EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000018165 (Gene tree)
Gene ID
102784653
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Plus strand
Length
11830 bases
Position
chrJH422328.1:2962111-2973940
Accession
102784653
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000023746MMR_HSR1PF01926.230.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000024361-3606XM_006798240ENSNBRP00000023746220 (aa)XP_006798303UPI0003EC5C38
Gene Model
Click here to download ENSNBRG00000018165's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018165's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000018165rab5c8035.165ENSNBRG00000013940rab9b8235.165
ENSNBRG00000018165rab5c7436.585ENSNBRG00000018106-7736.585
ENSNBRG00000018165rab5c5431.148ENSNBRG00000010663arl8a6431.061
ENSNBRG00000018165rab5c7637.791ENSNBRG00000014428rab127137.791
ENSNBRG00000018165rab5c9139.303ENSNBRG00000013507rab18a8043.636
ENSNBRG00000018165rab5c7437.805ENSNBRG00000005082RAB39B7737.805
ENSNBRG00000018165rab5c5032.143ENSNBRG00000002346RAP2B9433.600
ENSNBRG00000018165rab5c9042.211ENSNBRG00000008137rab18b8046.061
ENSNBRG00000018165rab5c8942.714ENSNBRG00000011607rab25a9342.714
ENSNBRG00000018165rab5c5441.667ENSNBRG00000011872-6041.667
ENSNBRG00000018165rab5c8043.333ENSNBRG00000006202zgc:1719277744.785
ENSNBRG00000018165rab5c9884.722ENSNBRG00000011763rab5aa9984.259
ENSNBRG00000018165rab5c7539.766ENSNBRG00000002684zgc:1015597339.766
ENSNBRG00000018165rab5c7242.405ENSNBRG00000008930si:dkey-16l2.169636.816
ENSNBRG00000018165rab5c7339.130ENSNBRG00000001056rab157639.130
ENSNBRG00000018165rab5c8944.615ENSNBRG00000020492-9644.103
ENSNBRG00000018165rab5c7538.462ENSNBRG00000007077rab33ba8036.538
ENSNBRG00000018165rab5c7334.756ENSNBRG00000023214si:dkey-13a21.47934.756
ENSNBRG00000018165rab5c9344.712ENSNBRG00000017793RAB177649.123
ENSNBRG00000018165rab5c7149.045ENSNBRG00000005116rab11al7349.045
ENSNBRG00000018165rab5c7043.791ENSNBRG00000015905rab6bb7743.791
ENSNBRG00000018165rab5c7533.918ENSNBRG00000024340RAB9A9431.707
ENSNBRG00000018165rab5c7235.152ENSNBRG00000008714RAB297235.152
ENSNBRG00000018165rab5c8640.741ENSNBRG00000005542-8740.741
ENSNBRG00000018165rab5c8943.077ENSNBRG00000003873rab1ba8146.626
ENSNBRG00000018165rab5c8141.011ENSNBRG00000001241rab2a7643.478
ENSNBRG00000018165rab5c8039.205ENSNBRG00000004124rab138142.236
ENSNBRG00000018165rab5c7447.239ENSNBRG00000000372rab11bb7547.239
ENSNBRG00000018165rab5c9339.024ENSNBRG00000013673rab6ba9939.024
ENSNBRG00000018165rab5c7433.728ENSNBRG00000017996-7333.728
ENSNBRG00000018165rab5c7347.826ENSNBRG00000023898rab11ba6247.239
ENSNBRG00000018165rab5c7338.554ENSNBRG00000022235rab33a6938.554
ENSNBRG00000018165rab5c9689.151ENSNBRG00000016922-10087.838
ENSNBRG00000018165rab5c7444.785ENSNBRG00000016716rab6a7844.785
ENSNBRG00000018165rab5c7942.697ENSNBRG00000021829RAB7A9939.320
ENSNBRG00000018165rab5c9631.222ENSNBRG00000007544rab32b9931.674
ENSNBRG00000018165rab5c8941.667ENSNBRG00000023885-7447.826
ENSNBRG00000018165rab5c7038.312ENSNBRG00000002778RAB157338.312
ENSNBRG00000018165rab5c7843.182ENSNBRG00000002772-8543.182
ENSNBRG00000018165rab5c6830.769ENSNBRG00000003915rasl11b7030.460
ENSNBRG00000018165rab5c8842.564ENSNBRG00000012893rab11a9243.077
ENSNBRG00000018165rab5c7435.976ENSNBRG00000021487rab42a6235.976
ENSNBRG00000018165rab5c8640.212ENSNBRG00000002726-7642.683
ENSNBRG00000018165rab5c5532.258ENSNBRG00000023542arl8bb6332.258
ENSNBRG00000018165rab5c7644.311ENSNBRG00000002082rab307644.311
ENSNBRG00000018165rab5c7234.810ENSNBRG00000013691rab237436.842
ENSNBRG00000018165rab5c7543.529ENSNBRG00000002825-8143.787
ENSNBRG00000018165rab5c7334.756ENSNBRG00000000489rabl27134.756
ENSNBRG00000018165rab5c7032.468ENSNBRG00000013795rheb8332.468
ENSNBRG00000018165rab5c7532.530ENSNBRG00000004403kras9031.579
ENSNBRG00000018165rab5c7443.558ENSNBRG00000022702rab418241.954
ENSNBRG00000018165rab5c5431.148ENSNBRG00000018737arl8ba6231.148
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000018165rab5c9891.204ENSG00000108774RAB5C10095.161Homo_sapiens
ENSNBRG00000018165rab5c10096.364ENSAPOG00000016864rab5c10096.364Acanthochromis_polyacanthus
ENSNBRG00000018165rab5c9891.204ENSAMEG00000006003RAB5C9988.889Ailuropoda_melanoleuca
ENSNBRG00000018165rab5c10099.091ENSACIG00000010896rab5c10099.091Amphilophus_citrinellus
ENSNBRG00000018165rab5c10096.364ENSAOCG00000016614rab5c10096.364Amphiprion_ocellaris
ENSNBRG00000018165rab5c9896.279ENSAPEG00000017868-9996.279Amphiprion_percula
ENSNBRG00000018165rab5c9997.696ENSATEG00000001937rab5c9997.696Anabas_testudineus
ENSNBRG00000018165rab5c9393.171ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSNBRG00000018165rab5c10099.091ENSACLG00000002706rab5c10099.091Astatotilapia_calliptera
ENSNBRG00000018165rab5c9689.151ENSACLG00000008615-10087.838Astatotilapia_calliptera
ENSNBRG00000018165rab5c9591.827ENSAMXG00000037267-9991.827Astyanax_mexicanus
ENSNBRG00000018165rab5c10096.833ENSAMXG00000043717rab5c10096.833Astyanax_mexicanus
ENSNBRG00000018165rab5c9891.204ENSBTAG00000006982RAB5C9988.426Bos_taurus
ENSNBRG00000018165rab5c9675.000WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSNBRG00000018165rab5c9891.204ENSCAFG00000015629RAB5C9988.889Canis_familiaris
ENSNBRG00000018165rab5c9891.204ENSCAFG00020013537RAB5C9988.889Canis_lupus_dingo
ENSNBRG00000018165rab5c9891.204ENSCHIG00000012960RAB5C9988.426Capra_hircus
ENSNBRG00000018165rab5c9891.667ENSTSYG00000030531RAB5C9988.889Carlito_syrichta
ENSNBRG00000018165rab5c9891.204ENSCCAG00000025940RAB5C9988.426Cebus_capucinus
ENSNBRG00000018165rab5c9891.204ENSCATG00000040873RAB5C9988.889Cercocebus_atys
ENSNBRG00000018165rab5c9891.204ENSCLAG00000016650RAB5C9988.426Chinchilla_lanigera
ENSNBRG00000018165rab5c8194.382ENSCHOG00000009886RAB5C10094.382Choloepus_hoffmanni
ENSNBRG00000018165rab5c10075.000ENSCING00000003340-10075.000Ciona_intestinalis
ENSNBRG00000018165rab5c9975.556ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSNBRG00000018165rab5c9890.741ENSCGRG00001014226Rab5c9988.426Cricetulus_griseus_chok1gshd
ENSNBRG00000018165rab5c9890.741ENSCGRG00000007534Rab5c9988.426Cricetulus_griseus_crigri
ENSNBRG00000018165rab5c10094.545ENSCSEG00000017024rab5c10094.545Cynoglossus_semilaevis
ENSNBRG00000018165rab5c10095.000ENSCVAG00000009550rab5c10095.000Cyprinodon_variegatus
ENSNBRG00000018165rab5c9890.741ENSDNOG00000038853RAB5C9987.963Dasypus_novemcinctus
ENSNBRG00000018165rab5c9892.130ENSDORG00000006819Rab5c9989.352Dipodomys_ordii
ENSNBRG00000018165rab5c9076.263FBgn0014010Rab58480.000Drosophila_melanogaster
ENSNBRG00000018165rab5c8983.163ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSNBRG00000018165rab5c9891.204ENSEASG00005009281RAB5C9988.889Equus_asinus_asinus
ENSNBRG00000018165rab5c9891.667ENSECAG00000025054RAB5C9988.889Equus_caballus
ENSNBRG00000018165rab5c9891.204ENSEEUG00000002790RAB5C9988.426Erinaceus_europaeus
ENSNBRG00000018165rab5c9894.907ENSELUG00000018516rab5c9994.907Esox_lucius
ENSNBRG00000018165rab5c10091.818ENSELUG00000010439-10091.818Esox_lucius
ENSNBRG00000018165rab5c9891.204ENSFCAG00000002148RAB5C9988.426Felis_catus
ENSNBRG00000018165rab5c9890.278ENSFDAG00000021541RAB5C9987.963Fukomys_damarensis
ENSNBRG00000018165rab5c10096.364ENSFHEG00000012117rab5c10096.364Fundulus_heteroclitus
ENSNBRG00000018165rab5c9989.954ENSFHEG00000015268-9989.954Fundulus_heteroclitus
ENSNBRG00000018165rab5c10095.909ENSGMOG00000015096rab5c10095.909Gadus_morhua
ENSNBRG00000018165rab5c7687.500ENSGMOG00000001876-9787.500Gadus_morhua
ENSNBRG00000018165rab5c10096.364ENSGAFG00000000884rab5c10096.364Gambusia_affinis
ENSNBRG00000018165rab5c9590.431ENSGAFG00000003642-9988.288Gambusia_affinis
ENSNBRG00000018165rab5c10091.818ENSGACG00000008659rab5c10091.818Gasterosteus_aculeatus
ENSNBRG00000018165rab5c9891.204ENSGGOG00000005472RAB5C9988.889Gorilla_gorilla
ENSNBRG00000018165rab5c10099.091ENSHBUG00000002014rab5c10099.091Haplochromis_burtoni
ENSNBRG00000018165rab5c9689.151ENSHBUG00000006823-10087.838Haplochromis_burtoni
ENSNBRG00000018165rab5c9889.815ENSHGLG00000012067RAB5C9987.500Heterocephalus_glaber_female
ENSNBRG00000018165rab5c9580.952ENSHCOG00000020238-9979.452Hippocampus_comes
ENSNBRG00000018165rab5c10096.380ENSHCOG00000004662rab5c9996.380Hippocampus_comes
ENSNBRG00000018165rab5c9594.258ENSIPUG00000020082rab5c10093.694Ictalurus_punctatus
ENSNBRG00000018165rab5c9890.741ENSSTOG00000006620RAB5C9988.426Ictidomys_tridecemlineatus
ENSNBRG00000018165rab5c9891.204ENSJJAG00000021181Rab5c9988.426Jaculus_jaculus
ENSNBRG00000018165rab5c10096.818ENSKMAG00000020038rab5c10096.818Kryptolebias_marmoratus
ENSNBRG00000018165rab5c9989.954ENSKMAG00000017417-9989.954Kryptolebias_marmoratus
ENSNBRG00000018165rab5c10097.273ENSLBEG00000004128rab5c10097.273Labrus_bergylta
ENSNBRG00000018165rab5c10089.593ENSLBEG00000010408-10089.593Labrus_bergylta
ENSNBRG00000018165rab5c9893.056ENSLOCG00000012566rab5c10091.204Lepisosteus_oculatus
ENSNBRG00000018165rab5c9891.204ENSMFAG00000039627RAB5C9988.889Macaca_fascicularis
ENSNBRG00000018165rab5c9891.204ENSMNEG00000000355RAB5C9988.889Macaca_nemestrina
ENSNBRG00000018165rab5c9990.455ENSMAMG00000016207-10090.455Mastacembelus_armatus
ENSNBRG00000018165rab5c10096.818ENSMAMG00000022322rab5c10096.818Mastacembelus_armatus
ENSNBRG00000018165rab5c10099.091ENSMZEG00005022735rab5c10099.091Maylandia_zebra
ENSNBRG00000018165rab5c9689.151ENSMZEG00005021090-10087.838Maylandia_zebra
ENSNBRG00000018165rab5c9891.667ENSMAUG00000015005Rab5c9988.889Mesocricetus_auratus
ENSNBRG00000018165rab5c9891.667ENSMICG00000041608RAB5C9988.889Microcebus_murinus
ENSNBRG00000018165rab5c9891.204ENSMOCG00000018531-9988.426Microtus_ochrogaster
ENSNBRG00000018165rab5c10095.909ENSMMOG00000020621rab5c10095.909Mola_mola
ENSNBRG00000018165rab5c9889.767ENSMALG00000006052rab5c9789.954Monopterus_albus
ENSNBRG00000018165rab5c9987.727ENSMALG00000022348-10087.727Monopterus_albus
ENSNBRG00000018165rab5c9891.667MGP_CAROLIEiJ_G0017184Rab5c9988.889Mus_caroli
ENSNBRG00000018165rab5c9891.667ENSMUSG00000019173Rab5c9988.889Mus_musculus
ENSNBRG00000018165rab5c9891.667MGP_PahariEiJ_G0018314Rab5c9988.889Mus_pahari
ENSNBRG00000018165rab5c9891.667MGP_SPRETEiJ_G0018027Rab5c9988.889Mus_spretus
ENSNBRG00000018165rab5c9891.204ENSMPUG00000010554RAB5C9988.889Mustela_putorius_furo
ENSNBRG00000018165rab5c9891.204ENSNGAG00000010286Rab5c9988.426Nannospalax_galili
ENSNBRG00000018165rab5c8187.640ENSOPRG00000008255RAB5C10087.640Ochotona_princeps
ENSNBRG00000018165rab5c9890.741ENSODEG00000017920RAB5C9987.963Octodon_degus
ENSNBRG00000018165rab5c10099.091ENSONIG00000001113rab5c10099.091Oreochromis_niloticus
ENSNBRG00000018165rab5c9996.313ENSORLG00000003882rab5c9996.313Oryzias_latipes
ENSNBRG00000018165rab5c9995.853ENSORLG00020008388rab5c9995.853Oryzias_latipes_hni
ENSNBRG00000018165rab5c9996.313ENSORLG00015021900rab5c9996.313Oryzias_latipes_hsok
ENSNBRG00000018165rab5c9996.313ENSOMEG00000023078rab5c9996.313Oryzias_melastigma
ENSNBRG00000018165rab5c9891.667ENSOGAG00000009456RAB5C9988.889Otolemur_garnettii
ENSNBRG00000018165rab5c9891.204ENSOARG00000018768RAB5C9988.426Ovis_aries
ENSNBRG00000018165rab5c9891.204ENSPPAG00000037206RAB5C9988.889Pan_paniscus
ENSNBRG00000018165rab5c9891.204ENSPPRG00000005745RAB5C9988.426Panthera_pardus
ENSNBRG00000018165rab5c9891.204ENSPTIG00000008177RAB5C9988.426Panthera_tigris_altaica
ENSNBRG00000018165rab5c9891.204ENSPTRG00000009194RAB5C9988.889Pan_troglodytes
ENSNBRG00000018165rab5c9887.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSNBRG00000018165rab5c9887.963ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSNBRG00000018165rab5c10092.273ENSPMGG00000010792rab5c9993.953Periophthalmus_magnuspinnatus
ENSNBRG00000018165rab5c9891.204ENSPEMG00000017971Rab5c9988.426Peromyscus_maniculatus_bairdii
ENSNBRG00000018165rab5c9976.037ENSPMAG00000001399rab5c9976.389Petromyzon_marinus
ENSNBRG00000018165rab5c8781.250ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSNBRG00000018165rab5c9878.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSNBRG00000018165rab5c9891.204ENSPCIG00000020225-9988.889Phascolarctos_cinereus
ENSNBRG00000018165rab5c9989.498ENSPLAG00000016333-10089.498Poecilia_latipinna
ENSNBRG00000018165rab5c10096.364ENSPLAG00000004790rab5c10096.364Poecilia_latipinna
ENSNBRG00000018165rab5c9690.610ENSPMEG00000012614-10088.789Poecilia_mexicana
ENSNBRG00000018165rab5c10096.364ENSPMEG00000011336rab5c10096.364Poecilia_mexicana
ENSNBRG00000018165rab5c8591.005ENSPREG00000022167-8992.350Poecilia_reticulata
ENSNBRG00000018165rab5c10096.364ENSPREG00000010146rab5c10096.364Poecilia_reticulata
ENSNBRG00000018165rab5c9891.204ENSPPYG00000008398RAB5C9988.889Pongo_abelii
ENSNBRG00000018165rab5c9890.278ENSPCAG00000016412RAB5C9987.500Procavia_capensis
ENSNBRG00000018165rab5c9890.741ENSPCOG00000026327RAB5C9988.426Propithecus_coquereli
ENSNBRG00000018165rab5c9891.667ENSPVAG00000003867RAB5C9988.889Pteropus_vampyrus
ENSNBRG00000018165rab5c10099.091ENSPNYG00000010615rab5c10099.091Pundamilia_nyererei
ENSNBRG00000018165rab5c9689.151ENSPNYG00000015851-10087.838Pundamilia_nyererei
ENSNBRG00000018165rab5c10095.928ENSPNAG00000028138rab5c10095.928Pygocentrus_nattereri
ENSNBRG00000018165rab5c9589.474ENSPNAG00000002218-9989.048Pygocentrus_nattereri
ENSNBRG00000018165rab5c9891.667ENSRNOG00000018568Rab5c9988.889Rattus_norvegicus
ENSNBRG00000018165rab5c9891.204ENSRBIG00000031376RAB5C9988.889Rhinopithecus_bieti
ENSNBRG00000018165rab5c9891.204ENSRROG00000032895RAB5C9988.889Rhinopithecus_roxellana
ENSNBRG00000018165rab5c9891.204ENSSBOG00000032552-9988.426Saimiri_boliviensis_boliviensis
ENSNBRG00000018165rab5c9891.667ENSSHAG00000005267-9989.352Sarcophilus_harrisii
ENSNBRG00000018165rab5c10086.364ENSSFOG00015009988-10086.364Scleropages_formosus
ENSNBRG00000018165rab5c9596.651ENSSMAG00000007323rab5c10095.455Scophthalmus_maximus
ENSNBRG00000018165rab5c10096.364ENSSDUG00000023008rab5c10096.364Seriola_dumerili
ENSNBRG00000018165rab5c10095.455ENSSLDG00000017771rab5c10095.455Seriola_lalandi_dorsalis
ENSNBRG00000018165rab5c9891.204ENSSPUG00000012950-9988.889Sphenodon_punctatus
ENSNBRG00000018165rab5c10098.636ENSSPAG00000006436rab5c10098.636Stegastes_partitus
ENSNBRG00000018165rab5c9891.204ENSSSCG00000032467RAB5C9988.426Sus_scrofa
ENSNBRG00000018165rab5c10095.000ENSTRUG00000015590rab5c10095.000Takifugu_rubripes
ENSNBRG00000018165rab5c9697.156ENSTNIG00000011711rab5c9597.156Tetraodon_nigroviridis
ENSNBRG00000018165rab5c9891.204ENSTBEG00000007092RAB5C9988.889Tupaia_belangeri
ENSNBRG00000018165rab5c9890.278ENSTTRG00000006673RAB5C9987.963Tursiops_truncatus
ENSNBRG00000018165rab5c9891.204ENSUAMG00000024343RAB5C9988.889Ursus_americanus
ENSNBRG00000018165rab5c9891.204ENSUMAG00000023270RAB5C9988.889Ursus_maritimus
ENSNBRG00000018165rab5c10096.364ENSXCOG00000016788rab5c10096.364Xiphophorus_couchianus
ENSNBRG00000018165rab5c9590.909ENSXCOG00000006300-9988.739Xiphophorus_couchianus
ENSNBRG00000018165rab5c9989.041ENSXMAG00000022179-10089.041Xiphophorus_maculatus
ENSNBRG00000018165rab5c10096.364ENSXMAG00000003266rab5c10096.364Xiphophorus_maculatus

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