EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019100 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6633 bases
Position: chrJH422361.1:864927-871559
Accession: 102778644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025138	ARS2	PF04959.13	1.9e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000025793	-	2592	XM_006802178	ENSNBRP00000025138	863 (aa)	XP_006802241	-

Gene Model

Click here to download ENSNBRG00000019100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019100	srrt	52	74.017	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSNBRG00000019100	srrt	95	89.536	ENSAPOG00000002304	srrt	98	89.120	Acanthochromis_polyacanthus
ENSNBRG00000019100	srrt	96	63.837	ENSAMEG00000014506	SRRT	51	74.670	Ailuropoda_melanoleuca
ENSNBRG00000019100	srrt	87	96.008	ENSACIG00000015795	srrt	94	95.824	Amphilophus_citrinellus
ENSNBRG00000019100	srrt	92	53.114	ENSAOCG00000009189	-	52	66.087	Amphiprion_ocellaris
ENSNBRG00000019100	srrt	95	89.631	ENSAOCG00000009693	srrt	98	89.211	Amphiprion_ocellaris
ENSNBRG00000019100	srrt	95	89.392	ENSAPEG00000003646	srrt	98	89.907	Amphiprion_percula
ENSNBRG00000019100	srrt	92	53.114	ENSAPEG00000020016	-	52	66.087	Amphiprion_percula
ENSNBRG00000019100	srrt	95	85.185	ENSATEG00000014425	srrt	90	90.749	Anabas_testudineus
ENSNBRG00000019100	srrt	54	60.285	ENSATEG00000003652	-	85	65.021	Anabas_testudineus
ENSNBRG00000019100	srrt	53	74.837	ENSACAG00000001014	SRRT	52	75.604	Anolis_carolinensis
ENSNBRG00000019100	srrt	52	72.903	ENSANAG00000031718	SRRT	53	72.903	Aotus_nancymaae
ENSNBRG00000019100	srrt	100	96.697	ENSACLG00000013156	srrt	96	96.697	Astatotilapia_calliptera
ENSNBRG00000019100	srrt	52	64.516	ENSACLG00000009423	-	52	65.152	Astatotilapia_calliptera
ENSNBRG00000019100	srrt	52	72.903	ENSBTAG00000001134	SRRT	53	72.903	Bos_taurus
ENSNBRG00000019100	srrt	73	42.922	WBGene00017085	E01A2.2	88	40.994	Caenorhabditis_elegans
ENSNBRG00000019100	srrt	52	72.688	ENSCJAG00000014917	SRRT	53	72.688	Callithrix_jacchus
ENSNBRG00000019100	srrt	96	62.558	ENSCAFG00000023538	SRRT	53	72.903	Canis_familiaris
ENSNBRG00000019100	srrt	98	62.630	ENSCAFG00020013358	SRRT	52	75.556	Canis_lupus_dingo
ENSNBRG00000019100	srrt	84	73.319	ENSCHIG00000010495	SRRT	79	73.319	Capra_hircus
ENSNBRG00000019100	srrt	95	61.810	ENSTSYG00000036426	SRRT	56	73.753	Carlito_syrichta
ENSNBRG00000019100	srrt	95	63.227	ENSCAPG00000013586	SRRT	89	69.133	Cavia_aperea
ENSNBRG00000019100	srrt	52	72.318	ENSCPOG00000001739	SRRT	53	72.318	Cavia_porcellus
ENSNBRG00000019100	srrt	52	72.903	ENSCCAG00000015877	SRRT	53	72.903	Cebus_capucinus
ENSNBRG00000019100	srrt	52	73.536	ENSCATG00000036306	SRRT	53	73.536	Cercocebus_atys
ENSNBRG00000019100	srrt	52	72.688	ENSCLAG00000007568	SRRT	89	69.742	Chinchilla_lanigera
ENSNBRG00000019100	srrt	52	72.903	ENSCSAG00000017996	SRRT	53	72.903	Chlorocebus_sabaeus
ENSNBRG00000019100	srrt	51	73.333	ENSCHOG00000007815	SRRT	63	71.329	Choloepus_hoffmanni
ENSNBRG00000019100	srrt	70	72.807	ENSCPBG00000011553	SRRT	85	66.901	Chrysemys_picta_bellii
ENSNBRG00000019100	srrt	100	41.311	ENSCING00000003506	-	54	49.580	Ciona_intestinalis
ENSNBRG00000019100	srrt	100	41.556	ENSCSAVG00000008394	-	81	55.556	Ciona_savignyi
ENSNBRG00000019100	srrt	52	73.536	ENSCANG00000034556	SRRT	53	73.536	Colobus_angolensis_palliatus
ENSNBRG00000019100	srrt	52	73.118	ENSCGRG00001001594	Srrt	53	73.118	Cricetulus_griseus_chok1gshd
ENSNBRG00000019100	srrt	70	74.839	ENSCGRG00000007292	Srrt	89	70.172	Cricetulus_griseus_crigri
ENSNBRG00000019100	srrt	98	74.625	ENSCSEG00000017878	srrt	50	81.938	Cynoglossus_semilaevis
ENSNBRG00000019100	srrt	92	54.156	ENSCSEG00000005233	-	54	65.502	Cynoglossus_semilaevis
ENSNBRG00000019100	srrt	90	54.037	ENSCVAG00000017344	-	52	64.368	Cyprinodon_variegatus
ENSNBRG00000019100	srrt	95	87.097	ENSCVAG00000019848	srrt	98	85.930	Cyprinodon_variegatus
ENSNBRG00000019100	srrt	95	75.469	ENSDARG00000017762	srrt	51	84.581	Danio_rerio
ENSNBRG00000019100	srrt	52	72.903	ENSDNOG00000003851	SRRT	53	72.903	Dasypus_novemcinctus
ENSNBRG00000019100	srrt	52	73.319	ENSDORG00000005584	Srrt	89	70.563	Dipodomys_ordii
ENSNBRG00000019100	srrt	83	52.258	FBgn0033062	Ars2	59	52.331	Drosophila_melanogaster
ENSNBRG00000019100	srrt	74	71.036	ENSETEG00000016175	SRRT	71	71.036	Echinops_telfairi
ENSNBRG00000019100	srrt	62	61.653	ENSEBUG00000008517	-	77	62.069	Eptatretus_burgeri
ENSNBRG00000019100	srrt	52	72.903	ENSEASG00005016956	SRRT	53	72.903	Equus_asinus_asinus
ENSNBRG00000019100	srrt	52	72.903	ENSECAG00000012292	SRRT	53	72.903	Equus_caballus
ENSNBRG00000019100	srrt	80	73.469	ENSEEUG00000009117	SRRT	57	79.730	Erinaceus_europaeus
ENSNBRG00000019100	srrt	92	59.075	ENSELUG00000021216	-	53	67.521	Esox_lucius
ENSNBRG00000019100	srrt	95	73.963	ENSELUG00000006651	srrt	50	83.772	Esox_lucius
ENSNBRG00000019100	srrt	52	73.118	ENSFCAG00000006855	SRRT	53	73.118	Felis_catus
ENSNBRG00000019100	srrt	52	70.889	ENSFDAG00000021347	SRRT	88	68.374	Fukomys_damarensis
ENSNBRG00000019100	srrt	52	57.143	ENSFHEG00000004105	-	93	56.780	Fundulus_heteroclitus
ENSNBRG00000019100	srrt	75	89.683	ENSFHEG00000002756	srrt	91	89.818	Fundulus_heteroclitus
ENSNBRG00000019100	srrt	95	73.540	ENSGMOG00000018619	srrt	98	74.216	Gadus_morhua
ENSNBRG00000019100	srrt	95	86.022	ENSGAFG00000005423	srrt	98	85.698	Gambusia_affinis
ENSNBRG00000019100	srrt	92	52.741	ENSGAFG00000020383	-	54	62.690	Gambusia_affinis
ENSNBRG00000019100	srrt	92	54.286	ENSGACG00000001100	-	52	63.362	Gasterosteus_aculeatus
ENSNBRG00000019100	srrt	95	84.397	ENSGACG00000020387	srrt	98	85.450	Gasterosteus_aculeatus
ENSNBRG00000019100	srrt	52	73.536	ENSGGOG00000001508	SRRT	60	68.508	Gorilla_gorilla
ENSNBRG00000019100	srrt	100	97.039	ENSHBUG00000002942	srrt	96	97.039	Haplochromis_burtoni
ENSNBRG00000019100	srrt	96	62.761	ENSHGLG00000008344	Srrt	89	69.528	Heterocephalus_glaber_female
ENSNBRG00000019100	srrt	96	63.201	ENSHGLG00100018857	Srrt	89	70.652	Heterocephalus_glaber_male
ENSNBRG00000019100	srrt	98	81.564	ENSHCOG00000005403	srrt	98	79.907	Hippocampus_comes
ENSNBRG00000019100	srrt	92	54.803	ENSHCOG00000008904	-	86	63.636	Hippocampus_comes
ENSNBRG00000019100	srrt	92	74.002	ENSIPUG00000021150	srrt	51	81.938	Ictalurus_punctatus
ENSNBRG00000019100	srrt	52	73.536	ENSSTOG00000013776	SRRT	53	73.536	Ictidomys_tridecemlineatus
ENSNBRG00000019100	srrt	96	63.948	ENSJJAG00000010446	Srrt	89	71.087	Jaculus_jaculus
ENSNBRG00000019100	srrt	95	84.561	ENSKMAG00000013599	srrt	55	90.308	Kryptolebias_marmoratus
ENSNBRG00000019100	srrt	52	64.226	ENSKMAG00000008468	-	53	63.713	Kryptolebias_marmoratus
ENSNBRG00000019100	srrt	98	79.698	ENSLBEG00000016308	srrt	55	90.618	Labrus_bergylta
ENSNBRG00000019100	srrt	95	54.019	ENSLACG00000001089	SRRT	53	56.739	Latimeria_chalumnae
ENSNBRG00000019100	srrt	90	59.394	ENSLOCG00000013658	srrt	73	82.278	Lepisosteus_oculatus
ENSNBRG00000019100	srrt	52	73.118	ENSLAFG00000007725	SRRT	53	73.118	Loxodonta_africana
ENSNBRG00000019100	srrt	52	73.536	ENSMFAG00000033745	SRRT	56	71.670	Macaca_fascicularis
ENSNBRG00000019100	srrt	52	72.903	ENSMMUG00000021255	SRRT	53	72.903	Macaca_mulatta
ENSNBRG00000019100	srrt	52	72.903	ENSMNEG00000041864	SRRT	53	72.903	Macaca_nemestrina
ENSNBRG00000019100	srrt	52	73.536	ENSMLEG00000029479	SRRT	55	71.670	Mandrillus_leucophaeus
ENSNBRG00000019100	srrt	95	86.228	ENSMAMG00000014311	srrt	98	87.179	Mastacembelus_armatus
ENSNBRG00000019100	srrt	52	65.376	ENSMAMG00000010681	-	52	66.017	Mastacembelus_armatus
ENSNBRG00000019100	srrt	52	64.731	ENSMZEG00005028002	-	52	65.368	Maylandia_zebra
ENSNBRG00000019100	srrt	100	96.811	ENSMZEG00005016135	srrt	96	96.811	Maylandia_zebra
ENSNBRG00000019100	srrt	52	72.688	ENSMAUG00000011386	Srrt	89	69.723	Mesocricetus_auratus
ENSNBRG00000019100	srrt	52	72.903	ENSMICG00000009471	SRRT	55	71.670	Microcebus_murinus
ENSNBRG00000019100	srrt	52	72.903	ENSMOCG00000001971	Srrt	89	70.474	Microtus_ochrogaster
ENSNBRG00000019100	srrt	83	56.797	ENSMMOG00000011137	-	55	66.958	Mola_mola
ENSNBRG00000019100	srrt	52	69.165	ENSMODG00000004862	SRRT	89	70.021	Monodelphis_domestica
ENSNBRG00000019100	srrt	59	49.903	ENSMALG00000005567	-	84	54.222	Monopterus_albus
ENSNBRG00000019100	srrt	90	80.326	ENSMALG00000018604	srrt	54	86.726	Monopterus_albus
ENSNBRG00000019100	srrt	96	64.066	MGP_CAROLIEiJ_G0027870	Srrt	99	70.412	Mus_caroli
ENSNBRG00000019100	srrt	96	64.066	ENSMUSG00000037364	Srrt	99	70.412	Mus_musculus
ENSNBRG00000019100	srrt	52	74.670	MGP_PahariEiJ_G0024456	Srrt	99	70.412	Mus_pahari
ENSNBRG00000019100	srrt	96	64.066	MGP_SPRETEiJ_G0028875	Srrt	99	70.412	Mus_spretus
ENSNBRG00000019100	srrt	96	62.384	ENSMPUG00000015839	SRRT	53	72.903	Mustela_putorius_furo
ENSNBRG00000019100	srrt	52	72.688	ENSMLUG00000009975	SRRT	53	72.688	Myotis_lucifugus
ENSNBRG00000019100	srrt	52	72.903	ENSNGAG00000023715	Srrt	64	72.903	Nannospalax_galili
ENSNBRG00000019100	srrt	83	64.238	ENSNLEG00000011987	SRRT	90	63.537	Nomascus_leucogenys
ENSNBRG00000019100	srrt	96	54.186	ENSMEUG00000011941	SRRT	52	60.907	Notamacropus_eugenii
ENSNBRG00000019100	srrt	61	71.212	ENSOPRG00000002502	-	67	71.970	Ochotona_princeps
ENSNBRG00000019100	srrt	96	63.486	ENSODEG00000016856	SRRT	89	70.435	Octodon_degus
ENSNBRG00000019100	srrt	100	96.587	ENSONIG00000004242	srrt	100	93.556	Oreochromis_niloticus
ENSNBRG00000019100	srrt	92	54.621	ENSONIG00000016080	-	52	65.376	Oreochromis_niloticus
ENSNBRG00000019100	srrt	98	84.400	ENSORLG00000008120	srrt	52	90.308	Oryzias_latipes
ENSNBRG00000019100	srrt	98	84.400	ENSORLG00020003058	srrt	52	90.529	Oryzias_latipes_hni
ENSNBRG00000019100	srrt	98	84.284	ENSORLG00015008062	srrt	52	90.529	Oryzias_latipes_hsok
ENSNBRG00000019100	srrt	98	84.767	ENSOMEG00000003155	srrt	92	90.308	Oryzias_melastigma
ENSNBRG00000019100	srrt	92	58.384	ENSOMEG00000006963	-	53	66.522	Oryzias_melastigma
ENSNBRG00000019100	srrt	52	72.903	ENSOGAG00000017242	SRRT	53	72.903	Otolemur_garnettii
ENSNBRG00000019100	srrt	52	73.536	ENSOARG00000015645	SRRT	53	73.536	Ovis_aries
ENSNBRG00000019100	srrt	52	73.536	ENSPPAG00000041090	SRRT	53	73.536	Pan_paniscus
ENSNBRG00000019100	srrt	52	73.536	ENSPPRG00000009557	SRRT	53	73.319	Panthera_pardus
ENSNBRG00000019100	srrt	52	73.118	ENSPTIG00000014355	SRRT	53	73.118	Panthera_tigris_altaica
ENSNBRG00000019100	srrt	52	73.536	ENSPTRG00000019511	SRRT	53	73.536	Pan_troglodytes
ENSNBRG00000019100	srrt	52	71.670	ENSPANG00000020763	SRRT	54	71.670	Papio_anubis
ENSNBRG00000019100	srrt	98	70.081	ENSPKIG00000005434	srrt	54	79.783	Paramormyrops_kingsleyae
ENSNBRG00000019100	srrt	52	74.558	ENSPSIG00000016311	SRRT	52	74.558	Pelodiscus_sinensis
ENSNBRG00000019100	srrt	52	74.670	ENSPEMG00000010834	Srrt	89	70.652	Peromyscus_maniculatus_bairdii
ENSNBRG00000019100	srrt	96	62.674	ENSPCIG00000000816	SRRT	53	71.459	Phascolarctos_cinereus
ENSNBRG00000019100	srrt	92	53.137	ENSPFOG00000016554	-	54	62.554	Poecilia_formosa
ENSNBRG00000019100	srrt	95	86.038	ENSPFOG00000005704	srrt	98	85.714	Poecilia_formosa
ENSNBRG00000019100	srrt	92	53.374	ENSPLAG00000004526	-	55	62.419	Poecilia_latipinna
ENSNBRG00000019100	srrt	95	85.800	ENSPMEG00000001182	srrt	98	85.482	Poecilia_mexicana
ENSNBRG00000019100	srrt	88	52.789	ENSPMEG00000001520	-	51	62.945	Poecilia_mexicana
ENSNBRG00000019100	srrt	95	85.680	ENSPREG00000022308	srrt	98	85.366	Poecilia_reticulata
ENSNBRG00000019100	srrt	52	71.247	ENSPCAG00000001621	SRRT	53	71.247	Procavia_capensis
ENSNBRG00000019100	srrt	52	73.536	ENSPCOG00000025751	SRRT	53	73.536	Propithecus_coquereli
ENSNBRG00000019100	srrt	67	65.161	ENSPVAG00000000834	SRRT	88	65.161	Pteropus_vampyrus
ENSNBRG00000019100	srrt	100	97.153	ENSPNYG00000018710	srrt	100	97.153	Pundamilia_nyererei
ENSNBRG00000019100	srrt	74	90.385	ENSPNAG00000010629	srrt	80	68.584	Pygocentrus_nattereri
ENSNBRG00000019100	srrt	52	64.333	ENSRNOG00000048277	AABR07035787.1	92	64.333	Rattus_norvegicus
ENSNBRG00000019100	srrt	52	72.903	ENSRBIG00000035718	SRRT	66	67.582	Rhinopithecus_bieti
ENSNBRG00000019100	srrt	52	72.903	ENSRROG00000030622	SRRT	66	67.582	Rhinopithecus_roxellana
ENSNBRG00000019100	srrt	52	73.536	ENSSBOG00000033570	SRRT	53	73.536	Saimiri_boliviensis_boliviensis
ENSNBRG00000019100	srrt	71	62.031	ENSSHAG00000007349	-	74	71.368	Sarcophilus_harrisii
ENSNBRG00000019100	srrt	52	61.734	ENSSMAG00000018195	-	57	63.283	Scophthalmus_maximus
ENSNBRG00000019100	srrt	95	88.263	ENSSMAG00000015342	srrt	98	88.215	Scophthalmus_maximus
ENSNBRG00000019100	srrt	52	55.224	ENSSDUG00000002051	-	93	55.150	Seriola_dumerili
ENSNBRG00000019100	srrt	95	88.650	ENSSDUG00000012049	srrt	93	88.953	Seriola_dumerili
ENSNBRG00000019100	srrt	83	91.729	ENSSLDG00000017477	srrt	88	91.696	Seriola_lalandi_dorsalis
ENSNBRG00000019100	srrt	95	89.074	ENSSPAG00000005665	srrt	96	89.249	Stegastes_partitus
ENSNBRG00000019100	srrt	52	57.424	ENSSPAG00000018943	-	93	57.952	Stegastes_partitus
ENSNBRG00000019100	srrt	50	72.172	ENSSSCG00000024789	SRRT	54	72.172	Sus_scrofa
ENSNBRG00000019100	srrt	74	72.156	ENSTNIG00000011779	srrt	73	86.538	Tetraodon_nigroviridis
ENSNBRG00000019100	srrt	92	53.593	ENSTNIG00000003111	-	53	63.557	Tetraodon_nigroviridis
ENSNBRG00000019100	srrt	61	73.913	ENSTBEG00000005212	SRRT	59	73.913	Tupaia_belangeri
ENSNBRG00000019100	srrt	52	72.903	ENSTTRG00000011104	SRRT	53	72.903	Tursiops_truncatus
ENSNBRG00000019100	srrt	95	62.500	ENSUAMG00000027997	SRRT	55	72.903	Ursus_americanus
ENSNBRG00000019100	srrt	96	62.485	ENSUMAG00000011295	SRRT	53	72.903	Ursus_maritimus
ENSNBRG00000019100	srrt	96	62.558	ENSVVUG00000023572	SRRT	53	72.903	Vulpes_vulpes
ENSNBRG00000019100	srrt	73	73.333	ENSXETG00000025124	srrt	74	75.000	Xenopus_tropicalis
ENSNBRG00000019100	srrt	54	51.915	ENSXCOG00000013105	-	91	53.084	Xiphophorus_couchianus
ENSNBRG00000019100	srrt	98	85.930	ENSXMAG00000007627	srrt	98	85.349	Xiphophorus_maculatus
ENSNBRG00000019100	srrt	92	52.805	ENSXMAG00000002090	-	54	63.124	Xiphophorus_maculatus