EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019464 (Gene tree)
Gene ID: 102793188
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: small subunit processome component 20 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 25640 bases
Position: chrJH422339.1:12110-37749
Accession: 102793188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025788	DRIM	PF07539.12	3.1e-85	1	2
ENSNBRP00000025788	DRIM	PF07539.12	3.1e-85	2	2
ENSNBRP00000025829	DRIM	PF07539.12	2.4e-84	1	2
ENSNBRP00000025829	DRIM	PF07539.12	2.4e-84	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026507	-	6213	-	ENSNBRP00000025829	2070 (aa)	-	-
ENSNBRT00000026465	-	6552	XM_006799749	ENSNBRP00000025788	2183 (aa)	XP_006799812	-

Gene Model

Click here to download ENSNBRG00000019464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019464	utp20	99	75.385	ENSG00000120800	UTP20	82	75.385	Homo_sapiens
ENSNBRG00000019464	utp20	99	92.537	ENSAPOG00000002429	utp20	79	92.537	Acanthochromis_polyacanthus
ENSNBRG00000019464	utp20	99	75.385	ENSAMEG00000016416	UTP20	81	75.385	Ailuropoda_melanoleuca
ENSNBRG00000019464	utp20	99	95.522	ENSACIG00000007987	utp20	80	95.522	Amphilophus_citrinellus
ENSNBRG00000019464	utp20	99	92.537	ENSAPEG00000011605	utp20	80	92.537	Amphiprion_percula
ENSNBRG00000019464	utp20	96	96.970	ENSATEG00000005601	utp20	80	96.970	Anabas_testudineus
ENSNBRG00000019464	utp20	99	82.000	ENSAPLG00000015651	UTP20	83	82.000	Anas_platyrhynchos
ENSNBRG00000019464	utp20	99	79.688	ENSACAG00000011671	UTP20	80	79.688	Anolis_carolinensis
ENSNBRG00000019464	utp20	97	75.385	ENSANAG00000027152	UTP20	81	75.385	Aotus_nancymaae
ENSNBRG00000019464	utp20	96	100.000	ENSACLG00000008064	utp20	78	98.507	Astatotilapia_calliptera
ENSNBRG00000019464	utp20	99	77.941	ENSAMXG00000021039	utp20	81	77.941	Astyanax_mexicanus
ENSNBRG00000019464	utp20	99	75.385	ENSBTAG00000003239	UTP20	82	75.385	Bos_taurus
ENSNBRG00000019464	utp20	80	30.000	WBGene00007050	utp-20	61	32.258	Caenorhabditis_elegans
ENSNBRG00000019464	utp20	99	77.612	ENSCJAG00000001913	UTP20	81	77.612	Callithrix_jacchus
ENSNBRG00000019464	utp20	99	73.846	ENSCAFG00000006964	UTP20	81	73.846	Canis_familiaris
ENSNBRG00000019464	utp20	99	73.846	ENSCAFG00020024305	UTP20	81	73.846	Canis_lupus_dingo
ENSNBRG00000019464	utp20	99	75.385	ENSCHIG00000009221	UTP20	81	75.385	Capra_hircus
ENSNBRG00000019464	utp20	99	73.846	ENSTSYG00000003040	UTP20	81	73.846	Carlito_syrichta
ENSNBRG00000019464	utp20	99	80.392	ENSCAPG00000014920	UTP20	87	80.392	Cavia_aperea
ENSNBRG00000019464	utp20	99	78.788	ENSCPOG00000003129	UTP20	87	77.612	Cavia_porcellus
ENSNBRG00000019464	utp20	99	78.431	ENSCCAG00000031422	UTP20	81	78.431	Cebus_capucinus
ENSNBRG00000019464	utp20	99	75.385	ENSCATG00000035636	UTP20	82	75.385	Cercocebus_atys
ENSNBRG00000019464	utp20	99	77.273	ENSCLAG00000011569	UTP20	81	76.119	Chinchilla_lanigera
ENSNBRG00000019464	utp20	99	75.385	ENSCSAG00000003388	UTP20	82	75.385	Chlorocebus_sabaeus
ENSNBRG00000019464	utp20	85	53.165	ENSCHOG00000003532	UTP20	65	51.214	Choloepus_hoffmanni
ENSNBRG00000019464	utp20	96	60.849	ENSCPBG00000004844	UTP20	84	60.159	Chrysemys_picta_bellii
ENSNBRG00000019464	utp20	82	47.458	ENSCING00000003395	-	65	47.458	Ciona_intestinalis
ENSNBRG00000019464	utp20	77	54.717	ENSCSAVG00000008252	-	62	54.717	Ciona_savignyi
ENSNBRG00000019464	utp20	99	75.385	ENSCANG00000034768	UTP20	85	75.385	Colobus_angolensis_palliatus
ENSNBRG00000019464	utp20	99	73.846	ENSCGRG00001017151	Utp20	81	73.846	Cricetulus_griseus_chok1gshd
ENSNBRG00000019464	utp20	99	73.846	ENSCGRG00000008595	Utp20	81	73.846	Cricetulus_griseus_crigri
ENSNBRG00000019464	utp20	96	85.294	ENSCSEG00000014760	utp20	80	85.294	Cynoglossus_semilaevis
ENSNBRG00000019464	utp20	98	91.176	ENSCVAG00000001727	utp20	80	91.176	Cyprinodon_variegatus
ENSNBRG00000019464	utp20	99	78.788	ENSDARG00000099280	utp20	80	78.788	Danio_rerio
ENSNBRG00000019464	utp20	99	75.385	ENSDNOG00000016845	UTP20	80	75.385	Dasypus_novemcinctus
ENSNBRG00000019464	utp20	99	82.353	ENSDORG00000014762	Utp20	81	82.353	Dipodomys_ordii
ENSNBRG00000019464	utp20	94	77.612	ENSETEG00000019983	UTP20	76	77.612	Echinops_telfairi
ENSNBRG00000019464	utp20	99	73.846	ENSEASG00005019981	UTP20	82	73.846	Equus_asinus_asinus
ENSNBRG00000019464	utp20	99	73.846	ENSECAG00000006876	UTP20	82	73.846	Equus_caballus
ENSNBRG00000019464	utp20	65	64.286	ENSEEUG00000003774	UTP20	54	61.765	Erinaceus_europaeus
ENSNBRG00000019464	utp20	99	91.045	ENSELUG00000000798	utp20	80	91.045	Esox_lucius
ENSNBRG00000019464	utp20	99	76.923	ENSFCAG00000006150	UTP20	80	76.923	Felis_catus
ENSNBRG00000019464	utp20	97	57.995	ENSFALG00000011135	UTP20	85	57.596	Ficedula_albicollis
ENSNBRG00000019464	utp20	85	76.119	ENSFDAG00000007567	UTP20	77	76.119	Fukomys_damarensis
ENSNBRG00000019464	utp20	96	92.647	ENSFHEG00000004142	utp20	79	92.647	Fundulus_heteroclitus
ENSNBRG00000019464	utp20	99	89.062	ENSGMOG00000006762	utp20	80	89.062	Gadus_morhua
ENSNBRG00000019464	utp20	99	78.125	ENSGALG00000011643	UTP20	82	78.125	Gallus_gallus
ENSNBRG00000019464	utp20	95	96.296	ENSGAFG00000006986	utp20	79	95.455	Gambusia_affinis
ENSNBRG00000019464	utp20	99	90.769	ENSGACG00000019092	utp20	80	90.769	Gasterosteus_aculeatus
ENSNBRG00000019464	utp20	75	60.985	ENSGAGG00000011169	UTP20	85	60.253	Gopherus_agassizii
ENSNBRG00000019464	utp20	99	75.385	ENSGGOG00000004904	UTP20	80	75.385	Gorilla_gorilla
ENSNBRG00000019464	utp20	99	98.507	ENSHBUG00000010613	utp20	80	98.507	Haplochromis_burtoni
ENSNBRG00000019464	utp20	99	77.612	ENSHGLG00000006422	UTP20	81	77.612	Heterocephalus_glaber_female
ENSNBRG00000019464	utp20	99	77.612	ENSHGLG00100001086	UTP20	81	77.612	Heterocephalus_glaber_male
ENSNBRG00000019464	utp20	99	83.582	ENSHCOG00000005421	utp20	81	83.582	Hippocampus_comes
ENSNBRG00000019464	utp20	96	81.818	ENSIPUG00000013717	utp20	80	78.571	Ictalurus_punctatus
ENSNBRG00000019464	utp20	99	77.612	ENSSTOG00000015995	UTP20	81	77.612	Ictidomys_tridecemlineatus
ENSNBRG00000019464	utp20	97	75.000	ENSJJAG00000019321	Utp20	78	73.846	Jaculus_jaculus
ENSNBRG00000019464	utp20	96	93.939	ENSKMAG00000005972	utp20	80	91.176	Kryptolebias_marmoratus
ENSNBRG00000019464	utp20	96	92.647	ENSLBEG00000000781	utp20	80	92.647	Labrus_bergylta
ENSNBRG00000019464	utp20	72	84.375	ENSLACG00000010098	UTP20	74	84.375	Latimeria_chalumnae
ENSNBRG00000019464	utp20	88	89.062	ENSLOCG00000015197	utp20	67	89.062	Lepisosteus_oculatus
ENSNBRG00000019464	utp20	99	77.612	ENSLAFG00000012983	UTP20	82	72.000	Loxodonta_africana
ENSNBRG00000019464	utp20	99	75.385	ENSMFAG00000037766	UTP20	82	75.385	Macaca_fascicularis
ENSNBRG00000019464	utp20	99	75.385	ENSMMUG00000012891	UTP20	82	75.385	Macaca_mulatta
ENSNBRG00000019464	utp20	99	75.385	ENSMNEG00000037418	UTP20	82	75.385	Macaca_nemestrina
ENSNBRG00000019464	utp20	99	75.385	ENSMLEG00000029148	UTP20	82	75.385	Mandrillus_leucophaeus
ENSNBRG00000019464	utp20	99	88.060	ENSMAMG00000002063	utp20	80	88.060	Mastacembelus_armatus
ENSNBRG00000019464	utp20	99	98.507	ENSMZEG00005018123	utp20	80	98.507	Maylandia_zebra
ENSNBRG00000019464	utp20	99	78.125	ENSMGAG00000011726	UTP20	81	78.125	Meleagris_gallopavo
ENSNBRG00000019464	utp20	54	72.308	ENSMAUG00000011898	Utp20	72	72.308	Mesocricetus_auratus
ENSNBRG00000019464	utp20	99	73.846	ENSMICG00000015736	UTP20	82	68.493	Microcebus_murinus
ENSNBRG00000019464	utp20	97	75.000	ENSMOCG00000015242	Utp20	80	73.846	Microtus_ochrogaster
ENSNBRG00000019464	utp20	98	92.308	ENSMMOG00000003360	utp20	80	92.308	Mola_mola
ENSNBRG00000019464	utp20	99	76.923	ENSMODG00000003141	UTP20	81	76.923	Monodelphis_domestica
ENSNBRG00000019464	utp20	99	94.030	ENSMALG00000002723	utp20	80	94.030	Monopterus_albus
ENSNBRG00000019464	utp20	98	73.438	MGP_CAROLIEiJ_G0015713	Utp20	81	72.308	Mus_caroli
ENSNBRG00000019464	utp20	99	72.308	ENSMUSG00000004356	Utp20	81	72.308	Mus_musculus
ENSNBRG00000019464	utp20	99	72.308	MGP_PahariEiJ_G0031372	Utp20	81	72.308	Mus_pahari
ENSNBRG00000019464	utp20	99	72.308	MGP_SPRETEiJ_G0016531	Utp20	86	71.429	Mus_spretus
ENSNBRG00000019464	utp20	99	77.612	ENSMPUG00000011641	UTP20	81	77.612	Mustela_putorius_furo
ENSNBRG00000019464	utp20	98	76.562	ENSMLUG00000002313	UTP20	88	75.385	Myotis_lucifugus
ENSNBRG00000019464	utp20	99	73.846	ENSNGAG00000013738	Utp20	81	73.846	Nannospalax_galili
ENSNBRG00000019464	utp20	99	75.385	ENSNLEG00000006166	UTP20	80	75.385	Nomascus_leucogenys
ENSNBRG00000019464	utp20	92	81.481	ENSMEUG00000015457	UTP20	73	60.976	Notamacropus_eugenii
ENSNBRG00000019464	utp20	87	51.131	ENSOPRG00000010546	UTP20	64	55.769	Ochotona_princeps
ENSNBRG00000019464	utp20	99	77.612	ENSODEG00000013411	UTP20	81	77.612	Octodon_degus
ENSNBRG00000019464	utp20	99	100.000	ENSONIG00000009910	utp20	80	100.000	Oreochromis_niloticus
ENSNBRG00000019464	utp20	99	76.190	ENSOANG00000005578	UTP20	83	76.190	Ornithorhynchus_anatinus
ENSNBRG00000019464	utp20	96	76.562	ENSOCUG00000010475	UTP20	70	76.562	Oryctolagus_cuniculus
ENSNBRG00000019464	utp20	94	94.030	ENSORLG00000008900	utp20	73	94.030	Oryzias_latipes
ENSNBRG00000019464	utp20	93	92.537	ENSORLG00020005879	utp20	73	92.537	Oryzias_latipes_hni
ENSNBRG00000019464	utp20	92	94.030	ENSORLG00015002843	utp20	73	94.030	Oryzias_latipes_hsok
ENSNBRG00000019464	utp20	96	89.706	ENSOMEG00000023583	utp20	79	89.706	Oryzias_melastigma
ENSNBRG00000019464	utp20	98	76.562	ENSOGAG00000015130	UTP20	81	75.385	Otolemur_garnettii
ENSNBRG00000019464	utp20	99	75.385	ENSOARG00000014722	UTP20	81	75.385	Ovis_aries
ENSNBRG00000019464	utp20	99	75.385	ENSPPAG00000001381	UTP20	82	75.385	Pan_paniscus
ENSNBRG00000019464	utp20	99	76.923	ENSPPRG00000001026	UTP20	80	76.923	Panthera_pardus
ENSNBRG00000019464	utp20	99	76.923	ENSPTIG00000020972	UTP20	80	76.923	Panthera_tigris_altaica
ENSNBRG00000019464	utp20	99	75.385	ENSPTRG00000005349	UTP20	82	75.385	Pan_troglodytes
ENSNBRG00000019464	utp20	99	75.385	ENSPANG00000020388	UTP20	82	75.385	Papio_anubis
ENSNBRG00000019464	utp20	99	85.075	ENSPKIG00000007196	utp20	81	85.075	Paramormyrops_kingsleyae
ENSNBRG00000019464	utp20	97	60.305	ENSPSIG00000016689	UTP20	84	59.456	Pelodiscus_sinensis
ENSNBRG00000019464	utp20	99	94.030	ENSPMGG00000004066	utp20	80	94.030	Periophthalmus_magnuspinnatus
ENSNBRG00000019464	utp20	99	73.846	ENSPEMG00000024120	Utp20	81	73.846	Peromyscus_maniculatus_bairdii
ENSNBRG00000019464	utp20	55	48.382	ENSPMAG00000003948	-	99	48.898	Petromyzon_marinus
ENSNBRG00000019464	utp20	99	76.923	ENSPCIG00000009298	UTP20	81	76.923	Phascolarctos_cinereus
ENSNBRG00000019464	utp20	98	81.337	ENSPFOG00000003312	utp20	85	81.362	Poecilia_formosa
ENSNBRG00000019464	utp20	96	94.030	ENSPLAG00000012874	utp20	79	94.030	Poecilia_latipinna
ENSNBRG00000019464	utp20	96	94.030	ENSPMEG00000005915	utp20	79	94.030	Poecilia_mexicana
ENSNBRG00000019464	utp20	96	93.939	ENSPREG00000013285	utp20	79	93.939	Poecilia_reticulata
ENSNBRG00000019464	utp20	83	82.353	ENSPPYG00000004871	UTP20	79	80.769	Pongo_abelii
ENSNBRG00000019464	utp20	74	71.717	ENSPCAG00000012791	UTP20	60	71.717	Procavia_capensis
ENSNBRG00000019464	utp20	99	75.385	ENSPCOG00000024948	UTP20	80	75.385	Propithecus_coquereli
ENSNBRG00000019464	utp20	99	75.385	ENSPVAG00000008113	UTP20	78	75.385	Pteropus_vampyrus
ENSNBRG00000019464	utp20	99	98.507	ENSPNYG00000011561	utp20	80	98.507	Pundamilia_nyererei
ENSNBRG00000019464	utp20	96	83.333	ENSPNAG00000006176	utp20	72	83.333	Pygocentrus_nattereri
ENSNBRG00000019464	utp20	99	72.308	ENSRNOG00000005823	Utp20	80	72.308	Rattus_norvegicus
ENSNBRG00000019464	utp20	99	75.385	ENSRBIG00000025384	UTP20	83	75.385	Rhinopithecus_bieti
ENSNBRG00000019464	utp20	99	75.385	ENSRROG00000041254	UTP20	83	75.385	Rhinopithecus_roxellana
ENSNBRG00000019464	utp20	99	73.846	ENSSBOG00000035762	UTP20	80	73.846	Saimiri_boliviensis_boliviensis
ENSNBRG00000019464	utp20	93	77.358	ENSSHAG00000002298	UTP20	73	75.926	Sarcophilus_harrisii
ENSNBRG00000019464	utp20	98	87.500	ENSSFOG00015001674	utp20	79	86.154	Scleropages_formosus
ENSNBRG00000019464	utp20	96	92.754	ENSSMAG00000016460	utp20	82	92.754	Scophthalmus_maximus
ENSNBRG00000019464	utp20	99	97.015	ENSSDUG00000013730	utp20	80	97.015	Seriola_dumerili
ENSNBRG00000019464	utp20	99	97.015	ENSSLDG00000012844	utp20	80	97.015	Seriola_lalandi_dorsalis
ENSNBRG00000019464	utp20	97	82.000	ENSSPUG00000004513	UTP20	81	82.000	Sphenodon_punctatus
ENSNBRG00000019464	utp20	99	94.030	ENSSPAG00000014674	utp20	80	94.030	Stegastes_partitus
ENSNBRG00000019464	utp20	99	75.385	ENSSSCG00000000869	UTP20	81	75.385	Sus_scrofa
ENSNBRG00000019464	utp20	70	75.000	ENSTGUG00000009053	-	77	75.000	Taeniopygia_guttata
ENSNBRG00000019464	utp20	99	93.750	ENSTRUG00000005849	utp20	81	93.750	Takifugu_rubripes
ENSNBRG00000019464	utp20	99	93.750	ENSTNIG00000006921	utp20	80	92.308	Tetraodon_nigroviridis
ENSNBRG00000019464	utp20	86	81.481	ENSTBEG00000011917	UTP20	70	52.510	Tupaia_belangeri
ENSNBRG00000019464	utp20	96	82.000	ENSTTRG00000017195	UTP20	79	82.000	Tursiops_truncatus
ENSNBRG00000019464	utp20	99	75.385	ENSUAMG00000016363	UTP20	82	75.385	Ursus_americanus
ENSNBRG00000019464	utp20	99	75.385	ENSUMAG00000000077	UTP20	81	75.385	Ursus_maritimus
ENSNBRG00000019464	utp20	91	57.964	ENSVPAG00000011620	UTP20	76	56.650	Vicugna_pacos
ENSNBRG00000019464	utp20	98	75.000	ENSVVUG00000018110	UTP20	82	75.000	Vulpes_vulpes
ENSNBRG00000019464	utp20	98	68.750	ENSXETG00000032346	UTP20	83	68.750	Xenopus_tropicalis
ENSNBRG00000019464	utp20	96	91.045	ENSXMAG00000006503	utp20	79	91.045	Xiphophorus_maculatus