EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000018350 (Gene tree)
Gene ID: -
Gene Symbol: rpf1
Alias: bxdc5|zgc:86604
Full Name: ribosome production factor 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4670 bases
Position: chrJH422295.1:2029363-2034032
Accession: 102790077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000024011	Brix	PF04427.18	6.7e-10	1	1
ENSNBRP00000024020	Brix	PF04427.18	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000024654	-	612	-	ENSNBRP00000024028	203 (aa)	-	-
ENSNBRT00000024635	-	714	-	ENSNBRP00000024011	237 (aa)	-	-
ENSNBRT00000024646	-	708	XM_006792062	ENSNBRP00000024020	235 (aa)	XP_006792125	-

Gene Model

Click here to download ENSNBRG00000018350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000018350	rpf1	82	68.627	ENSG00000117133	RPF1	74	54.167	Homo_sapiens
ENSNBRG00000018350	rpf1	95	71.667	ENSAPOG00000022055	rpf1	68	73.444	Acanthochromis_polyacanthus
ENSNBRG00000018350	rpf1	95	84.874	ENSACIG00000014158	rpf1	67	82.773	Amphilophus_citrinellus
ENSNBRG00000018350	rpf1	95	71.193	ENSAOCG00000012163	rpf1	68	74.074	Amphiprion_ocellaris
ENSNBRG00000018350	rpf1	95	72.500	ENSAPEG00000004908	rpf1	68	75.833	Amphiprion_percula
ENSNBRG00000018350	rpf1	95	74.684	ENSATEG00000010855	rpf1	67	76.151	Anabas_testudineus
ENSNBRG00000018350	rpf1	66	76.923	ENSAPLG00000016382	RPF1	52	82.517	Anas_platyrhynchos
ENSNBRG00000018350	rpf1	89	65.179	ENSACAG00000005753	RPF1	61	66.667	Anolis_carolinensis
ENSNBRG00000018350	rpf1	83	67.633	ENSANAG00000035706	-	59	66.825	Aotus_nancymaae
ENSNBRG00000018350	rpf1	83	62.085	ENSANAG00000035829	-	61	61.574	Aotus_nancymaae
ENSNBRG00000018350	rpf1	95	91.453	ENSACLG00000001707	rpf1	69	91.453	Astatotilapia_calliptera
ENSNBRG00000018350	rpf1	75	83.957	ENSAMXG00000041217	rpf1	75	70.248	Astyanax_mexicanus
ENSNBRG00000018350	rpf1	83	67.150	ENSBTAG00000008118	RPF1	58	67.150	Bos_taurus
ENSNBRG00000018350	rpf1	70	30.814	WBGene00014083	ZK795.3	56	30.814	Caenorhabditis_elegans
ENSNBRG00000018350	rpf1	92	64.069	ENSCJAG00000007400	RPF1	59	67.299	Callithrix_jacchus
ENSNBRG00000018350	rpf1	81	66.832	ENSCAFG00000020311	RPF1	61	65.116	Canis_familiaris
ENSNBRG00000018350	rpf1	81	66.832	ENSCAFG00020014296	RPF1	61	65.116	Canis_lupus_dingo
ENSNBRG00000018350	rpf1	90	64.035	ENSCHIG00000012566	-	58	66.667	Capra_hircus
ENSNBRG00000018350	rpf1	90	64.035	ENSCHIG00000006618	-	58	66.667	Capra_hircus
ENSNBRG00000018350	rpf1	94	60.851	ENSTSYG00000009961	RPF1	58	66.832	Carlito_syrichta
ENSNBRG00000018350	rpf1	89	64.317	ENSCPOG00000014316	RPF1	58	67.157	Cavia_porcellus
ENSNBRG00000018350	rpf1	83	67.633	ENSCCAG00000038077	RPF1	59	66.825	Cebus_capucinus
ENSNBRG00000018350	rpf1	89	56.889	ENSCATG00000010531	RPF1	56	68.927	Cercocebus_atys
ENSNBRG00000018350	rpf1	94	61.277	ENSCLAG00000007607	RPF1	58	67.317	Chinchilla_lanigera
ENSNBRG00000018350	rpf1	82	60.000	ENSCSAG00000001417	-	58	60.000	Chlorocebus_sabaeus
ENSNBRG00000018350	rpf1	86	65.297	ENSCSAG00000018855	-	58	67.317	Chlorocebus_sabaeus
ENSNBRG00000018350	rpf1	84	66.029	ENSCHOG00000003320	-	63	66.029	Choloepus_hoffmanni
ENSNBRG00000018350	rpf1	84	67.925	ENSCPBG00000025911	RPF1	65	66.977	Chrysemys_picta_bellii
ENSNBRG00000018350	rpf1	74	50.000	ENSCING00000007514	-	52	50.000	Ciona_intestinalis
ENSNBRG00000018350	rpf1	74	52.717	ENSCSAVG00000003642	-	62	52.717	Ciona_savignyi
ENSNBRG00000018350	rpf1	82	68.137	ENSCANG00000042634	RPF1	58	67.805	Colobus_angolensis_palliatus
ENSNBRG00000018350	rpf1	90	65.639	ENSCGRG00001001189	Rpf1	58	68.780	Cricetulus_griseus_chok1gshd
ENSNBRG00000018350	rpf1	59	79.856	ENSCGRG00000008483	Rpf1	52	75.484	Cricetulus_griseus_crigri
ENSNBRG00000018350	rpf1	95	73.109	ENSCSEG00000009153	rpf1	67	73.109	Cynoglossus_semilaevis
ENSNBRG00000018350	rpf1	95	73.029	ENSCVAG00000000086	rpf1	68	72.653	Cyprinodon_variegatus
ENSNBRG00000018350	rpf1	90	74.324	ENSDARG00000005738	rpf1	88	75.909	Danio_rerio
ENSNBRG00000018350	rpf1	91	62.174	ENSDNOG00000004140	-	59	64.115	Dasypus_novemcinctus
ENSNBRG00000018350	rpf1	89	65.455	ENSDORG00000000607	Rpf1	54	72.251	Dipodomys_ordii
ENSNBRG00000018350	rpf1	73	68.306	ENSETEG00000002755	-	59	64.115	Echinops_telfairi
ENSNBRG00000018350	rpf1	89	64.192	ENSEASG00005014158	RPF1	58	67.633	Equus_asinus_asinus
ENSNBRG00000018350	rpf1	93	62.447	ENSECAG00000019661	RPF1	58	67.633	Equus_caballus
ENSNBRG00000018350	rpf1	90	60.352	ENSEEUG00000001097	-	58	66.019	Erinaceus_europaeus
ENSNBRG00000018350	rpf1	76	81.383	ENSELUG00000001464	rpf1	54	81.481	Esox_lucius
ENSNBRG00000018350	rpf1	93	60.000	ENSFCAG00000025546	RPF1	58	65.385	Felis_catus
ENSNBRG00000018350	rpf1	84	70.048	ENSFALG00000006037	RPF1	59	68.807	Ficedula_albicollis
ENSNBRG00000018350	rpf1	93	61.277	ENSFDAG00000011922	RPF1	59	66.346	Fukomys_damarensis
ENSNBRG00000018350	rpf1	95	75.104	ENSFHEG00000004209	rpf1	67	75.519	Fundulus_heteroclitus
ENSNBRG00000018350	rpf1	75	81.818	ENSGMOG00000016281	rpf1	55	80.628	Gadus_morhua
ENSNBRG00000018350	rpf1	76	73.158	ENSGALG00000008796	RPF1	58	67.593	Gallus_gallus
ENSNBRG00000018350	rpf1	95	74.059	ENSGAFG00000016123	rpf1	68	73.251	Gambusia_affinis
ENSNBRG00000018350	rpf1	95	73.640	ENSGACG00000009686	rpf1	67	73.640	Gasterosteus_aculeatus
ENSNBRG00000018350	rpf1	92	63.436	ENSGAGG00000007145	RPF1	65	65.611	Gopherus_agassizii
ENSNBRG00000018350	rpf1	92	63.596	ENSGGOG00000015862	RPF1	58	68.293	Gorilla_gorilla
ENSNBRG00000018350	rpf1	95	91.026	ENSHBUG00000013582	rpf1	67	91.026	Haplochromis_burtoni
ENSNBRG00000018350	rpf1	93	61.277	ENSHGLG00000006653	RPF1	58	66.341	Heterocephalus_glaber_female
ENSNBRG00000018350	rpf1	93	61.277	ENSHGLG00100007263	RPF1	58	66.341	Heterocephalus_glaber_male
ENSNBRG00000018350	rpf1	76	82.979	ENSHCOG00000017548	rpf1	68	74.274	Hippocampus_comes
ENSNBRG00000018350	rpf1	78	81.865	ENSIPUG00000003197	rpf1	67	72.766	Ictalurus_punctatus
ENSNBRG00000018350	rpf1	93	60.426	ENSSTOG00000008635	RPF1	58	66.184	Ictidomys_tridecemlineatus
ENSNBRG00000018350	rpf1	92	63.596	ENSJJAG00000018873	Rpf1	58	67.822	Jaculus_jaculus
ENSNBRG00000018350	rpf1	95	78.947	ENSKMAG00000010792	rpf1	66	79.825	Kryptolebias_marmoratus
ENSNBRG00000018350	rpf1	95	75.309	ENSLBEG00000026810	rpf1	68	75.309	Labrus_bergylta
ENSNBRG00000018350	rpf1	84	69.953	ENSLACG00000014263	RPF1	57	70.892	Latimeria_chalumnae
ENSNBRG00000018350	rpf1	86	71.362	ENSLOCG00000010053	rpf1	53	77.895	Lepisosteus_oculatus
ENSNBRG00000018350	rpf1	82	66.341	ENSLAFG00000007031	RPF1	58	66.667	Loxodonta_africana
ENSNBRG00000018350	rpf1	82	67.805	ENSMFAG00000003788	RPF1	58	67.805	Macaca_fascicularis
ENSNBRG00000018350	rpf1	82	67.805	ENSMMUG00000022181	RPF1	58	67.805	Macaca_mulatta
ENSNBRG00000018350	rpf1	82	67.317	ENSMNEG00000029462	RPF1	58	67.317	Macaca_nemestrina
ENSNBRG00000018350	rpf1	82	67.805	ENSMLEG00000038165	RPF1	58	67.805	Mandrillus_leucophaeus
ENSNBRG00000018350	rpf1	79	84.343	ENSMAMG00000022342	rpf1	68	75.918	Mastacembelus_armatus
ENSNBRG00000018350	rpf1	95	91.026	ENSMZEG00005000192	rpf1	67	91.026	Maylandia_zebra
ENSNBRG00000018350	rpf1	59	81.295	ENSMGAG00000009207	RPF1	52	81.295	Meleagris_gallopavo
ENSNBRG00000018350	rpf1	76	71.204	ENSMAUG00000006030	Rpf1	59	66.822	Mesocricetus_auratus
ENSNBRG00000018350	rpf1	90	63.717	ENSMICG00000015146	-	54	70.000	Microcebus_murinus
ENSNBRG00000018350	rpf1	90	56.195	ENSMICG00000012349	-	51	61.579	Microcebus_murinus
ENSNBRG00000018350	rpf1	90	53.097	ENSMICG00000003093	-	52	57.368	Microcebus_murinus
ENSNBRG00000018350	rpf1	84	66.667	ENSMOCG00000018274	Rpf1	54	71.204	Microtus_ochrogaster
ENSNBRG00000018350	rpf1	95	77.637	ENSMMOG00000008932	rpf1	67	76.793	Mola_mola
ENSNBRG00000018350	rpf1	92	62.661	ENSMODG00000000452	RPF1	59	66.825	Monodelphis_domestica
ENSNBRG00000018350	rpf1	95	75.314	ENSMALG00000017197	rpf1	67	76.569	Monopterus_albus
ENSNBRG00000018350	rpf1	90	63.636	MGP_CAROLIEiJ_G0025726	Rpf1	59	66.509	Mus_caroli
ENSNBRG00000018350	rpf1	90	63.636	ENSMUSG00000028187	Rpf1	59	66.509	Mus_musculus
ENSNBRG00000018350	rpf1	59	78.417	MGP_PahariEiJ_G0027177	-	55	74.194	Mus_pahari
ENSNBRG00000018350	rpf1	90	63.636	MGP_SPRETEiJ_G0026679	Rpf1	59	66.509	Mus_spretus
ENSNBRG00000018350	rpf1	94	61.702	ENSMPUG00000005736	-	58	67.633	Mustela_putorius_furo
ENSNBRG00000018350	rpf1	90	64.758	ENSMLUG00000016028	RPF1	59	68.116	Myotis_lucifugus
ENSNBRG00000018350	rpf1	76	70.681	ENSNGAG00000018028	Rpf1	59	66.355	Nannospalax_galili
ENSNBRG00000018350	rpf1	72	70.718	ENSNLEG00000009930	RPF1	57	70.718	Nomascus_leucogenys
ENSNBRG00000018350	rpf1	89	44.934	ENSOPRG00000002637	RPF1	54	48.691	Ochotona_princeps
ENSNBRG00000018350	rpf1	92	58.296	ENSODEG00000003080	-	57	63.212	Octodon_degus
ENSNBRG00000018350	rpf1	90	47.685	ENSODEG00000001180	-	55	49.479	Octodon_degus
ENSNBRG00000018350	rpf1	90	63.596	ENSODEG00000003070	-	58	66.176	Octodon_degus
ENSNBRG00000018350	rpf1	95	91.026	ENSONIG00000007393	rpf1	67	91.026	Oreochromis_niloticus
ENSNBRG00000018350	rpf1	89	64.286	ENSOCUG00000014803	RPF1	58	67.317	Oryctolagus_cuniculus
ENSNBRG00000018350	rpf1	87	75.926	ENSORLG00000006245	rpf1	59	77.725	Oryzias_latipes
ENSNBRG00000018350	rpf1	95	70.370	ENSORLG00020020490	rpf1	68	71.901	Oryzias_latipes_hni
ENSNBRG00000018350	rpf1	95	71.193	ENSORLG00015015775	rpf1	68	72.314	Oryzias_latipes_hsok
ENSNBRG00000018350	rpf1	95	74.895	ENSOMEG00000018084	rpf1	68	74.895	Oryzias_melastigma
ENSNBRG00000018350	rpf1	93	61.702	ENSOGAG00000004642	RPF1	58	67.317	Otolemur_garnettii
ENSNBRG00000018350	rpf1	90	64.035	ENSOARG00000013867	RPF1	58	66.667	Ovis_aries
ENSNBRG00000018350	rpf1	82	68.627	ENSPPAG00000038610	RPF1	58	68.293	Pan_paniscus
ENSNBRG00000018350	rpf1	93	60.759	ENSPPRG00000009777	RPF1	58	65.700	Panthera_pardus
ENSNBRG00000018350	rpf1	93	60.759	ENSPTIG00000019164	RPF1	58	65.700	Panthera_tigris_altaica
ENSNBRG00000018350	rpf1	82	68.627	ENSPTRG00000000901	RPF1	58	68.293	Pan_troglodytes
ENSNBRG00000018350	rpf1	82	67.317	ENSPANG00000010052	RPF1	58	67.317	Papio_anubis
ENSNBRG00000018350	rpf1	76	80.851	ENSPKIG00000001892	rpf1	54	81.283	Paramormyrops_kingsleyae
ENSNBRG00000018350	rpf1	90	63.319	ENSPSIG00000017437	RPF1	57	70.619	Pelodiscus_sinensis
ENSNBRG00000018350	rpf1	95	73.029	ENSPMGG00000011430	rpf1	68	73.140	Periophthalmus_magnuspinnatus
ENSNBRG00000018350	rpf1	82	67.157	ENSPEMG00000023196	Rpf1	59	66.351	Peromyscus_maniculatus_bairdii
ENSNBRG00000018350	rpf1	90	62.174	ENSPCIG00000006692	RPF1	54	71.579	Phascolarctos_cinereus
ENSNBRG00000018350	rpf1	95	73.333	ENSPFOG00000023197	rpf1	68	72.131	Poecilia_formosa
ENSNBRG00000018350	rpf1	95	72.917	ENSPLAG00000007428	rpf1	68	71.721	Poecilia_latipinna
ENSNBRG00000018350	rpf1	95	74.167	ENSPMEG00000013163	rpf1	68	72.951	Poecilia_mexicana
ENSNBRG00000018350	rpf1	95	75.417	ENSPREG00000014542	rpf1	68	74.180	Poecilia_reticulata
ENSNBRG00000018350	rpf1	78	68.718	ENSPPYG00000001206	RPF1	60	65.566	Pongo_abelii
ENSNBRG00000018350	rpf1	77	62.371	ENSPCAG00000015666	RPF1	50	64.571	Procavia_capensis
ENSNBRG00000018350	rpf1	90	62.832	ENSPCOG00000022483	RPF1	54	69.110	Propithecus_coquereli
ENSNBRG00000018350	rpf1	89	63.717	ENSPVAG00000003729	RPF1	58	67.150	Pteropus_vampyrus
ENSNBRG00000018350	rpf1	95	91.453	ENSPNYG00000022917	rpf1	67	91.453	Pundamilia_nyererei
ENSNBRG00000018350	rpf1	76	82.979	ENSPNAG00000015738	rpf1	67	72.689	Pygocentrus_nattereri
ENSNBRG00000018350	rpf1	84	67.633	ENSRNOG00000015969	Rpf1	55	68.812	Rattus_norvegicus
ENSNBRG00000018350	rpf1	82	67.805	ENSRBIG00000031747	RPF1	58	67.805	Rhinopithecus_bieti
ENSNBRG00000018350	rpf1	82	67.805	ENSRROG00000038090	RPF1	58	67.805	Rhinopithecus_roxellana
ENSNBRG00000018350	rpf1	67	38.889	YHR088W	-	52	38.889	Saccharomyces_cerevisiae
ENSNBRG00000018350	rpf1	82	45.833	ENSSBOG00000023599	-	52	45.596	Saimiri_boliviensis_boliviensis
ENSNBRG00000018350	rpf1	92	63.319	ENSSBOG00000020439	RPF1	54	71.728	Saimiri_boliviensis_boliviensis
ENSNBRG00000018350	rpf1	59	80.576	ENSSHAG00000017559	RPF1	55	76.129	Sarcophilus_harrisii
ENSNBRG00000018350	rpf1	81	77.723	ENSSFOG00015021492	rpf1	57	77.723	Scleropages_formosus
ENSNBRG00000018350	rpf1	95	75.000	ENSSDUG00000003879	rpf1	74	77.500	Seriola_dumerili
ENSNBRG00000018350	rpf1	95	76.250	ENSSLDG00000018407	rpf1	68	77.083	Seriola_lalandi_dorsalis
ENSNBRG00000018350	rpf1	84	65.700	ENSSARG00000011380	RPF1	59	65.094	Sorex_araneus
ENSNBRG00000018350	rpf1	82	67.647	ENSSPUG00000016759	RPF1	62	67.647	Sphenodon_punctatus
ENSNBRG00000018350	rpf1	81	67.822	ENSSSCG00000022145	RPF1	58	67.822	Sus_scrofa
ENSNBRG00000018350	rpf1	84	70.531	ENSTGUG00000006591	RPF1	63	69.811	Taeniopygia_guttata
ENSNBRG00000018350	rpf1	95	74.370	ENSTRUG00000023749	rpf1	73	73.529	Takifugu_rubripes
ENSNBRG00000018350	rpf1	85	78.972	ENSTNIG00000015558	rpf1	61	78.972	Tetraodon_nigroviridis
ENSNBRG00000018350	rpf1	93	62.332	ENSTBEG00000013368	-	56	68.750	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000015180	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000012455	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000006713	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000003033	-	56	68.912	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000010671	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000014370	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.332	ENSTBEG00000006952	-	56	68.750	Tupaia_belangeri
ENSNBRG00000018350	rpf1	91	64.220	ENSTBEG00000014636	-	82	65.049	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	61.435	ENSTBEG00000006259	-	67	67.708	Tupaia_belangeri
ENSNBRG00000018350	rpf1	90	57.277	ENSTBEG00000012128	-	50	63.128	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000008089	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000004509	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000006218	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000013438	-	63	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.332	ENSTBEG00000000840	-	56	68.750	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.332	ENSTBEG00000017049	-	56	68.750	Tupaia_belangeri
ENSNBRG00000018350	rpf1	91	62.844	ENSTBEG00000001988	-	56	67.358	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000016806	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000017071	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	82	68.912	ENSTBEG00000006898	-	60	68.912	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	62.780	ENSTBEG00000006948	-	56	69.271	Tupaia_belangeri
ENSNBRG00000018350	rpf1	93	51.064	ENSTBEG00000013600	-	58	55.122	Tupaia_belangeri
ENSNBRG00000018350	rpf1	90	64.602	ENSTTRG00000000789	RPF1	58	68.317	Tursiops_truncatus
ENSNBRG00000018350	rpf1	93	61.181	ENSUAMG00000001406	RPF1	58	67.150	Ursus_americanus
ENSNBRG00000018350	rpf1	93	61.181	ENSUMAG00000002636	RPF1	58	67.150	Ursus_maritimus
ENSNBRG00000018350	rpf1	90	63.158	ENSVPAG00000005882	RPF1	58	66.832	Vicugna_pacos
ENSNBRG00000018350	rpf1	77	67.188	ENSVVUG00000017435	-	57	67.188	Vulpes_vulpes
ENSNBRG00000018350	rpf1	90	57.589	ENSVVUG00000024183	-	57	61.353	Vulpes_vulpes
ENSNBRG00000018350	rpf1	72	30.409	ENSVVUG00000005007	IMP4	52	30.409	Vulpes_vulpes
ENSNBRG00000018350	rpf1	81	65.347	ENSVVUG00000030076	-	61	63.721	Vulpes_vulpes
ENSNBRG00000018350	rpf1	80	69.000	ENSXETG00000008642	rpf1	58	69.347	Xenopus_tropicalis
ENSNBRG00000018350	rpf1	95	73.109	ENSXMAG00000017969	rpf1	68	72.314	Xiphophorus_maculatus