EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000018865 (Gene tree)
Gene ID: 102795945
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 14256 bases
Position: chrJH422284.1:7586810-7601065
Accession: 102795945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000024734	ResIII	PF04851.15	1.3e-08	1	1
ENSNBRP00000024734	BRK	PF07533.16	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000025384	-	4173	XM_006787382	ENSNBRP00000024734	1390 (aa)	XP_006787445	-

Gene Model

Click here to download ENSNBRG00000018865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000018865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000018865	-	95	63.757	ENSNBRG00000017998	SMARCA2	94	80.100
ENSNBRG00000018865	-	99	86.567	ENSNBRG00000011457	smarca4a	90	87.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000018865	-	99	80.964	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSNBRG00000018865	-	78	88.574	ENSAPOG00000003509	smarca4a	86	87.751	Acanthochromis_polyacanthus
ENSNBRG00000018865	-	100	96.559	ENSAPOG00000004542	SMARCA4	100	96.559	Acanthochromis_polyacanthus
ENSNBRG00000018865	-	99	85.913	ENSAMEG00000010868	SMARCA4	90	78.278	Ailuropoda_melanoleuca
ENSNBRG00000018865	-	99	97.768	ENSACIG00000003035	-	91	97.768	Amphilophus_citrinellus
ENSNBRG00000018865	-	99	84.441	ENSACIG00000021550	smarca4a	89	84.225	Amphilophus_citrinellus
ENSNBRG00000018865	-	99	93.746	ENSAOCG00000009450	-	93	93.607	Amphiprion_ocellaris
ENSNBRG00000018865	-	99	86.780	ENSAOCG00000019167	smarca4a	99	87.260	Amphiprion_ocellaris
ENSNBRG00000018865	-	99	86.851	ENSAPEG00000015559	smarca4a	99	87.331	Amphiprion_percula
ENSNBRG00000018865	-	99	94.265	ENSAPEG00000023108	-	88	94.265	Amphiprion_percula
ENSNBRG00000018865	-	99	84.954	ENSATEG00000011524	smarca4a	89	84.236	Anabas_testudineus
ENSNBRG00000018865	-	100	92.667	ENSATEG00000001094	-	98	92.236	Anabas_testudineus
ENSNBRG00000018865	-	99	86.130	ENSANAG00000036991	SMARCA4	90	78.160	Aotus_nancymaae
ENSNBRG00000018865	-	99	85.595	ENSACLG00000000163	smarca4a	91	84.315	Astatotilapia_calliptera
ENSNBRG00000018865	-	99	98.848	ENSACLG00000008638	-	92	98.848	Astatotilapia_calliptera
ENSNBRG00000018865	-	99	86.452	ENSAMXG00000021023	smarca4a	90	86.227	Astyanax_mexicanus
ENSNBRG00000018865	-	100	89.594	ENSAMXG00000011238	-	96	89.474	Astyanax_mexicanus
ENSNBRG00000018865	-	77	89.651	ENSCJAG00000005936	SMARCA4	90	78.293	Callithrix_jacchus
ENSNBRG00000018865	-	99	84.781	ENSCAFG00020024620	SMARCA4	90	83.135	Canis_lupus_dingo
ENSNBRG00000018865	-	99	84.466	ENSTSYG00000012966	SMARCA4	85	90.909	Carlito_syrichta
ENSNBRG00000018865	-	99	82.509	ENSCAPG00000015932	SMARCA4	94	81.857	Cavia_aperea
ENSNBRG00000018865	-	99	86.116	ENSCATG00000029530	SMARCA4	89	82.296	Cercocebus_atys
ENSNBRG00000018865	-	99	85.167	ENSCLAG00000011946	SMARCA4	89	84.958	Chinchilla_lanigera
ENSNBRG00000018865	-	99	87.312	ENSCANG00000036013	SMARCA4	89	82.296	Colobus_angolensis_palliatus
ENSNBRG00000018865	-	96	83.857	ENSCSEG00000014771	smarca4a	90	83.630	Cynoglossus_semilaevis
ENSNBRG00000018865	-	99	91.928	ENSCVAG00000003018	-	91	90.605	Cyprinodon_variegatus
ENSNBRG00000018865	-	99	84.124	ENSCVAG00000006979	smarca4a	90	83.780	Cyprinodon_variegatus
ENSNBRG00000018865	-	99	84.820	ENSDARG00000077226	smarca4a	89	83.071	Danio_rerio
ENSNBRG00000018865	-	96	83.501	ENSDARG00000104339	SMARCA4	89	83.488	Danio_rerio
ENSNBRG00000018865	-	83	83.225	ENSDNOG00000048847	SMARCA4	81	90.276	Dasypus_novemcinctus
ENSNBRG00000018865	-	99	75.483	ENSETEG00000013361	SMARCA4	89	71.438	Echinops_telfairi
ENSNBRG00000018865	-	99	84.440	ENSEASG00005006167	SMARCA4	88	84.324	Equus_asinus_asinus
ENSNBRG00000018865	-	99	86.506	ENSELUG00000010247	smarca4a	89	85.633	Esox_lucius
ENSNBRG00000018865	-	99	82.232	ENSELUG00000023232	-	84	82.728	Esox_lucius
ENSNBRG00000018865	-	79	90.926	ENSFALG00000004208	SMARCA4	86	82.225	Ficedula_albicollis
ENSNBRG00000018865	-	99	89.484	ENSFHEG00000007902	-	90	86.239	Fundulus_heteroclitus
ENSNBRG00000018865	-	99	83.005	ENSFHEG00000010182	smarca4a	96	86.052	Fundulus_heteroclitus
ENSNBRG00000018865	-	88	82.898	ENSGMOG00000002649	smarca4a	76	82.941	Gadus_morhua
ENSNBRG00000018865	-	88	85.686	ENSGMOG00000005756	-	75	84.995	Gadus_morhua
ENSNBRG00000018865	-	99	90.171	ENSGAFG00000008827	-	88	89.886	Gambusia_affinis
ENSNBRG00000018865	-	87	88.178	ENSGAFG00000014900	smarca4a	88	86.677	Gambusia_affinis
ENSNBRG00000018865	-	96	83.001	ENSGACG00000006691	smarca4a	89	81.781	Gasterosteus_aculeatus
ENSNBRG00000018865	-	99	85.800	ENSGACG00000016033	-	91	84.260	Gasterosteus_aculeatus
ENSNBRG00000018865	-	99	87.973	ENSGGOG00000009882	SMARCA4	90	85.597	Gorilla_gorilla
ENSNBRG00000018865	-	99	99.856	ENSHBUG00000005447	-	92	99.856	Haplochromis_burtoni
ENSNBRG00000018865	-	99	85.665	ENSHBUG00000021172	smarca4a	88	85.734	Haplochromis_burtoni
ENSNBRG00000018865	-	99	83.815	ENSHGLG00100013774	SMARCA4	89	81.975	Heterocephalus_glaber_male
ENSNBRG00000018865	-	99	84.110	ENSHCOG00000009510	smarca4a	91	83.904	Hippocampus_comes
ENSNBRG00000018865	-	99	85.491	ENSIPUG00000006107	smarca4a	91	85.378	Ictalurus_punctatus
ENSNBRG00000018865	-	97	87.447	ENSIPUG00000016346	-	86	85.683	Ictalurus_punctatus
ENSNBRG00000018865	-	99	91.238	ENSKMAG00000019518	-	92	89.221	Kryptolebias_marmoratus
ENSNBRG00000018865	-	99	85.004	ENSKMAG00000011931	smarca4a	89	85.564	Kryptolebias_marmoratus
ENSNBRG00000018865	-	99	84.388	ENSLBEG00000020655	-	89	84.676	Labrus_bergylta
ENSNBRG00000018865	-	99	84.637	ENSLBEG00000017383	smarca4a	92	84.008	Labrus_bergylta
ENSNBRG00000018865	-	56	77.831	ENSLACG00000015309	SMARCA4	100	73.976	Latimeria_chalumnae
ENSNBRG00000018865	-	99	83.264	ENSLOCG00000007820	smarca4a	67	93.197	Lepisosteus_oculatus
ENSNBRG00000018865	-	99	84.861	ENSLAFG00000001433	SMARCA4	89	82.333	Loxodonta_africana
ENSNBRG00000018865	-	99	87.239	ENSMFAG00000032146	SMARCA4	90	80.329	Macaca_fascicularis
ENSNBRG00000018865	-	99	80.851	ENSMMUG00000012042	SMARCA4	80	91.954	Macaca_mulatta
ENSNBRG00000018865	-	99	86.116	ENSMNEG00000028512	SMARCA4	89	83.864	Macaca_nemestrina
ENSNBRG00000018865	-	99	86.116	ENSMLEG00000034976	SMARCA4	89	82.126	Mandrillus_leucophaeus
ENSNBRG00000018865	-	99	84.819	ENSMAMG00000009256	smarca4a	89	84.631	Mastacembelus_armatus
ENSNBRG00000018865	-	99	92.463	ENSMAMG00000002841	-	92	92.753	Mastacembelus_armatus
ENSNBRG00000018865	-	99	85.585	ENSMZEG00005003889	smarca4a	90	84.384	Maylandia_zebra
ENSNBRG00000018865	-	99	94.916	ENSMZEG00005023861	-	90	94.916	Maylandia_zebra
ENSNBRG00000018865	-	99	85.284	ENSMICG00000009806	SMARCA4	89	82.195	Microcebus_murinus
ENSNBRG00000018865	-	99	82.111	ENSMMOG00000007571	smarca4a	92	82.317	Mola_mola
ENSNBRG00000018865	-	99	92.380	ENSMMOG00000008466	-	88	92.164	Mola_mola
ENSNBRG00000018865	-	100	95.468	ENSMALG00000021534	-	100	95.468	Monopterus_albus
ENSNBRG00000018865	-	96	85.022	ENSMALG00000003388	smarca4a	89	85.100	Monopterus_albus
ENSNBRG00000018865	-	85	83.228	MGP_CAROLIEiJ_G0031879	Smarca4	98	81.056	Mus_caroli
ENSNBRG00000018865	-	85	83.228	ENSMUSG00000032187	Smarca4	98	81.056	Mus_musculus
ENSNBRG00000018865	-	85	83.228	MGP_SPRETEiJ_G0033003	Smarca4	98	81.056	Mus_spretus
ENSNBRG00000018865	-	98	85.394	ENSNLEG00000012389	SMARCA4	91	81.667	Nomascus_leucogenys
ENSNBRG00000018865	-	88	89.655	ENSOPRG00000000885	-	77	89.655	Ochotona_princeps
ENSNBRG00000018865	-	99	85.436	ENSODEG00000017127	SMARCA4	89	84.836	Octodon_degus
ENSNBRG00000018865	-	99	86.022	ENSONIG00000008196	smarca4a	89	85.396	Oreochromis_niloticus
ENSNBRG00000018865	-	99	93.329	ENSONIG00000018040	-	90	92.520	Oreochromis_niloticus
ENSNBRG00000018865	-	99	80.735	ENSOCUG00000001787	SMARCA4	90	80.126	Oryctolagus_cuniculus
ENSNBRG00000018865	-	96	83.859	ENSORLG00000015452	smarca4a	71	91.833	Oryzias_latipes
ENSNBRG00000018865	-	96	92.158	ENSORLG00000003955	-	99	91.894	Oryzias_latipes
ENSNBRG00000018865	-	96	84.410	ENSORLG00020004611	smarca4a	99	85.064	Oryzias_latipes_hni
ENSNBRG00000018865	-	96	91.716	ENSORLG00020009728	-	98	92.043	Oryzias_latipes_hni
ENSNBRG00000018865	-	100	91.320	ENSORLG00015007739	-	97	91.822	Oryzias_latipes_hsok
ENSNBRG00000018865	-	96	83.716	ENSORLG00015016560	smarca4a	98	81.657	Oryzias_latipes_hsok
ENSNBRG00000018865	-	99	84.207	ENSOMEG00000007486	smarca4a	89	84.287	Oryzias_melastigma
ENSNBRG00000018865	-	99	89.162	ENSOMEG00000016626	-	90	89.516	Oryzias_melastigma
ENSNBRG00000018865	-	99	84.495	ENSOGAG00000016148	SMARCA4	95	89.072	Otolemur_garnettii
ENSNBRG00000018865	-	99	85.082	ENSPPAG00000043191	SMARCA4	90	85.597	Pan_paniscus
ENSNBRG00000018865	-	80	86.753	ENSPTIG00000017447	SMARCA4	89	78.674	Panthera_tigris_altaica
ENSNBRG00000018865	-	99	85.082	ENSPTRG00000010488	SMARCA4	90	85.597	Pan_troglodytes
ENSNBRG00000018865	-	99	86.116	ENSPANG00000011042	SMARCA4	85	88.964	Papio_anubis
ENSNBRG00000018865	-	99	86.529	ENSPKIG00000007770	SMARCA4	89	85.205	Paramormyrops_kingsleyae
ENSNBRG00000018865	-	96	85.766	ENSPKIG00000010087	-	86	84.903	Paramormyrops_kingsleyae
ENSNBRG00000018865	-	83	87.343	ENSPSIG00000005547	SMARCA4	89	80.577	Pelodiscus_sinensis
ENSNBRG00000018865	-	99	88.286	ENSPFOG00000012930	-	90	86.907	Poecilia_formosa
ENSNBRG00000018865	-	84	90.436	ENSPFOG00000007892	smarca4a	89	80.488	Poecilia_formosa
ENSNBRG00000018865	-	99	93.366	ENSPLAG00000018616	-	89	93.296	Poecilia_latipinna
ENSNBRG00000018865	-	99	85.632	ENSPLAG00000014294	smarca4a	89	84.703	Poecilia_latipinna
ENSNBRG00000018865	-	99	92.811	ENSPMEG00000008929	-	89	92.811	Poecilia_mexicana
ENSNBRG00000018865	-	84	90.350	ENSPMEG00000003725	smarca4a	91	80.556	Poecilia_mexicana
ENSNBRG00000018865	-	99	90.733	ENSPREG00000014823	-	88	90.302	Poecilia_reticulata
ENSNBRG00000018865	-	99	82.185	ENSPREG00000014608	smarca4a	89	82.337	Poecilia_reticulata
ENSNBRG00000018865	-	76	76.071	ENSPCAG00000014054	SMARCA4	68	68.226	Procavia_capensis
ENSNBRG00000018865	-	99	87.344	ENSPCOG00000023011	SMARCA4	89	82.195	Propithecus_coquereli
ENSNBRG00000018865	-	76	72.687	ENSPVAG00000007787	SMARCA4	85	72.165	Pteropus_vampyrus
ENSNBRG00000018865	-	99	86.867	ENSPNYG00000000717	smarca4a	91	84.441	Pundamilia_nyererei
ENSNBRG00000018865	-	99	98.632	ENSPNYG00000023995	-	92	98.632	Pundamilia_nyererei
ENSNBRG00000018865	-	100	89.714	ENSPNAG00000006636	-	88	89.791	Pygocentrus_nattereri
ENSNBRG00000018865	-	99	86.010	ENSPNAG00000024136	smarca4a	89	85.877	Pygocentrus_nattereri
ENSNBRG00000018865	-	99	87.312	ENSRBIG00000038696	SMARCA4	88	82.296	Rhinopithecus_bieti
ENSNBRG00000018865	-	99	87.312	ENSRROG00000045509	SMARCA4	89	82.296	Rhinopithecus_roxellana
ENSNBRG00000018865	-	99	86.949	ENSSBOG00000026896	SMARCA4	89	82.296	Saimiri_boliviensis_boliviensis
ENSNBRG00000018865	-	99	85.633	ENSSHAG00000001642	SMARCA4	89	82.471	Sarcophilus_harrisii
ENSNBRG00000018865	-	99	88.770	ENSSFOG00015013823	smarca4	87	88.984	Scleropages_formosus
ENSNBRG00000018865	-	96	84.009	ENSSFOG00015009921	-	80	92.715	Scleropages_formosus
ENSNBRG00000018865	-	99	88.618	ENSSMAG00000014082	-	91	88.347	Scophthalmus_maximus
ENSNBRG00000018865	-	99	84.808	ENSSMAG00000003200	smarca4a	90	82.724	Scophthalmus_maximus
ENSNBRG00000018865	-	99	93.444	ENSSDUG00000005388	-	93	88.667	Seriola_dumerili
ENSNBRG00000018865	-	99	81.120	ENSSDUG00000017298	smarca4a	89	80.663	Seriola_dumerili
ENSNBRG00000018865	-	99	94.077	ENSSLDG00000023663	-	91	93.937	Seriola_lalandi_dorsalis
ENSNBRG00000018865	-	99	86.978	ENSSLDG00000024486	smarca4a	99	87.527	Seriola_lalandi_dorsalis
ENSNBRG00000018865	-	61	97.516	ENSSARG00000013477	SMARCA4	70	97.516	Sorex_araneus
ENSNBRG00000018865	-	99	86.141	ENSSPAG00000004248	smarca4a	89	86.762	Stegastes_partitus
ENSNBRG00000018865	-	99	96.987	ENSSPAG00000012533	-	89	96.987	Stegastes_partitus
ENSNBRG00000018865	-	60	84.534	ENSTGUG00000015488	-	98	84.304	Taeniopygia_guttata
ENSNBRG00000018865	-	99	82.456	ENSTRUG00000004885	smarca4a	99	83.310	Takifugu_rubripes
ENSNBRG00000018865	-	100	86.523	ENSTRUG00000001378	SMARCA4	92	86.523	Takifugu_rubripes
ENSNBRG00000018865	-	99	89.171	ENSTNIG00000004536	SMARCA4	90	89.759	Tetraodon_nigroviridis
ENSNBRG00000018865	-	78	82.857	ENSTNIG00000004859	-	83	90.456	Tetraodon_nigroviridis
ENSNBRG00000018865	-	100	84.846	ENSUMAG00000022005	SMARCA4	86	91.233	Ursus_maritimus
ENSNBRG00000018865	-	99	80.845	ENSXETG00000009355	smarca4	99	79.331	Xenopus_tropicalis
ENSNBRG00000018865	-	99	93.314	ENSXCOG00000013494	-	88	93.530	Xiphophorus_couchianus
ENSNBRG00000018865	-	99	94.468	ENSXMAG00000007030	-	89	94.109	Xiphophorus_maculatus
ENSNBRG00000018865	-	83	90.555	ENSXMAG00000006321	smarca4a	99	84.915	Xiphophorus_maculatus