EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000019433 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: PKR
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7280 bases
Position: chrJH422469.1:17413-24692
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025474	dsrm	PF00035.26	4.1e-26	1	2
ENSNBRP00000025474	dsrm	PF00035.26	4.1e-26	2	2
ENSNBRP00000025524	dsrm	PF00035.26	1.3e-24	1	2
ENSNBRP00000025524	dsrm	PF00035.26	1.3e-24	2	2
ENSNBRP00000025510	dsrm	PF00035.26	1.5e-24	1	2
ENSNBRP00000025510	dsrm	PF00035.26	1.5e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026141	-	1401	-	ENSNBRP00000025474	466 (aa)	-	-
ENSNBRT00000026207	-	840	-	ENSNBRP00000025537	279 (aa)	-	-
ENSNBRT00000026194	-	1452	-	ENSNBRP00000025524	483 (aa)	-	-
ENSNBRT00000026180	-	1497	-	ENSNBRP00000025510	498 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000019433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000019433	-	100	48.140	ENSNBRG00000011967	eif2ak2	100	50.000
ENSNBRG00000019433	-	99	42.446	ENSNBRG00000019369	-	99	42.446
ENSNBRG00000019433	-	96	56.550	ENSNBRG00000012219	-	99	44.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019433	-	100	45.233	ENSAPOG00000010636	-	92	45.233	Acanthochromis_polyacanthus
ENSNBRG00000019433	-	100	48.600	ENSAPOG00000010706	eif2ak2	94	48.600	Acanthochromis_polyacanthus
ENSNBRG00000019433	-	91	53.846	ENSAPOG00000010662	eif2ak2	87	53.846	Acanthochromis_polyacanthus
ENSNBRG00000019433	-	88	50.000	ENSACIG00000006955	-	94	47.534	Amphilophus_citrinellus
ENSNBRG00000019433	-	99	56.698	ENSACIG00000007027	eif2ak2	99	46.667	Amphilophus_citrinellus
ENSNBRG00000019433	-	99	46.914	ENSACIG00000006536	eif2ak2	99	52.564	Amphilophus_citrinellus
ENSNBRG00000019433	-	93	68.564	ENSACIG00000006710	-	98	64.156	Amphilophus_citrinellus
ENSNBRG00000019433	-	88	62.687	ENSACIG00000006777	eif2ak2	99	62.687	Amphilophus_citrinellus
ENSNBRG00000019433	-	92	49.682	ENSAOCG00000003397	eif2ak2	87	50.314	Amphiprion_ocellaris
ENSNBRG00000019433	-	100	45.842	ENSAOCG00000003414	-	92	45.842	Amphiprion_ocellaris
ENSNBRG00000019433	-	100	45.570	ENSAPEG00000023675	eif2ak2	100	45.570	Amphiprion_percula
ENSNBRG00000019433	-	88	54.545	ENSAPEG00000023879	eif2ak2	87	49.686	Amphiprion_percula
ENSNBRG00000019433	-	91	57.544	ENSATEG00000015535	eif2ak2	83	57.544	Anabas_testudineus
ENSNBRG00000019433	-	96	45.436	ENSATEG00000015425	eif2ak2	97	46.930	Anabas_testudineus
ENSNBRG00000019433	-	100	45.021	ENSATEG00000015063	eif2ak2	99	52.591	Anabas_testudineus
ENSNBRG00000019433	-	99	44.948	ENSACLG00000023843	-	99	51.232	Astatotilapia_calliptera
ENSNBRG00000019433	-	86	47.500	ENSAMXG00000003716	eif2ak2	91	54.545	Astyanax_mexicanus
ENSNBRG00000019433	-	100	40.411	ENSCSEG00000012878	eif2ak2	100	40.925	Cynoglossus_semilaevis
ENSNBRG00000019433	-	99	42.716	ENSCSEG00000012820	-	100	42.716	Cynoglossus_semilaevis
ENSNBRG00000019433	-	100	46.561	ENSCVAG00000014725	eif2ak2	100	47.354	Cyprinodon_variegatus
ENSNBRG00000019433	-	93	42.094	ENSCVAG00000003185	-	100	41.538	Cyprinodon_variegatus
ENSNBRG00000019433	-	55	50.769	ENSDARG00000052396	pkz	59	46.429	Danio_rerio
ENSNBRG00000019433	-	93	49.825	ENSDARG00000068729	eif2ak2	97	35.928	Danio_rerio
ENSNBRG00000019433	-	58	39.752	ENSELUG00000018078	-	60	39.752	Esox_lucius
ENSNBRG00000019433	-	99	47.732	ENSELUG00000018164	eif2ak2	98	41.906	Esox_lucius
ENSNBRG00000019433	-	95	38.819	ENSGMOG00000018784	eif2ak2	99	39.651	Gadus_morhua
ENSNBRG00000019433	-	89	37.415	ENSGMOG00000018813	eif2ak2	97	40.482	Gadus_morhua
ENSNBRG00000019433	-	97	47.143	ENSGAFG00000005231	-	99	47.143	Gambusia_affinis
ENSNBRG00000019433	-	99	45.181	ENSHBUG00000022151	-	96	45.582	Haplochromis_burtoni
ENSNBRG00000019433	-	88	42.857	ENSHBUG00000022216	-	94	37.179	Haplochromis_burtoni
ENSNBRG00000019433	-	96	47.826	ENSHCOG00000010443	-	98	39.804	Hippocampus_comes
ENSNBRG00000019433	-	99	50.769	ENSIPUG00000019933	eif2ak2	99	41.718	Ictalurus_punctatus
ENSNBRG00000019433	-	99	52.148	ENSMAMG00000017311	eif2ak2	99	52.148	Mastacembelus_armatus
ENSNBRG00000019433	-	94	52.273	ENSMAMG00000017342	eif2ak2	99	45.984	Mastacembelus_armatus
ENSNBRG00000019433	-	100	42.171	ENSMZEG00005009825	eif2ak2	100	42.171	Maylandia_zebra
ENSNBRG00000019433	-	99	44.779	ENSMZEG00005009773	eif2ak2	99	51.378	Maylandia_zebra
ENSNBRG00000019433	-	98	44.402	ENSMMOG00000000711	-	99	44.402	Mola_mola
ENSNBRG00000019433	-	98	47.222	ENSMALG00000005083	eif2ak2	99	47.222	Monopterus_albus
ENSNBRG00000019433	-	69	47.692	ENSMALG00000005115	eif2ak2	83	43.229	Monopterus_albus
ENSNBRG00000019433	-	99	64.898	ENSONIG00000010933	-	100	65.298	Oreochromis_niloticus
ENSNBRG00000019433	-	92	55.556	ENSORLG00000018980	-	87	51.163	Oryzias_latipes
ENSNBRG00000019433	-	100	45.000	ENSORLG00000012432	eif2ak2	100	47.716	Oryzias_latipes
ENSNBRG00000019433	-	100	56.944	ENSORLG00020014108	-	100	38.163	Oryzias_latipes_hni
ENSNBRG00000019433	-	100	55.989	ENSORLG00020014073	eif2ak2	91	55.989	Oryzias_latipes_hni
ENSNBRG00000019433	-	100	46.250	ENSORLG00015023155	eif2ak2	100	48.413	Oryzias_latipes_hsok
ENSNBRG00000019433	-	100	54.167	ENSORLG00015023149	eif2ak2	100	39.463	Oryzias_latipes_hsok
ENSNBRG00000019433	-	100	41.942	ENSOMEG00000019857	eif2ak2	96	45.669	Oryzias_melastigma
ENSNBRG00000019433	-	99	43.287	ENSOMEG00000019925	-	100	43.287	Oryzias_melastigma
ENSNBRG00000019433	-	99	41.189	ENSPKIG00000024036	eif2ak2	99	42.213	Paramormyrops_kingsleyae
ENSNBRG00000019433	-	61	35.165	ENSPKIG00000024012	pkz	64	35.165	Paramormyrops_kingsleyae
ENSNBRG00000019433	-	99	49.869	ENSPMGG00000001652	eif2ak2	99	45.749	Periophthalmus_magnuspinnatus
ENSNBRG00000019433	-	86	50.746	ENSPMGG00000001624	-	96	50.746	Periophthalmus_magnuspinnatus
ENSNBRG00000019433	-	84	57.812	ENSPLAG00000023307	-	94	57.812	Poecilia_latipinna
ENSNBRG00000019433	-	94	41.575	ENSPMEG00000013631	eif2ak2	99	41.575	Poecilia_mexicana
ENSNBRG00000019433	-	96	42.797	ENSPMEG00000013612	-	97	42.797	Poecilia_mexicana
ENSNBRG00000019433	-	97	40.873	ENSPREG00000007905	-	98	40.873	Poecilia_reticulata
ENSNBRG00000019433	-	87	96.667	ENSPNYG00000023883	-	97	96.667	Pundamilia_nyererei
ENSNBRG00000019433	-	97	46.921	ENSPNYG00000014187	eif2ak2	97	46.921	Pundamilia_nyererei
ENSNBRG00000019433	-	99	45.167	ENSPNYG00000014220	-	99	45.167	Pundamilia_nyererei
ENSNBRG00000019433	-	91	52.703	ENSPNAG00000000508	eif2ak2	93	40.606	Pygocentrus_nattereri
ENSNBRG00000019433	-	63	48.677	ENSSFOG00015008967	-	83	35.248	Scleropages_formosus
ENSNBRG00000019433	-	99	47.755	ENSSMAG00000010296	-	100	56.338	Scophthalmus_maximus
ENSNBRG00000019433	-	91	66.667	ENSSDUG00000002922	eif2ak2	99	43.878	Seriola_dumerili
ENSNBRG00000019433	-	100	46.721	ENSSDUG00000002837	eif2ak2	100	40.778	Seriola_dumerili
ENSNBRG00000019433	-	80	45.455	ENSSLDG00000024867	eif2ak2	94	45.455	Seriola_lalandi_dorsalis
ENSNBRG00000019433	-	83	57.851	ENSSLDG00000024886	-	99	43.002	Seriola_lalandi_dorsalis
ENSNBRG00000019433	-	93	56.452	ENSSLDG00000024874	eif2ak2	94	47.887	Seriola_lalandi_dorsalis
ENSNBRG00000019433	-	100	45.030	ENSSLDG00000024893	-	100	43.091	Seriola_lalandi_dorsalis
ENSNBRG00000019433	-	99	44.489	ENSSPAG00000007629	-	85	49.686	Stegastes_partitus
ENSNBRG00000019433	-	76	53.333	ENSSPAG00000007476	-	77	53.333	Stegastes_partitus
ENSNBRG00000019433	-	95	43.271	ENSTRUG00000022205	-	97	43.416	Takifugu_rubripes
ENSNBRG00000019433	-	96	38.356	ENSXETG00000009025	pkr2	98	38.356	Xenopus_tropicalis
ENSNBRG00000019433	-	97	39.413	ENSXCOG00000006961	-	97	45.968	Xiphophorus_couchianus
ENSNBRG00000019433	-	97	42.737	ENSXMAG00000006536	eif2ak2	98	42.737	Xiphophorus_maculatus
ENSNBRG00000019433	-	91	42.070	ENSXMAG00000006521	eif2ak2	99	42.070	Xiphophorus_maculatus