EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000018772 (Gene tree)
Gene ID: 102782005
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5294 bases
Position: chrJH422278.1:13448865-13454158
Accession: 102782005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000024544	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000025190	-	1742	XM_006783815	ENSNBRP00000024544	198 (aa)	XP_006783878	UPI0003AFC96E

Gene Model

Click here to download ENSNBRG00000018772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000018772	sar1ab	64	34.091	ENSNBRG00000020745	arl4cb	67	34.091
ENSNBRG00000018772	sar1ab	62	39.344	ENSNBRG00000006393	arl2	73	39.344
ENSNBRG00000018772	sar1ab	100	78.788	ENSNBRG00000014004	-	100	78.788
ENSNBRG00000018772	sar1ab	64	36.220	ENSNBRG00000004078	arl13b	51	36.220
ENSNBRG00000018772	sar1ab	64	33.333	ENSNBRG00000018555	-	66	33.333
ENSNBRG00000018772	sar1ab	73	32.639	ENSNBRG00000017218	arf3b	68	32.639
ENSNBRG00000018772	sar1ab	87	30.814	ENSNBRG00000007962	arl3	88	30.814
ENSNBRG00000018772	sar1ab	90	31.148	ENSNBRG00000004364	-	89	31.148
ENSNBRG00000018772	sar1ab	72	32.168	ENSNBRG00000011196	-	79	32.168
ENSNBRG00000018772	sar1ab	67	33.835	ENSNBRG00000016455	-	74	33.835
ENSNBRG00000018772	sar1ab	68	34.074	ENSNBRG00000020245	arl5c	82	34.074
ENSNBRG00000018772	sar1ab	64	34.091	ENSNBRG00000015182	-	67	34.091
ENSNBRG00000018772	sar1ab	86	32.749	ENSNBRG00000005929	-	85	32.749
ENSNBRG00000018772	sar1ab	92	30.601	ENSNBRG00000019783	arl1	93	30.601
ENSNBRG00000018772	sar1ab	73	33.103	ENSNBRG00000023803	arf2b	79	33.103
ENSNBRG00000018772	sar1ab	77	31.373	ENSNBRG00000010663	arl8a	75	31.373
ENSNBRG00000018772	sar1ab	95	31.217	ENSNBRG00000010560	arl3l2	95	31.217
ENSNBRG00000018772	sar1ab	100	80.303	ENSNBRG00000008013	sar1b	100	80.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000018772	sar1ab	100	96.970	ENSACIG00000019827	sar1ab	100	96.970	Amphilophus_citrinellus
ENSNBRG00000018772	sar1ab	100	91.919	ENSAOCG00000022062	sar1ab	100	91.919	Amphiprion_ocellaris
ENSNBRG00000018772	sar1ab	100	91.919	ENSAPEG00000011525	sar1ab	100	91.919	Amphiprion_percula
ENSNBRG00000018772	sar1ab	100	90.909	ENSATEG00000003466	sar1ab	100	90.909	Anabas_testudineus
ENSNBRG00000018772	sar1ab	100	99.495	ENSACLG00000013053	sar1ab	100	99.495	Astatotilapia_calliptera
ENSNBRG00000018772	sar1ab	100	87.879	ENSCSEG00000004825	sar1ab	100	87.879	Cynoglossus_semilaevis
ENSNBRG00000018772	sar1ab	100	76.263	ENSCVAG00000006500	-	100	76.263	Cyprinodon_variegatus
ENSNBRG00000018772	sar1ab	100	91.414	ENSCVAG00000015162	sar1ab	100	91.414	Cyprinodon_variegatus
ENSNBRG00000018772	sar1ab	100	84.848	ENSDARG00000033320	sar1ab	100	84.848	Danio_rerio
ENSNBRG00000018772	sar1ab	100	79.293	ENSELUG00000013652	sar1a	100	79.293	Esox_lucius
ENSNBRG00000018772	sar1ab	100	87.374	ENSELUG00000024279	sar1ab	100	87.374	Esox_lucius
ENSNBRG00000018772	sar1ab	100	77.778	ENSFHEG00000012352	-	100	77.778	Fundulus_heteroclitus
ENSNBRG00000018772	sar1ab	100	89.394	ENSFHEG00000021773	sar1ab	100	89.394	Fundulus_heteroclitus
ENSNBRG00000018772	sar1ab	100	86.364	ENSGMOG00000012588	sar1ab	100	86.364	Gadus_morhua
ENSNBRG00000018772	sar1ab	100	91.414	ENSGAFG00000009702	sar1ab	100	91.414	Gambusia_affinis
ENSNBRG00000018772	sar1ab	100	77.778	ENSGAFG00000004846	-	98	81.197	Gambusia_affinis
ENSNBRG00000018772	sar1ab	100	87.879	ENSGACG00000008616	sar1ab	100	87.879	Gasterosteus_aculeatus
ENSNBRG00000018772	sar1ab	100	99.495	ENSHBUG00000021221	sar1ab	100	99.495	Haplochromis_burtoni
ENSNBRG00000018772	sar1ab	100	87.374	ENSHCOG00000002845	sar1ab	80	87.374	Hippocampus_comes
ENSNBRG00000018772	sar1ab	100	92.424	ENSKMAG00000018006	sar1ab	100	92.424	Kryptolebias_marmoratus
ENSNBRG00000018772	sar1ab	100	90.404	ENSLBEG00000001114	sar1ab	100	90.404	Labrus_bergylta
ENSNBRG00000018772	sar1ab	100	89.899	ENSMAMG00000021314	sar1ab	100	89.899	Mastacembelus_armatus
ENSNBRG00000018772	sar1ab	100	99.495	ENSMZEG00005027606	sar1ab	100	99.495	Maylandia_zebra
ENSNBRG00000018772	sar1ab	100	89.394	ENSMMOG00000010360	sar1ab	100	89.394	Mola_mola
ENSNBRG00000018772	sar1ab	100	89.394	ENSMALG00000005831	sar1ab	100	89.394	Monopterus_albus
ENSNBRG00000018772	sar1ab	100	98.990	ENSONIG00000018509	sar1ab	100	98.990	Oreochromis_niloticus
ENSNBRG00000018772	sar1ab	100	78.788	ENSORLG00000009132	-	90	78.788	Oryzias_latipes
ENSNBRG00000018772	sar1ab	100	90.404	ENSORLG00000006779	sar1ab	67	90.404	Oryzias_latipes
ENSNBRG00000018772	sar1ab	100	78.788	ENSORLG00020007024	-	90	78.788	Oryzias_latipes_hni
ENSNBRG00000018772	sar1ab	100	89.899	ENSORLG00020005458	sar1ab	100	89.899	Oryzias_latipes_hni
ENSNBRG00000018772	sar1ab	100	78.283	ENSORLG00015006223	-	94	83.036	Oryzias_latipes_hsok
ENSNBRG00000018772	sar1ab	100	90.404	ENSORLG00015010542	sar1ab	100	90.404	Oryzias_latipes_hsok
ENSNBRG00000018772	sar1ab	100	78.283	ENSOMEG00000012020	-	100	78.283	Oryzias_melastigma
ENSNBRG00000018772	sar1ab	100	92.424	ENSOMEG00000004948	sar1ab	100	92.424	Oryzias_melastigma
ENSNBRG00000018772	sar1ab	100	81.818	ENSPKIG00000007615	sar1ab	100	81.818	Paramormyrops_kingsleyae
ENSNBRG00000018772	sar1ab	100	89.899	ENSPMGG00000013330	sar1ab	100	89.899	Periophthalmus_magnuspinnatus
ENSNBRG00000018772	sar1ab	100	92.424	ENSPFOG00000023432	sar1ab	100	92.424	Poecilia_formosa
ENSNBRG00000018772	sar1ab	100	92.424	ENSPLAG00000023705	sar1ab	100	92.424	Poecilia_latipinna
ENSNBRG00000018772	sar1ab	100	92.424	ENSPMEG00000000559	sar1ab	100	92.424	Poecilia_mexicana
ENSNBRG00000018772	sar1ab	100	77.273	ENSPMEG00000001717	-	100	77.273	Poecilia_mexicana
ENSNBRG00000018772	sar1ab	100	92.424	ENSPREG00000016098	sar1ab	100	92.424	Poecilia_reticulata
ENSNBRG00000018772	sar1ab	100	100.000	ENSPNYG00000011603	sar1ab	100	100.000	Pundamilia_nyererei
ENSNBRG00000018772	sar1ab	100	85.354	ENSPNAG00000008007	sar1ab	100	85.354	Pygocentrus_nattereri
ENSNBRG00000018772	sar1ab	100	83.333	ENSSFOG00015014010	sar1a	100	83.333	Scleropages_formosus
ENSNBRG00000018772	sar1ab	72	76.224	ENSSMAG00000020758	sar1ab	95	76.224	Scophthalmus_maximus
ENSNBRG00000018772	sar1ab	100	89.899	ENSSDUG00000010773	sar1ab	100	89.899	Seriola_dumerili
ENSNBRG00000018772	sar1ab	100	89.899	ENSSLDG00000025558	sar1ab	100	89.899	Seriola_lalandi_dorsalis
ENSNBRG00000018772	sar1ab	100	92.929	ENSSPAG00000009194	sar1ab	100	92.929	Stegastes_partitus
ENSNBRG00000018772	sar1ab	100	89.899	ENSTRUG00000007269	sar1ab	100	89.899	Takifugu_rubripes
ENSNBRG00000018772	sar1ab	100	89.899	ENSTNIG00000008635	sar1ab	100	89.899	Tetraodon_nigroviridis
ENSNBRG00000018772	sar1ab	100	91.919	ENSXMAG00000003130	sar1ab	100	91.919	Xiphophorus_maculatus
ENSNBRG00000018772	sar1ab	100	78.283	ENSXMAG00000026223	SAR1A	98	81.197	Xiphophorus_maculatus