EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019358 (Gene tree)
Gene ID: 102784079
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 23601 bases
Position: chrJH422313.1:3986448-4010048
Accession: 102784079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025432	Not1	PF04054.15	3.4e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026098	-	6462	XM_006795859	ENSNBRP00000025432	2153 (aa)	XP_006795922	-

Gene Model

Click here to download ENSNBRG00000019358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019358	cnot1	100	97.055	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSNBRG00000019358	cnot1	100	95.958	ENSAPOG00000005042	cnot1	97	95.958	Acanthochromis_polyacanthus
ENSNBRG00000019358	cnot1	100	97.055	ENSAMEG00000017298	CNOT1	94	97.055	Ailuropoda_melanoleuca
ENSNBRG00000019358	cnot1	90	98.177	ENSACIG00000016003	cnot1	93	98.177	Amphilophus_citrinellus
ENSNBRG00000019358	cnot1	100	89.474	ENSAPEG00000022342	cnot1	97	89.474	Amphiprion_percula
ENSNBRG00000019358	cnot1	100	95.958	ENSATEG00000012892	cnot1	97	95.958	Anabas_testudineus
ENSNBRG00000019358	cnot1	100	96.078	ENSAPLG00000007162	CNOT1	94	97.059	Anas_platyrhynchos
ENSNBRG00000019358	cnot1	90	82.933	ENSACAG00000001602	CNOT1	92	95.732	Anolis_carolinensis
ENSNBRG00000019358	cnot1	100	87.845	ENSANAG00000038198	CNOT1	94	87.845	Aotus_nancymaae
ENSNBRG00000019358	cnot1	100	96.439	ENSACLG00000014234	cnot1	97	96.439	Astatotilapia_calliptera
ENSNBRG00000019358	cnot1	100	87.591	ENSAMXG00000013170	cnot1	97	87.591	Astyanax_mexicanus
ENSNBRG00000019358	cnot1	100	97.055	ENSBTAG00000020782	CNOT1	94	97.055	Bos_taurus
ENSNBRG00000019358	cnot1	73	44.202	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSNBRG00000019358	cnot1	100	97.055	ENSCJAG00000011318	CNOT1	100	92.545	Callithrix_jacchus
ENSNBRG00000019358	cnot1	100	96.100	ENSCAFG00000008426	CNOT1	94	96.100	Canis_familiaris
ENSNBRG00000019358	cnot1	100	94.825	ENSCAFG00020010156	CNOT1	96	93.906	Canis_lupus_dingo
ENSNBRG00000019358	cnot1	100	97.055	ENSCHIG00000010452	CNOT1	94	97.055	Capra_hircus
ENSNBRG00000019358	cnot1	100	97.055	ENSTSYG00000006888	CNOT1	94	97.055	Carlito_syrichta
ENSNBRG00000019358	cnot1	100	97.195	ENSCPOG00000013026	CNOT1	94	97.195	Cavia_porcellus
ENSNBRG00000019358	cnot1	100	97.055	ENSCCAG00000026333	CNOT1	96	97.055	Cebus_capucinus
ENSNBRG00000019358	cnot1	100	97.055	ENSCATG00000032625	CNOT1	94	97.055	Cercocebus_atys
ENSNBRG00000019358	cnot1	100	97.195	ENSCLAG00000006289	CNOT1	94	97.195	Chinchilla_lanigera
ENSNBRG00000019358	cnot1	100	97.055	ENSCSAG00000004731	CNOT1	94	97.055	Chlorocebus_sabaeus
ENSNBRG00000019358	cnot1	78	97.727	ENSCHOG00000009712	CNOT1	75	97.527	Choloepus_hoffmanni
ENSNBRG00000019358	cnot1	98	96.914	ENSCPBG00000026222	CNOT1	94	95.972	Chrysemys_picta_bellii
ENSNBRG00000019358	cnot1	100	55.915	ENSCING00000009149	-	100	56.053	Ciona_intestinalis
ENSNBRG00000019358	cnot1	89	77.019	ENSCSAVG00000002414	-	93	77.019	Ciona_savignyi
ENSNBRG00000019358	cnot1	100	96.111	ENSCANG00000040534	CNOT1	94	96.111	Colobus_angolensis_palliatus
ENSNBRG00000019358	cnot1	100	96.914	ENSCGRG00001016365	Cnot1	94	96.914	Cricetulus_griseus_chok1gshd
ENSNBRG00000019358	cnot1	100	96.914	ENSCGRG00000001714	Cnot1	94	96.914	Cricetulus_griseus_crigri
ENSNBRG00000019358	cnot1	100	94.418	ENSCVAG00000018930	cnot1	97	93.648	Cyprinodon_variegatus
ENSNBRG00000019358	cnot1	100	86.144	ENSDARG00000004174	cnot1	97	86.144	Danio_rerio
ENSNBRG00000019358	cnot1	100	94.258	ENSDNOG00000013250	CNOT1	94	94.258	Dasypus_novemcinctus
ENSNBRG00000019358	cnot1	99	47.498	FBgn0085436	Not1	95	47.019	Drosophila_melanogaster
ENSNBRG00000019358	cnot1	86	94.880	ENSETEG00000012806	CNOT1	80	94.880	Echinops_telfairi
ENSNBRG00000019358	cnot1	86	71.940	ENSEBUG00000011534	cnot1	90	71.940	Eptatretus_burgeri
ENSNBRG00000019358	cnot1	100	97.055	ENSEASG00005005819	CNOT1	95	96.111	Equus_asinus_asinus
ENSNBRG00000019358	cnot1	100	97.055	ENSECAG00000009889	CNOT1	96	97.055	Equus_caballus
ENSNBRG00000019358	cnot1	88	96.536	ENSEEUG00000006015	CNOT1	80	96.536	Erinaceus_europaeus
ENSNBRG00000019358	cnot1	100	96.866	ENSELUG00000014085	cnot1	94	96.866	Esox_lucius
ENSNBRG00000019358	cnot1	100	96.111	ENSFCAG00000025155	CNOT1	94	96.111	Felis_catus
ENSNBRG00000019358	cnot1	100	97.055	ENSFALG00000007285	CNOT1	94	97.055	Ficedula_albicollis
ENSNBRG00000019358	cnot1	100	97.195	ENSFDAG00000013399	CNOT1	94	97.195	Fukomys_damarensis
ENSNBRG00000019358	cnot1	100	88.043	ENSFHEG00000020574	cnot1	97	88.043	Fundulus_heteroclitus
ENSNBRG00000019358	cnot1	90	99.385	ENSGMOG00000012864	cnot1	95	99.385	Gadus_morhua
ENSNBRG00000019358	cnot1	100	97.055	ENSGALG00000002301	CNOT1	94	97.055	Gallus_gallus
ENSNBRG00000019358	cnot1	100	99.018	ENSGAFG00000015005	cnot1	94	99.018	Gambusia_affinis
ENSNBRG00000019358	cnot1	90	88.471	ENSGACG00000002606	cnot1	99	90.465	Gasterosteus_aculeatus
ENSNBRG00000019358	cnot1	100	96.914	ENSGAGG00000022646	CNOT1	94	96.914	Gopherus_agassizii
ENSNBRG00000019358	cnot1	100	97.055	ENSGGOG00000009547	CNOT1	94	97.055	Gorilla_gorilla
ENSNBRG00000019358	cnot1	100	96.535	ENSHBUG00000001729	cnot1	97	96.535	Haplochromis_burtoni
ENSNBRG00000019358	cnot1	100	97.195	ENSHGLG00000014322	CNOT1	94	97.195	Heterocephalus_glaber_female
ENSNBRG00000019358	cnot1	100	87.051	ENSHCOG00000006501	cnot1	97	87.051	Hippocampus_comes
ENSNBRG00000019358	cnot1	100	85.135	ENSIPUG00000011915	cnot1	97	85.045	Ictalurus_punctatus
ENSNBRG00000019358	cnot1	100	97.195	ENSSTOG00000005490	CNOT1	94	97.195	Ictidomys_tridecemlineatus
ENSNBRG00000019358	cnot1	100	96.494	ENSJJAG00000000633	Cnot1	94	96.494	Jaculus_jaculus
ENSNBRG00000019358	cnot1	100	88.288	ENSKMAG00000006149	cnot1	97	87.740	Kryptolebias_marmoratus
ENSNBRG00000019358	cnot1	94	98.410	ENSLBEG00000004740	cnot1	96	98.410	Labrus_bergylta
ENSNBRG00000019358	cnot1	100	97.055	ENSLACG00000010869	CNOT1	96	97.055	Latimeria_chalumnae
ENSNBRG00000019358	cnot1	100	99.439	ENSLOCG00000006324	cnot1	94	99.439	Lepisosteus_oculatus
ENSNBRG00000019358	cnot1	100	96.914	ENSLAFG00000000098	CNOT1	94	96.914	Loxodonta_africana
ENSNBRG00000019358	cnot1	100	97.055	ENSMFAG00000035888	CNOT1	94	97.055	Macaca_fascicularis
ENSNBRG00000019358	cnot1	100	97.055	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSNBRG00000019358	cnot1	100	96.111	ENSMNEG00000031820	CNOT1	94	96.111	Macaca_nemestrina
ENSNBRG00000019358	cnot1	100	92.500	ENSMLEG00000040933	CNOT1	94	92.500	Mandrillus_leucophaeus
ENSNBRG00000019358	cnot1	100	88.475	ENSMAMG00000016524	cnot1	97	88.475	Mastacembelus_armatus
ENSNBRG00000019358	cnot1	100	96.439	ENSMZEG00005016210	cnot1	97	96.439	Maylandia_zebra
ENSNBRG00000019358	cnot1	100	97.055	ENSMGAG00000001908	CNOT1	94	97.055	Meleagris_gallopavo
ENSNBRG00000019358	cnot1	100	97.055	ENSMICG00000007071	CNOT1	94	97.055	Microcebus_murinus
ENSNBRG00000019358	cnot1	100	96.914	ENSMOCG00000017969	Cnot1	94	96.914	Microtus_ochrogaster
ENSNBRG00000019358	cnot1	100	93.726	ENSMMOG00000019134	cnot1	97	93.726	Mola_mola
ENSNBRG00000019358	cnot1	100	96.078	ENSMODG00000014199	CNOT1	95	97.059	Monodelphis_domestica
ENSNBRG00000019358	cnot1	100	88.022	ENSMALG00000008645	cnot1	97	88.022	Monopterus_albus
ENSNBRG00000019358	cnot1	97	98.592	MGP_CAROLIEiJ_G0031430	Cnot1	87	98.592	Mus_caroli
ENSNBRG00000019358	cnot1	100	96.914	ENSMUSG00000036550	Cnot1	94	96.914	Mus_musculus
ENSNBRG00000019358	cnot1	100	96.914	MGP_PahariEiJ_G0023028	Cnot1	94	96.914	Mus_pahari
ENSNBRG00000019358	cnot1	100	96.914	MGP_SPRETEiJ_G0032549	Cnot1	94	96.914	Mus_spretus
ENSNBRG00000019358	cnot1	100	97.055	ENSMPUG00000004830	CNOT1	94	97.055	Mustela_putorius_furo
ENSNBRG00000019358	cnot1	100	96.914	ENSMLUG00000003728	CNOT1	94	96.914	Myotis_lucifugus
ENSNBRG00000019358	cnot1	100	97.055	ENSNGAG00000018628	Cnot1	94	97.055	Nannospalax_galili
ENSNBRG00000019358	cnot1	100	97.055	ENSNLEG00000003566	CNOT1	94	97.055	Nomascus_leucogenys
ENSNBRG00000019358	cnot1	86	91.946	ENSMEUG00000006145	CNOT1	82	91.946	Notamacropus_eugenii
ENSNBRG00000019358	cnot1	79	98.592	ENSOPRG00000005604	CNOT1	73	98.592	Ochotona_princeps
ENSNBRG00000019358	cnot1	100	97.195	ENSODEG00000016337	CNOT1	94	97.195	Octodon_degus
ENSNBRG00000019358	cnot1	100	93.289	ENSONIG00000007358	cnot1	97	93.289	Oreochromis_niloticus
ENSNBRG00000019358	cnot1	90	96.107	ENSOANG00000012109	CNOT1	93	96.774	Ornithorhynchus_anatinus
ENSNBRG00000019358	cnot1	100	97.055	ENSOCUG00000006911	CNOT1	94	97.055	Oryctolagus_cuniculus
ENSNBRG00000019358	cnot1	100	99.299	ENSORLG00000013734	cnot1	94	99.299	Oryzias_latipes
ENSNBRG00000019358	cnot1	100	92.987	ENSORLG00020017012	cnot1	94	92.987	Oryzias_latipes_hni
ENSNBRG00000019358	cnot1	100	92.987	ENSORLG00015007091	cnot1	94	92.987	Oryzias_latipes_hsok
ENSNBRG00000019358	cnot1	100	86.628	ENSOMEG00000015124	cnot1	97	87.261	Oryzias_melastigma
ENSNBRG00000019358	cnot1	100	97.055	ENSOGAG00000000543	CNOT1	94	97.055	Otolemur_garnettii
ENSNBRG00000019358	cnot1	100	97.055	ENSOARG00000001567	CNOT1	94	97.055	Ovis_aries
ENSNBRG00000019358	cnot1	100	97.055	ENSPPAG00000022013	CNOT1	94	97.055	Pan_paniscus
ENSNBRG00000019358	cnot1	100	97.055	ENSPPRG00000004867	CNOT1	94	97.055	Panthera_pardus
ENSNBRG00000019358	cnot1	100	97.055	ENSPTIG00000012589	CNOT1	94	97.055	Panthera_tigris_altaica
ENSNBRG00000019358	cnot1	100	96.111	ENSPTRG00000008183	CNOT1	94	96.111	Pan_troglodytes
ENSNBRG00000019358	cnot1	100	84.134	ENSPANG00000020901	CNOT1	97	83.953	Papio_anubis
ENSNBRG00000019358	cnot1	100	98.457	ENSPKIG00000023538	CNOT1	94	98.457	Paramormyrops_kingsleyae
ENSNBRG00000019358	cnot1	99	88.536	ENSPKIG00000002914	CNOT1	97	88.536	Paramormyrops_kingsleyae
ENSNBRG00000019358	cnot1	100	97.055	ENSPSIG00000005499	CNOT1	94	97.055	Pelodiscus_sinensis
ENSNBRG00000019358	cnot1	100	72.365	ENSPMAG00000009381	cnot1	97	72.440	Petromyzon_marinus
ENSNBRG00000019358	cnot1	100	97.195	ENSPCIG00000007343	CNOT1	96	96.250	Phascolarctos_cinereus
ENSNBRG00000019358	cnot1	99	86.893	ENSPFOG00000003497	cnot1	97	87.385	Poecilia_formosa
ENSNBRG00000019358	cnot1	94	97.813	ENSPLAG00000014018	cnot1	96	97.813	Poecilia_latipinna
ENSNBRG00000019358	cnot1	94	97.813	ENSPMEG00000005868	cnot1	96	97.813	Poecilia_mexicana
ENSNBRG00000019358	cnot1	94	97.813	ENSPREG00000018793	cnot1	96	97.813	Poecilia_reticulata
ENSNBRG00000019358	cnot1	100	97.055	ENSPPYG00000007410	CNOT1	94	97.055	Pongo_abelii
ENSNBRG00000019358	cnot1	89	93.662	ENSPCAG00000003241	CNOT1	82	93.662	Procavia_capensis
ENSNBRG00000019358	cnot1	100	96.111	ENSPCOG00000027139	CNOT1	94	96.111	Propithecus_coquereli
ENSNBRG00000019358	cnot1	100	89.762	ENSPVAG00000004243	CNOT1	94	89.762	Pteropus_vampyrus
ENSNBRG00000019358	cnot1	100	96.535	ENSPNYG00000012919	cnot1	97	96.535	Pundamilia_nyererei
ENSNBRG00000019358	cnot1	100	87.307	ENSPNAG00000000246	cnot1	97	86.673	Pygocentrus_nattereri
ENSNBRG00000019358	cnot1	100	96.774	ENSRNOG00000012271	Cnot1	94	96.774	Rattus_norvegicus
ENSNBRG00000019358	cnot1	100	96.111	ENSRBIG00000044598	CNOT1	94	96.111	Rhinopithecus_bieti
ENSNBRG00000019358	cnot1	100	97.055	ENSRROG00000000906	CNOT1	94	97.055	Rhinopithecus_roxellana
ENSNBRG00000019358	cnot1	50	34.074	YCR093W	CDC39	54	41.818	Saccharomyces_cerevisiae
ENSNBRG00000019358	cnot1	100	92.287	ENSSBOG00000029155	CNOT1	94	92.287	Saimiri_boliviensis_boliviensis
ENSNBRG00000019358	cnot1	100	97.195	ENSSHAG00000012187	CNOT1	94	97.195	Sarcophilus_harrisii
ENSNBRG00000019358	cnot1	100	92.847	ENSSFOG00015017614	cnot1	94	92.847	Scleropages_formosus
ENSNBRG00000019358	cnot1	100	95.000	ENSSMAG00000013844	cnot1	97	95.000	Scophthalmus_maximus
ENSNBRG00000019358	cnot1	100	96.054	ENSSDUG00000021491	cnot1	97	96.054	Seriola_dumerili
ENSNBRG00000019358	cnot1	100	96.054	ENSSLDG00000014816	cnot1	97	96.054	Seriola_lalandi_dorsalis
ENSNBRG00000019358	cnot1	86	97.800	ENSSARG00000000762	CNOT1	84	97.800	Sorex_araneus
ENSNBRG00000019358	cnot1	100	88.214	ENSSPAG00000018802	cnot1	97	88.214	Stegastes_partitus
ENSNBRG00000019358	cnot1	100	96.914	ENSSSCG00000002799	CNOT1	94	96.914	Sus_scrofa
ENSNBRG00000019358	cnot1	100	97.055	ENSTGUG00000005919	CNOT1	94	97.055	Taeniopygia_guttata
ENSNBRG00000019358	cnot1	100	99.018	ENSTNIG00000018706	cnot1	94	99.018	Tetraodon_nigroviridis
ENSNBRG00000019358	cnot1	78	97.887	ENSTBEG00000000720	CNOT1	74	97.887	Tupaia_belangeri
ENSNBRG00000019358	cnot1	95	97.055	ENSTTRG00000008460	CNOT1	89	97.055	Tursiops_truncatus
ENSNBRG00000019358	cnot1	100	97.055	ENSUAMG00000009251	CNOT1	94	97.055	Ursus_americanus
ENSNBRG00000019358	cnot1	100	97.055	ENSUMAG00000021291	CNOT1	94	97.055	Ursus_maritimus
ENSNBRG00000019358	cnot1	96	93.689	ENSVPAG00000008846	CNOT1	91	93.689	Vicugna_pacos
ENSNBRG00000019358	cnot1	100	94.825	ENSVVUG00000024037	CNOT1	96	93.906	Vulpes_vulpes
ENSNBRG00000019358	cnot1	99	89.356	ENSXETG00000015900	cnot1	92	89.356	Xenopus_tropicalis
ENSNBRG00000019358	cnot1	100	88.225	ENSXCOG00000013552	cnot1	97	88.225	Xiphophorus_couchianus
ENSNBRG00000019358	cnot1	100	88.225	ENSXMAG00000006031	cnot1	97	88.225	Xiphophorus_maculatus