EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000019189 (Gene tree)
Gene ID: 102778554
Gene Symbol: sbno1
Alias: -
Full Name: protein strawberry notch homolog 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 11853 bases
Position: chrJH422402.1:578005-589857
Accession: 102778554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025182	ResIII	PF04851.15	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000025837	-	3972	XM_006804717	ENSNBRP00000025182	1323 (aa)	XP_006804780	-

Gene Model

Click here to download ENSNBRG00000019189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000019189	sbno1	73	62.500	ENSNBRG00000022968	si:ch73-63e15.2	88	63.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019189	sbno1	99	74.465	ENSG00000139697	SBNO1	99	74.374	Homo_sapiens
ENSNBRG00000019189	sbno1	85	92.382	ENSAPOG00000003196	sbno1	98	93.257	Acanthochromis_polyacanthus
ENSNBRG00000019189	sbno1	99	74.253	ENSAMEG00000015151	SBNO1	99	73.519	Ailuropoda_melanoleuca
ENSNBRG00000019189	sbno1	100	91.189	ENSACIG00000008088	sbno1	99	91.263	Amphilophus_citrinellus
ENSNBRG00000019189	sbno1	100	88.066	ENSAOCG00000014859	sbno1	99	89.145	Amphiprion_ocellaris
ENSNBRG00000019189	sbno1	100	87.994	ENSAPEG00000006069	sbno1	99	89.073	Amphiprion_percula
ENSNBRG00000019189	sbno1	100	87.687	ENSATEG00000006667	sbno1	100	88.043	Anabas_testudineus
ENSNBRG00000019189	sbno1	98	74.819	ENSAPLG00000015674	SBNO1	99	74.839	Anas_platyrhynchos
ENSNBRG00000019189	sbno1	98	75.704	ENSACAG00000015441	SBNO1	88	75.164	Anolis_carolinensis
ENSNBRG00000019189	sbno1	99	76.372	ENSANAG00000029958	-	99	76.211	Aotus_nancymaae
ENSNBRG00000019189	sbno1	100	95.526	ENSACLG00000024913	sbno1	100	95.526	Astatotilapia_calliptera
ENSNBRG00000019189	sbno1	100	78.040	ENSAMXG00000019473	sbno1	100	78.112	Astyanax_mexicanus
ENSNBRG00000019189	sbno1	100	76.093	ENSBTAG00000020505	SBNO1	99	76.298	Bos_taurus
ENSNBRG00000019189	sbno1	99	74.412	ENSCJAG00000016599	SBNO1	99	74.320	Callithrix_jacchus
ENSNBRG00000019189	sbno1	99	74.306	ENSCAFG00000007503	SBNO1	99	77.006	Canis_familiaris
ENSNBRG00000019189	sbno1	99	75.128	ENSCAFG00020015363	SBNO1	99	77.917	Canis_lupus_dingo
ENSNBRG00000019189	sbno1	100	74.467	ENSCHIG00000008382	SBNO1	99	74.518	Capra_hircus
ENSNBRG00000019189	sbno1	99	76.152	ENSTSYG00000012749	SBNO1	99	76.285	Carlito_syrichta
ENSNBRG00000019189	sbno1	97	77.069	ENSCAPG00000000384	SBNO1	98	77.005	Cavia_aperea
ENSNBRG00000019189	sbno1	99	74.427	ENSCPOG00000008109	SBNO1	99	74.228	Cavia_porcellus
ENSNBRG00000019189	sbno1	99	71.836	ENSCCAG00000035316	SBNO1	99	71.753	Cebus_capucinus
ENSNBRG00000019189	sbno1	97	77.156	ENSCATG00000008239	SBNO1	97	77.099	Cercocebus_atys
ENSNBRG00000019189	sbno1	99	74.230	ENSCLAG00000008995	SBNO1	99	74.050	Chinchilla_lanigera
ENSNBRG00000019189	sbno1	85	80.601	ENSCSAG00000002064	SBNO1	99	80.517	Chlorocebus_sabaeus
ENSNBRG00000019189	sbno1	95	71.483	ENSCHOG00000008814	SBNO1	96	71.538	Choloepus_hoffmanni
ENSNBRG00000019189	sbno1	98	76.173	ENSCPBG00000025968	SBNO1	98	75.257	Chrysemys_picta_bellii
ENSNBRG00000019189	sbno1	99	70.991	ENSCANG00000042688	-	99	70.529	Colobus_angolensis_palliatus
ENSNBRG00000019189	sbno1	100	73.950	ENSCGRG00001017470	Sbno1	99	73.857	Cricetulus_griseus_chok1gshd
ENSNBRG00000019189	sbno1	100	73.950	ENSCGRG00000004756	Sbno1	99	73.857	Cricetulus_griseus_crigri
ENSNBRG00000019189	sbno1	100	85.082	ENSCSEG00000011919	sbno1	100	85.296	Cynoglossus_semilaevis
ENSNBRG00000019189	sbno1	100	85.725	ENSCVAG00000007038	sbno1	100	85.237	Cyprinodon_variegatus
ENSNBRG00000019189	sbno1	100	78.951	ENSDARG00000099080	sbno1	100	79.023	Danio_rerio
ENSNBRG00000019189	sbno1	99	74.476	ENSDNOG00000017147	SBNO1	96	74.476	Dasypus_novemcinctus
ENSNBRG00000019189	sbno1	99	69.220	ENSDORG00000015261	Sbno1	99	69.180	Dipodomys_ordii
ENSNBRG00000019189	sbno1	92	71.429	ENSETEG00000005620	SBNO1	93	71.429	Echinops_telfairi
ENSNBRG00000019189	sbno1	73	63.096	ENSEBUG00000013823	sbno1	93	62.271	Eptatretus_burgeri
ENSNBRG00000019189	sbno1	50	77.434	ENSEASG00005012595	-	92	77.434	Equus_asinus_asinus
ENSNBRG00000019189	sbno1	97	77.080	ENSECAG00000006127	SBNO1	99	74.464	Equus_caballus
ENSNBRG00000019189	sbno1	83	77.049	ENSEEUG00000003793	SBNO1	77	77.049	Erinaceus_europaeus
ENSNBRG00000019189	sbno1	100	78.078	ENSELUG00000002886	sbno1	99	78.734	Esox_lucius
ENSNBRG00000019189	sbno1	99	74.483	ENSFCAG00000015331	SBNO1	99	74.320	Felis_catus
ENSNBRG00000019189	sbno1	98	74.673	ENSFALG00000009273	SBNO1	99	74.911	Ficedula_albicollis
ENSNBRG00000019189	sbno1	100	73.500	ENSFDAG00000014232	SBNO1	99	73.357	Fukomys_damarensis
ENSNBRG00000019189	sbno1	100	85.943	ENSFHEG00000007360	sbno1	100	85.652	Fundulus_heteroclitus
ENSNBRG00000019189	sbno1	97	83.639	ENSGMOG00000018229	sbno1	99	84.012	Gadus_morhua
ENSNBRG00000019189	sbno1	88	74.376	ENSGALG00000003392	SBNO1	99	74.919	Gallus_gallus
ENSNBRG00000019189	sbno1	100	88.422	ENSGAFG00000003960	sbno1	99	88.274	Gambusia_affinis
ENSNBRG00000019189	sbno1	97	88.226	ENSGACG00000015633	sbno1	99	88.326	Gasterosteus_aculeatus
ENSNBRG00000019189	sbno1	98	75.841	ENSGAGG00000001065	SBNO1	99	75.000	Gopherus_agassizii
ENSNBRG00000019189	sbno1	99	76.298	ENSGGOG00000015000	SBNO1	99	76.138	Gorilla_gorilla
ENSNBRG00000019189	sbno1	100	88.467	ENSHBUG00000011910	sbno1	100	88.427	Haplochromis_burtoni
ENSNBRG00000019189	sbno1	99	74.284	ENSHGLG00000014165	-	99	73.816	Heterocephalus_glaber_female
ENSNBRG00000019189	sbno1	91	89.307	ENSHCOG00000003246	sbno1	95	89.307	Hippocampus_comes
ENSNBRG00000019189	sbno1	100	78.112	ENSIPUG00000015830	Sbno1	98	78.398	Ictalurus_punctatus
ENSNBRG00000019189	sbno1	99	76.518	ENSSTOG00000023221	SBNO1	99	76.432	Ictidomys_tridecemlineatus
ENSNBRG00000019189	sbno1	99	74.056	ENSJJAG00000001741	Sbno1	99	74.034	Jaculus_jaculus
ENSNBRG00000019189	sbno1	100	88.015	ENSKMAG00000009696	sbno1	100	87.941	Kryptolebias_marmoratus
ENSNBRG00000019189	sbno1	100	84.943	ENSLBEG00000007623	sbno1	100	85.724	Labrus_bergylta
ENSNBRG00000019189	sbno1	100	70.450	ENSLACG00000017227	SBNO1	99	72.816	Latimeria_chalumnae
ENSNBRG00000019189	sbno1	100	78.669	ENSLOCG00000005725	sbno1	97	78.351	Lepisosteus_oculatus
ENSNBRG00000019189	sbno1	99	73.628	ENSLAFG00000002135	SBNO1	99	73.944	Loxodonta_africana
ENSNBRG00000019189	sbno1	99	75.237	ENSMFAG00000031429	SBNO1	99	75.000	Macaca_fascicularis
ENSNBRG00000019189	sbno1	99	75.237	ENSMMUG00000011496	SBNO1	99	75.000	Macaca_mulatta
ENSNBRG00000019189	sbno1	99	75.915	ENSMLEG00000033260	SBNO1	99	75.753	Mandrillus_leucophaeus
ENSNBRG00000019189	sbno1	100	87.393	ENSMAMG00000005473	sbno1	100	87.179	Mastacembelus_armatus
ENSNBRG00000019189	sbno1	98	74.927	ENSMGAG00000003274	SBNO1	99	75.089	Meleagris_gallopavo
ENSNBRG00000019189	sbno1	99	75.791	ENSMICG00000006573	-	99	75.849	Microcebus_murinus
ENSNBRG00000019189	sbno1	100	72.350	ENSMOCG00000009390	Sbno1	99	72.506	Microtus_ochrogaster
ENSNBRG00000019189	sbno1	100	85.163	ENSMMOG00000008691	sbno1	99	85.757	Mola_mola
ENSNBRG00000019189	sbno1	99	73.932	ENSMODG00000012470	SBNO1	98	73.873	Monodelphis_domestica
ENSNBRG00000019189	sbno1	100	87.371	ENSMALG00000001056	sbno1	100	87.740	Monopterus_albus
ENSNBRG00000019189	sbno1	99	74.390	MGP_CAROLIEiJ_G0027749	Sbno1	95	90.351	Mus_caroli
ENSNBRG00000019189	sbno1	99	74.499	ENSMUSG00000038095	Sbno1	94	90.351	Mus_musculus
ENSNBRG00000019189	sbno1	99	74.874	MGP_PahariEiJ_G0024329	Sbno1	95	90.351	Mus_pahari
ENSNBRG00000019189	sbno1	99	74.390	MGP_SPRETEiJ_G0028747	Sbno1	95	90.351	Mus_spretus
ENSNBRG00000019189	sbno1	99	74.483	ENSMPUG00000001658	SBNO1	99	74.320	Mustela_putorius_furo
ENSNBRG00000019189	sbno1	99	74.445	ENSMLUG00000017159	SBNO1	99	74.087	Myotis_lucifugus
ENSNBRG00000019189	sbno1	99	74.412	ENSNGAG00000012620	Sbno1	99	73.963	Nannospalax_galili
ENSNBRG00000019189	sbno1	99	73.372	ENSNLEG00000001502	SBNO1	99	73.128	Nomascus_leucogenys
ENSNBRG00000019189	sbno1	61	69.935	ENSMEUG00000008768	-	90	74.046	Notamacropus_eugenii
ENSNBRG00000019189	sbno1	99	73.500	ENSOPRG00000011054	SBNO1	99	73.944	Ochotona_princeps
ENSNBRG00000019189	sbno1	99	74.857	ENSODEG00000009997	SBNO1	99	74.517	Octodon_degus
ENSNBRG00000019189	sbno1	100	93.728	ENSONIG00000015348	sbno1	100	93.728	Oreochromis_niloticus
ENSNBRG00000019189	sbno1	100	72.617	ENSOCUG00000002441	SBNO1	96	72.448	Oryctolagus_cuniculus
ENSNBRG00000019189	sbno1	100	84.259	ENSORLG00000001593	sbno1	100	84.117	Oryzias_latipes
ENSNBRG00000019189	sbno1	100	84.391	ENSORLG00020015216	sbno1	100	84.319	Oryzias_latipes_hni
ENSNBRG00000019189	sbno1	100	84.462	ENSORLG00015002726	sbno1	100	84.391	Oryzias_latipes_hsok
ENSNBRG00000019189	sbno1	99	85.806	ENSOMEG00000019313	sbno1	99	85.438	Oryzias_melastigma
ENSNBRG00000019189	sbno1	100	74.290	ENSOARG00000004404	SBNO1	99	74.341	Ovis_aries
ENSNBRG00000019189	sbno1	99	76.298	ENSPPAG00000024635	SBNO1	99	76.138	Pan_paniscus
ENSNBRG00000019189	sbno1	99	74.483	ENSPPRG00000022092	SBNO1	99	74.320	Panthera_pardus
ENSNBRG00000019189	sbno1	99	74.571	ENSPTIG00000017803	SBNO1	99	74.480	Panthera_tigris_altaica
ENSNBRG00000019189	sbno1	99	76.298	ENSPTRG00000005597	SBNO1	99	76.138	Pan_troglodytes
ENSNBRG00000019189	sbno1	99	76.518	ENSPANG00000011640	SBNO1	99	76.211	Papio_anubis
ENSNBRG00000019189	sbno1	100	77.459	ENSPKIG00000001441	sbno1	100	77.260	Paramormyrops_kingsleyae
ENSNBRG00000019189	sbno1	92	70.779	ENSPSIG00000009256	-	99	70.465	Pelodiscus_sinensis
ENSNBRG00000019189	sbno1	98	76.212	ENSPSIG00000009572	-	99	75.147	Pelodiscus_sinensis
ENSNBRG00000019189	sbno1	100	73.703	ENSPEMG00000016087	Sbno1	99	73.643	Peromyscus_maniculatus_bairdii
ENSNBRG00000019189	sbno1	99	75.971	ENSPCIG00000010985	SBNO1	99	75.604	Phascolarctos_cinereus
ENSNBRG00000019189	sbno1	100	86.396	ENSPFOG00000005069	sbno1	100	86.325	Poecilia_formosa
ENSNBRG00000019189	sbno1	100	86.396	ENSPLAG00000015015	sbno1	100	86.325	Poecilia_latipinna
ENSNBRG00000019189	sbno1	100	86.335	ENSPMEG00000021212	sbno1	100	86.263	Poecilia_mexicana
ENSNBRG00000019189	sbno1	100	85.552	ENSPREG00000017746	sbno1	100	85.480	Poecilia_reticulata
ENSNBRG00000019189	sbno1	99	74.713	ENSPPYG00000005084	SBNO1	99	74.284	Pongo_abelii
ENSNBRG00000019189	sbno1	88	69.074	ENSPCAG00000008634	SBNO1	88	68.169	Procavia_capensis
ENSNBRG00000019189	sbno1	99	75.842	ENSPCOG00000024277	SBNO1	99	75.753	Propithecus_coquereli
ENSNBRG00000019189	sbno1	86	80.800	ENSPVAG00000015304	SBNO1	87	80.800	Pteropus_vampyrus
ENSNBRG00000019189	sbno1	100	94.076	ENSPNYG00000004291	sbno1	100	94.076	Pundamilia_nyererei
ENSNBRG00000019189	sbno1	100	78.429	ENSPNAG00000015622	sbno1	100	78.500	Pygocentrus_nattereri
ENSNBRG00000019189	sbno1	99	73.947	ENSRNOG00000001064	Sbno1	99	73.926	Rattus_norvegicus
ENSNBRG00000019189	sbno1	99	76.445	ENSRROG00000034230	SBNO1	99	76.285	Rhinopithecus_roxellana
ENSNBRG00000019189	sbno1	97	73.959	ENSSBOG00000015422	SBNO1	97	73.873	Saimiri_boliviensis_boliviensis
ENSNBRG00000019189	sbno1	100	80.103	ENSSFOG00015019025	sbno1	100	79.971	Scleropages_formosus
ENSNBRG00000019189	sbno1	100	87.564	ENSSMAG00000013640	sbno1	100	87.491	Scophthalmus_maximus
ENSNBRG00000019189	sbno1	100	87.972	ENSSDUG00000023480	sbno1	100	88.541	Seriola_dumerili
ENSNBRG00000019189	sbno1	100	87.758	ENSSLDG00000007928	sbno1	100	88.327	Seriola_lalandi_dorsalis
ENSNBRG00000019189	sbno1	87	78.824	ENSSARG00000002594	SBNO1	87	79.160	Sorex_araneus
ENSNBRG00000019189	sbno1	98	76.431	ENSSPUG00000012640	SBNO1	99	76.397	Sphenodon_punctatus
ENSNBRG00000019189	sbno1	100	87.846	ENSSPAG00000016244	sbno1	100	88.486	Stegastes_partitus
ENSNBRG00000019189	sbno1	99	76.096	ENSSSCG00000009776	SBNO1	99	76.229	Sus_scrofa
ENSNBRG00000019189	sbno1	98	74.528	ENSTGUG00000005380	SBNO1	99	74.768	Taeniopygia_guttata
ENSNBRG00000019189	sbno1	99	85.204	ENSTRUG00000018490	sbno1	99	85.130	Takifugu_rubripes
ENSNBRG00000019189	sbno1	56	78.598	ENSTNIG00000013506	sbno1	99	80.227	Tetraodon_nigroviridis
ENSNBRG00000019189	sbno1	99	74.483	ENSUAMG00000019671	SBNO1	99	73.748	Ursus_americanus
ENSNBRG00000019189	sbno1	99	74.483	ENSUMAG00000004002	SBNO1	99	73.748	Ursus_maritimus
ENSNBRG00000019189	sbno1	95	76.190	ENSVPAG00000007024	SBNO1	95	76.190	Vicugna_pacos
ENSNBRG00000019189	sbno1	99	74.412	ENSVVUG00000027807	SBNO1	99	74.249	Vulpes_vulpes
ENSNBRG00000019189	sbno1	99	72.727	ENSXETG00000031930	SBNO1	99	71.868	Xenopus_tropicalis
ENSNBRG00000019189	sbno1	88	83.952	ENSXCOG00000011607	sbno1	99	82.067	Xiphophorus_couchianus
ENSNBRG00000019189	sbno1	100	87.261	ENSXMAG00000002140	sbno1	99	87.555	Xiphophorus_maculatus