EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019447 (Gene tree)
Gene ID: 102789044
Gene Symbol: zgc:171480
Alias: -
Full Name: 39S ribosomal protein L55%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2835 bases
Position: chrJH422274.1:19370252-19373086
Accession: 102789044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025436	Mitoc_L55	PF09776.9	8.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026102	-	1772	XM_006781100	ENSNBRP00000025436	138 (aa)	XP_006781163	UPI0003EC1985

Gene Model

Click here to download ENSNBRG00000019447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019447	zgc:171480	98	63.194	ENSAPOG00000002881	zgc:171480	100	63.194	Acanthochromis_polyacanthus
ENSNBRG00000019447	zgc:171480	100	81.884	ENSACIG00000001646	zgc:171480	99	81.884	Amphilophus_citrinellus
ENSNBRG00000019447	zgc:171480	98	65.972	ENSAOCG00000016155	zgc:171480	100	65.972	Amphiprion_ocellaris
ENSNBRG00000019447	zgc:171480	98	65.972	ENSAPEG00000022327	zgc:171480	100	65.972	Amphiprion_percula
ENSNBRG00000019447	zgc:171480	99	62.329	ENSATEG00000005625	zgc:171480	99	62.329	Anabas_testudineus
ENSNBRG00000019447	zgc:171480	86	53.333	ENSACAG00000006897	-	90	53.333	Anolis_carolinensis
ENSNBRG00000019447	zgc:171480	100	97.826	ENSACLG00000005172	zgc:171480	100	97.826	Astatotilapia_calliptera
ENSNBRG00000019447	zgc:171480	74	63.725	ENSAMXG00000043839	zgc:171480	74	66.000	Astyanax_mexicanus
ENSNBRG00000019447	zgc:171480	72	57.000	ENSCPBG00000001771	-	80	57.000	Chrysemys_picta_bellii
ENSNBRG00000019447	zgc:171480	99	52.113	ENSCSEG00000019533	zgc:171480	98	52.113	Cynoglossus_semilaevis
ENSNBRG00000019447	zgc:171480	85	55.085	ENSDARG00000043402	zgc:171480	87	55.085	Danio_rerio
ENSNBRG00000019447	zgc:171480	74	56.311	ENSELUG00000007716	zgc:171480	79	56.311	Esox_lucius
ENSNBRG00000019447	zgc:171480	66	49.451	ENSFALG00000001083	-	94	49.451	Ficedula_albicollis
ENSNBRG00000019447	zgc:171480	75	69.903	ENSFHEG00000000203	zgc:171480	76	68.571	Fundulus_heteroclitus
ENSNBRG00000019447	zgc:171480	73	67.327	ENSGMOG00000019009	zgc:171480	99	67.327	Gadus_morhua
ENSNBRG00000019447	zgc:171480	75	47.573	ENSGALG00000038820	-	90	48.571	Gallus_gallus
ENSNBRG00000019447	zgc:171480	89	60.938	ENSGAFG00000004832	-	89	60.938	Gambusia_affinis
ENSNBRG00000019447	zgc:171480	67	77.174	ENSGACG00000002136	zgc:171480	100	77.174	Gasterosteus_aculeatus
ENSNBRG00000019447	zgc:171480	72	53.000	ENSGAGG00000001806	-	81	53.000	Gopherus_agassizii
ENSNBRG00000019447	zgc:171480	100	97.826	ENSHBUG00000007895	zgc:171480	100	97.826	Haplochromis_burtoni
ENSNBRG00000019447	zgc:171480	99	61.314	ENSHCOG00000003526	zgc:171480	73	61.314	Hippocampus_comes
ENSNBRG00000019447	zgc:171480	72	62.000	ENSIPUG00000001273	mrpl55	76	62.000	Ictalurus_punctatus
ENSNBRG00000019447	zgc:171480	89	62.698	ENSKMAG00000002011	zgc:171480	99	62.698	Kryptolebias_marmoratus
ENSNBRG00000019447	zgc:171480	98	68.148	ENSLBEG00000010915	zgc:171480	100	68.148	Labrus_bergylta
ENSNBRG00000019447	zgc:171480	98	68.148	ENSLBEG00000016107	-	100	68.148	Labrus_bergylta
ENSNBRG00000019447	zgc:171480	72	59.406	ENSLACG00000016281	zgc:171480	77	59.406	Latimeria_chalumnae
ENSNBRG00000019447	zgc:171480	100	60.667	ENSMAMG00000022250	zgc:171480	100	60.667	Mastacembelus_armatus
ENSNBRG00000019447	zgc:171480	100	97.101	ENSMZEG00005015585	zgc:171480	100	97.101	Maylandia_zebra
ENSNBRG00000019447	zgc:171480	75	47.619	ENSMGAG00000002612	-	90	47.619	Meleagris_gallopavo
ENSNBRG00000019447	zgc:171480	83	48.246	ENSMMOG00000008740	-	87	48.246	Mola_mola
ENSNBRG00000019447	zgc:171480	78	68.224	ENSMALG00000019823	zgc:171480	85	68.224	Monopterus_albus
ENSNBRG00000019447	zgc:171480	98	94.815	ENSONIG00000007645	zgc:171480	100	94.815	Oreochromis_niloticus
ENSNBRG00000019447	zgc:171480	75	65.385	ENSORLG00020006963	zgc:171480	78	65.385	Oryzias_latipes_hni
ENSNBRG00000019447	zgc:171480	75	65.385	ENSORLG00015003266	zgc:171480	78	65.385	Oryzias_latipes_hsok
ENSNBRG00000019447	zgc:171480	75	66.346	ENSOMEG00000008184	zgc:171480	76	66.346	Oryzias_melastigma
ENSNBRG00000019447	zgc:171480	71	62.626	ENSPKIG00000006753	zgc:171480	77	62.626	Paramormyrops_kingsleyae
ENSNBRG00000019447	zgc:171480	72	54.000	ENSPSIG00000010893	-	80	54.000	Pelodiscus_sinensis
ENSNBRG00000019447	zgc:171480	76	61.321	ENSPMGG00000012657	-	82	61.321	Periophthalmus_magnuspinnatus
ENSNBRG00000019447	zgc:171480	67	48.421	ENSPMAG00000000867	zgc:171480	89	46.154	Petromyzon_marinus
ENSNBRG00000019447	zgc:171480	72	54.000	ENSPCIG00000021848	-	79	54.000	Phascolarctos_cinereus
ENSNBRG00000019447	zgc:171480	88	59.843	ENSPFOG00000012703	zgc:171480	91	59.843	Poecilia_formosa
ENSNBRG00000019447	zgc:171480	88	60.630	ENSPREG00000020328	zgc:171480	91	60.630	Poecilia_reticulata
ENSNBRG00000019447	zgc:171480	72	64.000	ENSPNAG00000017309	zgc:171480	76	64.000	Pygocentrus_nattereri
ENSNBRG00000019447	zgc:171480	97	52.206	ENSSFOG00015015668	mrpl55	100	52.206	Scleropages_formosus
ENSNBRG00000019447	zgc:171480	99	63.571	ENSSMAG00000005429	zgc:171480	99	63.571	Scophthalmus_maximus
ENSNBRG00000019447	zgc:171480	99	60.140	ENSSDUG00000022556	zgc:171480	95	60.140	Seriola_dumerili
ENSNBRG00000019447	zgc:171480	99	59.441	ENSSLDG00000019598	zgc:171480	95	59.441	Seriola_lalandi_dorsalis
ENSNBRG00000019447	zgc:171480	75	49.515	ENSSPUG00000000735	-	82	49.515	Sphenodon_punctatus
ENSNBRG00000019447	zgc:171480	98	63.889	ENSSPAG00000011598	zgc:171480	100	63.889	Stegastes_partitus
ENSNBRG00000019447	zgc:171480	73	68.317	ENSTRUG00000003082	zgc:171480	71	68.317	Takifugu_rubripes
ENSNBRG00000019447	zgc:171480	67	74.194	ENSXCOG00000005887	zgc:171480	76	74.194	Xiphophorus_couchianus
ENSNBRG00000019447	zgc:171480	88	59.055	ENSXMAG00000007937	zgc:171480	91	59.055	Xiphophorus_maculatus