM17	100	77.778	Bos_taurus
ENSNBRG00000018148	rbm17	100	76.543	ENSBTAG00000011094	-	100	76.543	Bos_taurus
ENSNBRG00000018148	rbm17	86	33.908	WBGene00010233	F58B3.7	97	32.367	Caenorhabditis_elegans
ENSNBRG00000018148	rbm17	100	80.203	ENSCJAG00000020573	RBM17	100	80.203	Callithrix_jacchus
ENSNBRG00000018148	rbm17	100	77.778	ENSCAFG00000005206	RBM17	100	77.778	Canis_familiaris
ENSNBRG00000018148	rbm17	100	80.357	ENSCAFG00020005420	RBM17	100	80.357	Canis_lupus_dingo
ENSNBRG00000018148	rbm17	100	76.904	ENSCHIG00000019921	-	100	75.556	Capra_hircus
ENSNBRG00000018148	rbm17	100	81.395	ENSCHIG00000023204	-	100	81.395	Capra_hircus
ENSNBRG00000018148	rbm17	100	77.206	ENSTSYG00000001165	RBM17	99	89.831	Carlito_syrichta
ENSNBRG00000018148	rbm17	94	67.778	ENSCAPG00000006275	RBM17	99	68.678	Cavia_aperea
ENSNBRG00000018148	rbm17	100	80.513	ENSCPOG00000005679	RBM17	99	80.513	Cavia_porcellus
ENSNBRG00000018148	rbm17	100	78.025	ENSCCAG00000018655	RBM17	98	88.430	Cebus_capucinus
ENSNBRG00000018148	rbm17	100	81.137	ENSCATG00000041566	RBM17	95	90.678	Cercocebus_atys
ENSNBRG00000018148	rbm17	100	76.961	ENSCLAG00000012195	RBM17	99	76.961	Chinchilla_lanigera
ENSNBRG00000018148	rbm17	100	77.531	ENSCSAG00000013564	RBM17	100	77.531	Chlorocebus_sabaeus
ENSNBRG00000018148	rbm17	92	60.963	ENSCHOG00000005131	RBM17	100	60.963	Choloepus_hoffmanni
ENSNBRG00000018148	rbm17	100	78.025	ENSCPBG00000019836	RBM17	100	78.025	Chrysemys_picta_bellii
ENSNBRG00000018148	rbm17	100	44.153	ENSCSAVG00000008782	-	100	43.675	Ciona_savignyi
ENSNBRG00000018148	rbm17	97	72.340	ENSCANG00000023715	-	99	72.487	Colobus_angolensis_palliatus
ENSNBRG00000018148	rbm17	100	77.723	ENSCANG00000030987	RBM17	95	90.678	Colobus_angolensis_palliatus
ENSNBRG00000018148	rbm17	100	66.324	ENSCGRG00001009256	-	100	63.476	Cricetulus_griseus_chok1gshd
ENSNBRG00000018148	rbm17	100	77.206	ENSCGRG00001013842	Rbm17	100	77.206	Cricetulus_griseus_chok1gshd
ENSNBRG00000018148	rbm17	100	77.206	ENSCGRG00000006907	Rbm17	100	77.206	Cricetulus_griseus_crigri
ENSNBRG00000018148	rbm17	100	85.185	ENSCSEG00000018164	rbm17	100	85.185	Cynoglossus_semilaevis
ENSNBRG00000018148	rbm17	100	86.768	ENSCVAG00000002476	rbm17	100	86.768	Cyprinodon_variegatus
ENSNBRG00000018148	rbm17	100	76.010	ENSDARG00000031346	rbm17	100	74.286	Danio_rerio
ENSNBRG00000018148	rbm17	100	77.531	ENSDNOG00000035920	RBM17	100	77.531	Dasypus_novemcinctus
ENSNBRG00000018148	rbm17	99	39.286	FBgn0086683	Spf45	99	37.963	Drosophila_melanogaster
ENSNBRG00000018148	rbm17	100	66.169	ENSETEG00000006642	RBM17	86	86.256	Echinops_telfairi
ENSNBRG00000018148	rbm17	68	64.000	ENSEBUG00000010253	rbm17	86	64.000	Eptatretus_burgeri
ENSNBRG00000018148	rbm17	100	80.563	ENSEASG00005019205	-	100	80.307	Equus_asinus_asinus
ENSNBRG00000018148	rbm17	92	76.330	ENSEASG00005009236	-	100	74.866	Equus_asinus_asinus
ENSNBRG00000018148	rbm17	100	69.533	ENSECAG00000001379	-	100	68.148	Equus_caballus
ENSNBRG00000018148	rbm17	100	73.127	ENSECAG00000008939	RBM17	100	73.127	Equus_caballus
ENSNBRG00000018148	rbm17	85	59.483	ENSEEUG00000013077	RBM17	100	59.483	Erinaceus_europaeus
ENSNBRG00000018148	rbm17	100	77.855	ENSELUG00000006440	rbm17	100	77.855	Esox_lucius
ENSNBRG00000018148	rbm17	100	77.778	ENSFCAG00000031988	RBM17	100	77.778	Felis_catus
ENSNBRG00000018148	rbm17	100	77.531	ENSFALG00000001790	RBM17	100	77.531	Ficedula_albicollis
ENSNBRG00000018148	rbm17	100	76.961	ENSFDAG00000007470	RBM17	100	76.961	Fukomys_damarensis
ENSNBRG00000018148	rbm17	100	90.956	ENSFHEG00000001266	rbm17	100	90.956	Fundulus_heteroclitus
ENSNBRG00000018148	rbm17	99	76.627	ENSGMOG00000008438	rbm17	100	76.627	Gadus_morhua
ENSNBRG00000018148	rbm17	100	78.272	ENSGALG00000006332	RBM17	100	78.272	Gallus_gallus
ENSNBRG00000018148	rbm17	100	88.071	ENSGAFG00000019879	rbm17	100	88.071	Gambusia_affinis
ENSNBRG00000018148	rbm17	99	86.567	ENSGACG00000019174	rbm17	99	86.567	Gasterosteus_aculeatus
ENSNBRG00000018148	rbm17	100	78.025	ENSGAGG00000019906	RBM17	100	78.025	Gopherus_agassizii
ENSNBRG00000018148	rbm17	100	94.710	ENSHBUG00000016624	rbm17	100	94.710	Haplochromis_burtoni
ENSNBRG00000018148	rbm17	100	76.961	ENSHGLG00000011580	RBM17	100	76.961	Heterocephalus_glaber_female
ENSNBRG00000018148	rbm17	100	76.961	ENSHGLG00100010460	RBM17	100	76.961	Heterocephalus_glaber_male
ENSNBRG00000018148	rbm17	100	66.329	ENSHGLG00100010556	-	100	63.291	Heterocephalus_glaber_male
ENSNBRG00000018148	rbm17	99	81.971	ENSHCOG00000010865	rbm17	100	81.971	Hippocampus_comes
ENSNBRG00000018148	rbm17	100	79.699	ENSIPUG00000007699	Rbm17	100	79.699	Ictalurus_punctatus
ENSNBRG00000018148	rbm17	100	77.206	ENSSTOG00000013591	RBM17	100	77.206	Ictidomys_tridecemlineatus
ENSNBRG00000018148	rbm17	100	77.206	ENSJJAG00000022886	Rbm17	100	77.206	Jaculus_jaculus
ENSNBRG00000018148	rbm17	100	57.494	ENSJJAG00000000993	-	100	54.568	Jaculus_jaculus
ENSNBRG00000018148	rbm17	100	88.413	ENSKMAG00000021400	rbm17	100	88.413	Kryptolebias_marmoratus
ENSNBRG00000018148	rbm17	100	87.376	ENSLBEG00000000881	rbm17	100	83.848	Labrus_bergylta
ENSNBRG00000018148	rbm17	99	61.827	ENSLACG00000017297	RBM17	99	61.882	Latimeria_chalumnae
ENSNBRG00000018148	rbm17	100	79.902	ENSLOCG00000015659	rbm17	100	78.571	Lepisosteus_oculatus
ENSNBRG00000018148	rbm17	100	76.585	ENSLAFG00000011629	RBM17	100	76.585	Loxodonta_africana
ENSNBRG00000018148	rbm17	100	81.137	ENSMFAG00000035521	RBM17	95	90.678	Macaca_fascicularis
ENSNBRG00000018148	rbm17	100	77.531	ENSMMUG00000015152	RBM17	95	90.678	Macaca_mulatta
ENSNBRG00000018148	rbm17	100	81.137	ENSMNEG00000017264	RBM17	95	90.678	Macaca_nemestrina
ENSNBRG00000018148	rbm17	100	81.137	ENSMLEG00000029340	RBM17	95	90.678	Mandrillus_leucophaeus
ENSNBRG00000018148	rbm17	100	84.103	ENSMAMG00000000387	rbm17	100	84.086	Mastacembelus_armatus
ENSNBRG00000018148	rbm17	100	94.710	ENSMZEG00005015179	rbm17	100	94.710	Maylandia_zebra
ENSNBRG00000018148	rbm17	100	77.129	ENSMGAG00000003981	RBM17	100	77.129	Meleagris_gallopavo
ENSNBRG00000018148	rbm17	100	77.206	ENSMAUG00000019247	Rbm17	100	77.206	Mesocricetus_auratus
ENSNBRG00000018148	rbm17	100	71.602	ENSMICG00000041489	-	100	71.602	Microcebus_murinus
ENSNBRG00000018148	rbm17	100	78.055	ENSMICG00000003976	-	100	78.055	Microcebus_murinus
ENSNBRG00000018148	rbm17	100	77.206	ENSMOCG00000011847	Rbm17	100	77.206	Microtus_ochrogaster
ENSNBRG00000018148	rbm17	92	65.312	ENSMOCG00000014517	-	99	65.489	Microtus_ochrogaster
ENSNBRG00000018148	rbm17	100	82.152	ENSMMOG00000010264	rbm17	100	80.196	Mola_mola
ENSNBRG00000018148	rbm17	100	77.778	ENSMODG00000016648	RBM17	100	77.778	Monodelphis_domestica
ENSNBRG00000018148	rbm17	100	88.918	ENSMALG00000010597	rbm17	100	88.660	Monopterus_albus
ENSNBRG00000018148	rbm17	100	77.206	MGP_CAROLIEiJ_G0023173	Rbm17	100	77.206	Mus_caroli
ENSNBRG00000018148	rbm17	100	77.206	ENSMUSG00000037197	Rbm17	100	77.206	Mus_musculus
ENSNBRG00000018148	rbm17	100	77.451	MGP_PahariEiJ_G0019233	Rbm17	100	77.451	Mus_pahari
ENSNBRG00000018148	rbm17	100	77.206	MGP_SPRETEiJ_G0024091	Rbm17	100	77.206	Mus_spretus
ENSNBRG00000018148	rbm17	85	75.000	ENSMPUG00000016359	RBM17	96	75.000	Mustela_putorius_furo
ENSNBRG00000018148	rbm17	100	75.550	ENSMLUG00000002302	-	100	75.550	Myotis_lucifugus
ENSNBRG00000018148	rbm17	100	74.447	ENSMLUG00000025709	-	100	73.515	Myotis_lucifugus
ENSNBRG00000018148	rbm17	100	77.206	ENSNGAG00000000741	Rbm17	100	77.206	Nannospalax_galili
ENSNBRG00000018148	rbm17	100	57.881	ENSNGAG00000000663	-	100	56.959	Nannospalax_galili
ENSNBRG00000018148	rbm17	100	78.500	ENSNLEG00000033350	RBM17	95	90.678	Nomascus_leucogenys
ENSNBRG00000018148	rbm17	100	72.346	ENSMEUG00000011347	RBM17	100	72.346	Notamacropus_eugenii
ENSNBRG00000018148	rbm17	100	68.473	ENSOPRG00000002993	RBM17	100	65.217	Ochotona_princeps
ENSNBRG00000018148	rbm17	100	76.773	ENSODEG00000004393	RBM17	100	76.773	Octodon_degus
ENSNBRG00000018148	rbm17	97	63.947	ENSODEG00000007286	-	99	62.434	Octodon_degus
ENSNBRG00000018148	rbm17	100	92.118	ENSONIG00000011838	rbm17	100	92.118	Oreochromis_niloticus
ENSNBRG00000018148	rbm17	100	76.108	ENSOANG00000015455	RBM17	100	76.847	Ornithorhynchus_anatinus
ENSNBRG00000018148	rbm17	100	88.889	ENSORLG00000028798	rbm17	100	89.899	Oryzias_latipes
ENSNBRG00000018148	rbm17	100	91.990	ENSORLG00020004593	rbm17	100	90.439	Oryzias_latipes_hni
ENSNBRG00000018148	rbm17	100	88.366	ENSORLG00015000033	rbm17	100	88.366	Oryzias_latipes_hsok
ENSNBRG00000018148	rbm17	100	83.848	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSNBRG00000018148	rbm17	100	77.451	ENSOGAG00000015687	RBM17	100	77.451	Otolemur_garnettii
ENSNBRG00000018148	rbm17	100	77.778	ENSOARG00000012975	RBM17	100	77.778	Ovis_aries
ENSNBRG00000018148	rbm17	100	77.970	ENSPPAG00000032347	RBM17	95	90.678	Pan_paniscus
ENSNBRG00000018148	rbm17	100	77.778	ENSPPRG00000010706	RBM17	100	77.778	Panthera_pardus
ENSNBRG00000018148	rbm17	100	77.778	ENSPTIG00000007596	RBM17	100	77.778	Panthera_tigris_altaica
ENSNBRG00000018148	rbm17	100	77.970	ENSPTRG00000002265	RBM17	95	90.678	Pan_troglodytes
ENSNBRG00000018148	rbm17	100	81.137	ENSPANG00000023425	RBM17	95	90.678	Papio_anubis
ENSNBRG00000018148	rbm17	100	77.451	ENSPKIG00000025526	rbm17	100	75.184	Paramormyrops_kingsleyae
ENSNBRG00000018148	rbm17	100	78.061	ENSPKIG00000005048	-	100	78.571	Paramormyrops_kingsleyae
ENSNBRG00000018148	rbm17	100	76.716	ENSPSIG00000012332	RBM17	100	76.716	Pelodiscus_sinensis
ENSNBRG00000018148	rbm17	100	84.750	ENSPMGG00000007980	rbm17	100	84.750	Periophthalmus_magnuspinnatus
ENSNBRG00000018148	rbm17	100	77.206	ENSPEMG00000014320	Rbm17	100	77.206	Peromyscus_maniculatus_bairdii
ENSNBRG00000018148	rbm17	100	77.641	ENSPCIG00000019260	-	100	77.641	Phascolarctos_cinereus
ENSNBRG00000018148	rbm17	100	82.660	ENSPFOG00000013271	rbm17	100	82.660	Poecilia_formosa
ENSNBRG00000018148	rbm17	100	88.175	ENSPLAG00000004455	rbm17	100	87.500	Poecilia_latipinna
ENSNBRG00000018148	rbm17	100	86.352	ENSPMEG00000014864	rbm17	100	86.352	Poecilia_mexicana
ENSNBRG00000018148	rbm17	100	88.265	ENSPREG00000015589	rbm17	100	88.265	Poecilia_reticulata
ENSNBRG00000018148	rbm17	79	58.675	ENSPPYG00000019042	-	100	59.295	Pongo_abelii
ENSNBRG00000018148	rbm17	100	77.531	ENSPPYG00000002067	RBM17	100	77.531	Pongo_abelii
ENSNBRG00000018148	rbm17	99	61.421	ENSPPYG00000019881	-	100	61.183	Pongo_abelii
ENSNBRG00000018148	rbm17	100	70.123	ENSPCAG00000016879	RBM17	100	70.123	Procavia_capensis
ENSNBRG00000018148	rbm17	100	79.747	ENSPCOG00000027881	RBM17	100	79.747	Propithecus_coquereli
ENSNBRG00000018148	rbm17	100	70.197	ENSPVAG00000015499	RBM17	100	70.398	Pteropus_vampyrus
ENSNBRG00000018148	rbm17	100	88.601	ENSPNYG00000015274	rbm17	100	88.175	Pundamilia_nyererei
ENSNBRG00000018148	rbm17	100	80.856	ENSPNAG00000030046	rbm17	100	80.856	Pygocentrus_nattereri
ENSNBRG00000018148	rbm17	100	77.206	ENSRNOG00000018767	Rbm17	100	77.206	Rattus_norvegicus
ENSNBRG00000018148	rbm17	100	78.500	ENSRBIG00000043727	RBM17	95	90.678	Rhinopithecus_bieti
ENSNBRG00000018148	rbm17	100	81.137	ENSRROG00000044142	RBM17	95	90.678	Rhinopithecus_roxellana
ENSNBRG00000018148	rbm17	100	69.327	ENSSBOG00000023653	-	100	69.327	Saimiri_boliviensis_boliviensis
ENSNBRG00000018148	rbm17	100	79.949	ENSSBOG00000031661	-	93	90.435	Saimiri_boliviensis_boliviensis
ENSNBRG00000018148	rbm17	100	77.778	ENSSHAG00000012480	-	100	77.778	Sarcophilus_harrisii
ENSNBRG00000018148	rbm17	100	76.961	ENSSFOG00015009892	rbm17	100	76.225	Scleropages_formosus
ENSNBRG00000018148	rbm17	100	88.946	ENSSMAG00000012368	rbm17	100	87.147	Scophthalmus_maximus
ENSNBRG00000018148	rbm17	100	91.473	ENSSDUG00000015015	rbm17	100	89.406	Seriola_dumerili
ENSNBRG00000018148	rbm17	100	91.473	ENSSLDG00000014486	rbm17	100	89.406	Seriola_lalandi_dorsalis
ENSNBRG00000018148	rbm17	99	77.970	ENSSPUG00000001036	RBM17	99	77.970	Sphenodon_punctatus
ENSNBRG00000018148	rbm17	100	90.176	ENSSPAG00000002338	rbm17	100	90.176	Stegastes_partitus
ENSNBRG00000018148	rbm17	100	77.531	ENSSSCG00000011134	RBM17	100	77.531	Sus_scrofa
ENSNBRG00000018148	rbm17	100	77.206	ENSTGUG00000002013	RBM17	100	77.206	Taeniopygia_guttata
ENSNBRG00000018148	rbm17	100	86.139	ENSTRUG00000010698	rbm17	100	86.139	Takifugu_rubripes
ENSNBRG00000018148	rbm17	100	84.975	ENSTNIG00000006892	rbm17	100	84.975	Tetraodon_nigroviridis
ENSNBRG00000018148	rbm17	100	61.728	ENSTBEG00000014686	RBM17	100	63.210	Tupaia_belangeri
ENSNBRG00000018148	rbm17	90	77.285	ENSTTRG00000001344	RBM17	99	77.285	Tursiops_truncatus
ENSNBRG00000018148	rbm17	100	79.798	ENSUAMG00000009499	RBM17	100	79.798	Ursus_americanus
ENSNBRG00000018148	rbm17	100	81.654	ENSUMAG00000012237	RBM17	100	81.654	Ursus_maritimus
ENSNBRG00000018148	rbm17	100	68.796	ENSVPAG00000005497	RBM17	86	83.704	Vicugna_pacos
ENSNBRG00000018148	rbm17	100	80.357	ENSVVUG00000006780	RBM17	100	80.357	Vulpes_vulpes
ENSNBRG00000018148	rbm17	99	75.000	ENSXETG00000018123	rbm17	100	73.881	Xenopus_tropicalis
ENSNBRG00000018148	rbm17	100	87.065	ENSXMAG00000008674	rbm17	100	87.065	Xiphophorus_maculatus