EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000019550 (Gene tree)
Gene ID: 102781234
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 8302 bases
Position: chrJH422281.1:1974465-1982766
Accession: 102781234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025613	zf-C2H2	PF00096.26	4.7e-28	1	5
ENSNBRP00000025613	zf-C2H2	PF00096.26	4.7e-28	2	5
ENSNBRP00000025613	zf-C2H2	PF00096.26	4.7e-28	3	5
ENSNBRP00000025613	zf-C2H2	PF00096.26	4.7e-28	4	5
ENSNBRP00000025613	zf-C2H2	PF00096.26	4.7e-28	5	5
ENSNBRP00000025613	zf-met	PF12874.7	5.5e-11	1	2
ENSNBRP00000025613	zf-met	PF12874.7	5.5e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026283	-	2565	XM_006785281	ENSNBRP00000025613	854 (aa)	XP_006785344	-

Gene Model

Click here to download ENSNBRG00000019550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000019550	znf341	50	37.349	ENSNBRG00000020159	znf526	88	37.349
ENSNBRG00000019550	znf341	50	32.961	ENSNBRG00000024066	-	81	32.386
ENSNBRG00000019550	znf341	51	34.677	ENSNBRG00000007311	-	80	34.677
ENSNBRG00000019550	znf341	50	31.944	ENSNBRG00000000321	-	86	31.944
ENSNBRG00000019550	znf341	52	45.238	ENSNBRG00000015873	-	93	37.037
ENSNBRG00000019550	znf341	52	31.164	ENSNBRG00000016282	-	92	32.215
ENSNBRG00000019550	znf341	52	30.233	ENSNBRG00000004523	-	95	30.233
ENSNBRG00000019550	znf341	53	30.992	ENSNBRG00000024046	-	53	30.769
ENSNBRG00000019550	znf341	52	33.333	ENSNBRG00000008123	-	80	33.333
ENSNBRG00000019550	znf341	55	35.057	ENSNBRG00000003250	-	86	36.620
ENSNBRG00000019550	znf341	50	32.432	ENSNBRG00000005805	-	94	32.432
ENSNBRG00000019550	znf341	52	37.097	ENSNBRG00000013501	-	99	37.097
ENSNBRG00000019550	znf341	51	33.516	ENSNBRG00000001163	-	80	34.615
ENSNBRG00000019550	znf341	52	41.509	ENSNBRG00000002902	-	89	41.509
ENSNBRG00000019550	znf341	55	31.527	ENSNBRG00000008106	-	93	32.642
ENSNBRG00000019550	znf341	50	46.000	ENSNBRG00000004822	-	53	43.860
ENSNBRG00000019550	znf341	51	32.212	ENSNBRG00000023229	-	79	44.000
ENSNBRG00000019550	znf341	52	37.143	ENSNBRG00000008223	-	68	46.000
ENSNBRG00000019550	znf341	53	31.250	ENSNBRG00000024054	-	58	31.250
ENSNBRG00000019550	znf341	51	35.789	ENSNBRG00000013583	-	94	35.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019550	znf341	100	78.762	ENSAPOG00000016509	znf341	100	71.809	Acanthochromis_polyacanthus
ENSNBRG00000019550	znf341	100	81.352	ENSACIG00000016180	znf341	100	81.469	Amphilophus_citrinellus
ENSNBRG00000019550	znf341	100	78.082	ENSAPEG00000006358	znf341	100	79.008	Amphiprion_percula
ENSNBRG00000019550	znf341	100	76.338	ENSATEG00000003196	znf341	100	71.092	Anabas_testudineus
ENSNBRG00000019550	znf341	100	91.347	ENSACLG00000014349	znf341	100	91.347	Astatotilapia_calliptera
ENSNBRG00000019550	znf341	87	70.210	ENSAMXG00000016921	znf341	99	64.411	Astyanax_mexicanus
ENSNBRG00000019550	znf341	99	70.726	ENSCSEG00000003536	znf341	99	70.960	Cynoglossus_semilaevis
ENSNBRG00000019550	znf341	99	70.220	ENSCVAG00000016325	znf341	100	69.011	Cyprinodon_variegatus
ENSNBRG00000019550	znf341	58	71.098	ENSDARG00000103725	znf341	98	63.799	Danio_rerio
ENSNBRG00000019550	znf341	88	79.947	ENSELUG00000018438	znf341	99	70.853	Esox_lucius
ENSNBRG00000019550	znf341	100	65.194	ENSFHEG00000009763	znf341	99	71.574	Fundulus_heteroclitus
ENSNBRG00000019550	znf341	100	72.489	ENSGAFG00000020131	znf341	100	65.401	Gambusia_affinis
ENSNBRG00000019550	znf341	100	89.595	ENSHBUG00000012828	znf341	100	91.457	Haplochromis_burtoni
ENSNBRG00000019550	znf341	96	76.071	ENSHCOG00000004879	znf341	99	75.357	Hippocampus_comes
ENSNBRG00000019550	znf341	92	66.790	ENSIPUG00000002075	znf341	99	61.921	Ictalurus_punctatus
ENSNBRG00000019550	znf341	100	73.419	ENSKMAG00000006686	znf341	100	66.310	Kryptolebias_marmoratus
ENSNBRG00000019550	znf341	95	68.038	ENSLOCG00000000947	znf341	94	70.149	Lepisosteus_oculatus
ENSNBRG00000019550	znf341	100	75.261	ENSMAMG00000008000	znf341	100	75.494	Mastacembelus_armatus
ENSNBRG00000019550	znf341	100	91.347	ENSMZEG00005021851	znf341	100	91.347	Maylandia_zebra
ENSNBRG00000019550	znf341	87	77.188	ENSMMOG00000019626	znf341	93	91.304	Mola_mola
ENSNBRG00000019550	znf341	85	59.603	ENSMODG00000002856	ZNF341	87	58.808	Monodelphis_domestica
ENSNBRG00000019550	znf341	87	82.603	ENSMALG00000006492	znf341	97	82.478	Monopterus_albus
ENSNBRG00000019550	znf341	100	88.768	ENSONIG00000009210	znf341	100	89.422	Oreochromis_niloticus
ENSNBRG00000019550	znf341	96	72.029	ENSORLG00000000956	znf341	99	69.757	Oryzias_latipes
ENSNBRG00000019550	znf341	89	84.286	ENSORLG00020004162	znf341	95	74.769	Oryzias_latipes_hni
ENSNBRG00000019550	znf341	100	71.296	ENSORLG00015018360	znf341	100	70.336	Oryzias_latipes_hsok
ENSNBRG00000019550	znf341	100	71.753	ENSOMEG00000014403	znf341	100	65.439	Oryzias_melastigma
ENSNBRG00000019550	znf341	98	67.209	ENSPKIG00000023946	znf341	87	72.170	Paramormyrops_kingsleyae
ENSNBRG00000019550	znf341	100	69.338	ENSPMGG00000014849	znf341	100	68.873	Periophthalmus_magnuspinnatus
ENSNBRG00000019550	znf341	100	71.212	ENSPFOG00000013875	znf341	100	73.317	Poecilia_formosa
ENSNBRG00000019550	znf341	100	71.212	ENSPLAG00000014192	znf341	100	70.652	Poecilia_latipinna
ENSNBRG00000019550	znf341	100	70.950	ENSPMEG00000020155	znf341	100	69.957	Poecilia_mexicana
ENSNBRG00000019550	znf341	100	71.273	ENSPREG00000001388	znf341	100	69.859	Poecilia_reticulata
ENSNBRG00000019550	znf341	100	89.977	ENSPNYG00000015106	znf341	100	89.747	Pundamilia_nyererei
ENSNBRG00000019550	znf341	84	72.565	ENSPNAG00000027229	znf341	97	66.229	Pygocentrus_nattereri
ENSNBRG00000019550	znf341	86	73.026	ENSSFOG00015014678	znf341	95	65.731	Scleropages_formosus
ENSNBRG00000019550	znf341	100	78.959	ENSSMAG00000006473	znf341	52	76.854	Scophthalmus_maximus
ENSNBRG00000019550	znf341	100	78.579	ENSSDUG00000014540	znf341	100	79.030	Seriola_dumerili
ENSNBRG00000019550	znf341	100	79.615	ENSSLDG00000019660	znf341	100	79.841	Seriola_lalandi_dorsalis
ENSNBRG00000019550	znf341	96	74.086	ENSTRUG00000011385	znf341	100	69.546	Takifugu_rubripes
ENSNBRG00000019550	znf341	85	81.092	ENSTNIG00000005051	znf341	100	79.494	Tetraodon_nigroviridis
ENSNBRG00000019550	znf341	73	78.793	ENSXCOG00000000036	znf341	89	77.607	Xiphophorus_couchianus
ENSNBRG00000019550	znf341	100	72.391	ENSXMAG00000014133	znf341	100	71.522	Xiphophorus_maculatus