EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019581 (Gene tree)
Gene ID: 102779364
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: DNA damage-binding protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 54433 bases
Position: chrJH422303.1:3042129-3096561
Accession: 102779364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025658	CPSF_A	PF03178.15	8e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026328	-	4244	XM_006793817	ENSNBRP00000025658	1140 (aa)	XP_006793880	UPI0003EBC7AF

Gene Model

Click here to download ENSNBRG00000019581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019581	ddb1	100	91.491	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSNBRG00000019581	ddb1	98	98.654	ENSAPOG00000005036	ddb1	99	98.673	Acanthochromis_polyacanthus
ENSNBRG00000019581	ddb1	100	91.579	ENSAMEG00000016518	DDB1	100	91.579	Ailuropoda_melanoleuca
ENSNBRG00000019581	ddb1	86	99.184	ENSACIG00000020624	ddb1	99	99.184	Amphilophus_citrinellus
ENSNBRG00000019581	ddb1	100	98.684	ENSAOCG00000003066	ddb1	100	98.684	Amphiprion_ocellaris
ENSNBRG00000019581	ddb1	100	98.684	ENSAPEG00000000092	ddb1	100	98.684	Amphiprion_percula
ENSNBRG00000019581	ddb1	94	98.698	ENSATEG00000020571	ddb1	97	98.698	Anabas_testudineus
ENSNBRG00000019581	ddb1	99	90.000	ENSAPLG00000007174	DDB1	99	90.000	Anas_platyrhynchos
ENSNBRG00000019581	ddb1	100	90.965	ENSACAG00000017758	DDB1	100	90.965	Anolis_carolinensis
ENSNBRG00000019581	ddb1	100	91.491	ENSANAG00000021878	DDB1	100	91.491	Aotus_nancymaae
ENSNBRG00000019581	ddb1	100	99.912	ENSACLG00000012401	ddb1	100	99.912	Astatotilapia_calliptera
ENSNBRG00000019581	ddb1	100	91.491	ENSBTAG00000021569	DDB1	93	91.491	Bos_taurus
ENSNBRG00000019581	ddb1	100	36.955	WBGene00010890	ddb-1	100	36.955	Caenorhabditis_elegans
ENSNBRG00000019581	ddb1	100	91.491	ENSCJAG00000019319	DDB1	100	91.491	Callithrix_jacchus
ENSNBRG00000019581	ddb1	100	91.579	ENSCAFG00000016264	DDB1	100	91.579	Canis_familiaris
ENSNBRG00000019581	ddb1	94	91.814	ENSCAFG00020012722	DDB1	99	91.814	Canis_lupus_dingo
ENSNBRG00000019581	ddb1	100	91.491	ENSCHIG00000014969	DDB1	100	91.491	Capra_hircus
ENSNBRG00000019581	ddb1	100	91.140	ENSTSYG00000008027	DDB1	100	91.140	Carlito_syrichta
ENSNBRG00000019581	ddb1	98	91.421	ENSCAPG00000010786	DDB1	100	91.421	Cavia_aperea
ENSNBRG00000019581	ddb1	100	91.404	ENSCPOG00000009956	DDB1	100	91.404	Cavia_porcellus
ENSNBRG00000019581	ddb1	100	91.491	ENSCCAG00000035883	DDB1	100	91.491	Cebus_capucinus
ENSNBRG00000019581	ddb1	100	89.062	ENSCATG00000044495	DDB1	100	89.062	Cercocebus_atys
ENSNBRG00000019581	ddb1	100	91.491	ENSCLAG00000004126	DDB1	100	91.491	Chinchilla_lanigera
ENSNBRG00000019581	ddb1	100	91.491	ENSCSAG00000006392	DDB1	100	91.491	Chlorocebus_sabaeus
ENSNBRG00000019581	ddb1	88	85.227	ENSCHOG00000011377	DDB1	90	85.227	Choloepus_hoffmanni
ENSNBRG00000019581	ddb1	100	91.316	ENSCPBG00000017728	DDB1	100	91.316	Chrysemys_picta_bellii
ENSNBRG00000019581	ddb1	100	61.545	ENSCING00000007437	-	100	61.545	Ciona_intestinalis
ENSNBRG00000019581	ddb1	94	60.645	ENSCSAVG00000004783	-	100	60.645	Ciona_savignyi
ENSNBRG00000019581	ddb1	100	91.491	ENSCANG00000019948	DDB1	100	91.491	Colobus_angolensis_palliatus
ENSNBRG00000019581	ddb1	100	91.579	ENSCGRG00001016599	Ddb1	100	91.579	Cricetulus_griseus_chok1gshd
ENSNBRG00000019581	ddb1	100	91.579	ENSCGRG00000013427	Ddb1	100	91.579	Cricetulus_griseus_crigri
ENSNBRG00000019581	ddb1	93	98.021	ENSCSEG00000012499	ddb1	99	96.356	Cynoglossus_semilaevis
ENSNBRG00000019581	ddb1	94	97.670	ENSCVAG00000019531	ddb1	99	97.670	Cyprinodon_variegatus
ENSNBRG00000019581	ddb1	100	92.557	ENSDARG00000074431	ddb1	100	92.557	Danio_rerio
ENSNBRG00000019581	ddb1	94	91.814	ENSDNOG00000014884	DDB1	97	91.814	Dasypus_novemcinctus
ENSNBRG00000019581	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSNBRG00000019581	ddb1	77	30.065	FBgn0024698	Cpsf160	67	30.065	Drosophila_melanogaster
ENSNBRG00000019581	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSNBRG00000019581	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSNBRG00000019581	ddb1	78	83.802	ENSEBUG00000014593	ddb1	97	83.802	Eptatretus_burgeri
ENSNBRG00000019581	ddb1	100	91.579	ENSEASG00005008184	DDB1	100	91.579	Equus_asinus_asinus
ENSNBRG00000019581	ddb1	100	91.579	ENSECAG00000012136	DDB1	100	91.579	Equus_caballus
ENSNBRG00000019581	ddb1	85	87.879	ENSEEUG00000003194	DDB1	85	87.879	Erinaceus_europaeus
ENSNBRG00000019581	ddb1	100	97.105	ENSELUG00000023868	ddb1	100	97.105	Esox_lucius
ENSNBRG00000019581	ddb1	100	91.579	ENSFCAG00000029716	DDB1	100	91.579	Felis_catus
ENSNBRG00000019581	ddb1	100	90.726	ENSFALG00000011981	DDB1	100	90.726	Ficedula_albicollis
ENSNBRG00000019581	ddb1	100	91.491	ENSFDAG00000005128	DDB1	100	91.491	Fukomys_damarensis
ENSNBRG00000019581	ddb1	90	96.774	ENSFHEG00000022133	ddb1	99	96.774	Fundulus_heteroclitus
ENSNBRG00000019581	ddb1	79	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSNBRG00000019581	ddb1	100	91.140	ENSGALG00000042333	DDB1	100	91.140	Gallus_gallus
ENSNBRG00000019581	ddb1	94	98.043	ENSGAFG00000013142	ddb1	99	98.043	Gambusia_affinis
ENSNBRG00000019581	ddb1	96	97.250	ENSGACG00000017182	ddb1	100	97.250	Gasterosteus_aculeatus
ENSNBRG00000019581	ddb1	95	91.144	ENSGAGG00000014124	DDB1	100	91.144	Gopherus_agassizii
ENSNBRG00000019581	ddb1	100	91.491	ENSGGOG00000004052	DDB1	100	91.491	Gorilla_gorilla
ENSNBRG00000019581	ddb1	100	99.912	ENSHBUG00000008873	ddb1	100	99.912	Haplochromis_burtoni
ENSNBRG00000019581	ddb1	100	91.404	ENSHGLG00000018430	DDB1	100	91.404	Heterocephalus_glaber_female
ENSNBRG00000019581	ddb1	100	90.439	ENSHGLG00100014475	DDB1	100	90.439	Heterocephalus_glaber_male
ENSNBRG00000019581	ddb1	94	98.048	ENSHCOG00000018670	ddb1	98	98.048	Hippocampus_comes
ENSNBRG00000019581	ddb1	100	96.053	ENSIPUG00000005612	DDB1	100	96.053	Ictalurus_punctatus
ENSNBRG00000019581	ddb1	100	91.491	ENSSTOG00000007552	DDB1	100	91.491	Ictidomys_tridecemlineatus
ENSNBRG00000019581	ddb1	100	91.404	ENSJJAG00000017769	Ddb1	100	91.404	Jaculus_jaculus
ENSNBRG00000019581	ddb1	94	98.136	ENSKMAG00000002315	ddb1	99	98.136	Kryptolebias_marmoratus
ENSNBRG00000019581	ddb1	84	98.855	ENSLBEG00000017065	ddb1	99	98.855	Labrus_bergylta
ENSNBRG00000019581	ddb1	100	91.068	ENSLACG00000017611	DDB1	100	91.068	Latimeria_chalumnae
ENSNBRG00000019581	ddb1	92	87.784	ENSLOCG00000000012	ddb1	100	87.784	Lepisosteus_oculatus
ENSNBRG00000019581	ddb1	100	91.404	ENSLAFG00000011513	DDB1	100	91.404	Loxodonta_africana
ENSNBRG00000019581	ddb1	100	91.491	ENSMFAG00000042035	DDB1	100	91.491	Macaca_fascicularis
ENSNBRG00000019581	ddb1	99	91.512	ENSMMUG00000002691	DDB1	99	91.512	Macaca_mulatta
ENSNBRG00000019581	ddb1	100	91.491	ENSMNEG00000031559	DDB1	100	91.491	Macaca_nemestrina
ENSNBRG00000019581	ddb1	100	91.491	ENSMLEG00000044136	DDB1	100	91.491	Mandrillus_leucophaeus
ENSNBRG00000019581	ddb1	100	99.123	ENSMAMG00000014372	ddb1	100	99.123	Mastacembelus_armatus
ENSNBRG00000019581	ddb1	100	99.825	ENSMZEG00005013835	ddb1	100	99.825	Maylandia_zebra
ENSNBRG00000019581	ddb1	94	90.410	ENSMGAG00000004990	DDB1	100	90.410	Meleagris_gallopavo
ENSNBRG00000019581	ddb1	100	91.579	ENSMAUG00000012926	Ddb1	100	91.579	Mesocricetus_auratus
ENSNBRG00000019581	ddb1	100	91.667	ENSMICG00000013703	DDB1	100	91.667	Microcebus_murinus
ENSNBRG00000019581	ddb1	100	91.404	ENSMOCG00000020499	Ddb1	100	91.404	Microtus_ochrogaster
ENSNBRG00000019581	ddb1	86	98.980	ENSMMOG00000001758	ddb1	99	98.980	Mola_mola
ENSNBRG00000019581	ddb1	100	82.699	ENSMODG00000020353	DDB1	100	82.699	Monodelphis_domestica
ENSNBRG00000019581	ddb1	100	99.035	ENSMALG00000014071	ddb1	100	99.035	Monopterus_albus
ENSNBRG00000019581	ddb1	100	91.579	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.579	Mus_caroli
ENSNBRG00000019581	ddb1	100	91.667	ENSMUSG00000024740	Ddb1	100	91.667	Mus_musculus
ENSNBRG00000019581	ddb1	100	91.579	MGP_PahariEiJ_G0014189	Ddb1	100	91.579	Mus_pahari
ENSNBRG00000019581	ddb1	100	91.667	MGP_SPRETEiJ_G0023609	Ddb1	100	91.667	Mus_spretus
ENSNBRG00000019581	ddb1	100	88.421	ENSMPUG00000014200	DDB1	100	88.421	Mustela_putorius_furo
ENSNBRG00000019581	ddb1	100	91.667	ENSMLUG00000013232	DDB1	100	91.667	Myotis_lucifugus
ENSNBRG00000019581	ddb1	100	91.491	ENSNGAG00000009384	Ddb1	100	91.491	Nannospalax_galili
ENSNBRG00000019581	ddb1	100	88.628	ENSNLEG00000002022	DDB1	100	88.628	Nomascus_leucogenys
ENSNBRG00000019581	ddb1	90	94.014	ENSMEUG00000001099	DDB1	93	94.014	Notamacropus_eugenii
ENSNBRG00000019581	ddb1	90	82.929	ENSOPRG00000008254	DDB1	90	82.929	Ochotona_princeps
ENSNBRG00000019581	ddb1	100	91.579	ENSODEG00000002419	DDB1	100	91.579	Octodon_degus
ENSNBRG00000019581	ddb1	100	99.825	ENSONIG00000005804	ddb1	100	99.825	Oreochromis_niloticus
ENSNBRG00000019581	ddb1	91	91.376	ENSOANG00000004897	DDB1	100	91.376	Ornithorhynchus_anatinus
ENSNBRG00000019581	ddb1	100	91.491	ENSOCUG00000001667	DDB1	100	91.491	Oryctolagus_cuniculus
ENSNBRG00000019581	ddb1	96	96.425	ENSORLG00000001399	ddb1	98	97.695	Oryzias_latipes
ENSNBRG00000019581	ddb1	96	96.334	ENSORLG00020001277	ddb1	97	96.334	Oryzias_latipes_hni
ENSNBRG00000019581	ddb1	94	97.581	ENSORLG00015002080	ddb1	99	97.581	Oryzias_latipes_hsok
ENSNBRG00000019581	ddb1	96	96.080	ENSOMEG00000006181	ddb1	99	96.080	Oryzias_melastigma
ENSNBRG00000019581	ddb1	100	91.667	ENSOGAG00000016103	DDB1	100	91.667	Otolemur_garnettii
ENSNBRG00000019581	ddb1	99	91.719	ENSOARG00000011716	DDB1	98	91.719	Ovis_aries
ENSNBRG00000019581	ddb1	100	91.491	ENSPPAG00000035343	DDB1	100	91.491	Pan_paniscus
ENSNBRG00000019581	ddb1	100	91.579	ENSPPRG00000013300	DDB1	100	91.579	Panthera_pardus
ENSNBRG00000019581	ddb1	98	91.600	ENSPTIG00000006909	DDB1	98	91.600	Panthera_tigris_altaica
ENSNBRG00000019581	ddb1	100	91.491	ENSPTRG00000003737	DDB1	100	91.491	Pan_troglodytes
ENSNBRG00000019581	ddb1	100	91.491	ENSPANG00000000242	DDB1	100	91.491	Papio_anubis
ENSNBRG00000019581	ddb1	94	96.086	ENSPKIG00000019213	ddb1	94	96.086	Paramormyrops_kingsleyae
ENSNBRG00000019581	ddb1	98	90.747	ENSPSIG00000013275	DDB1	100	90.747	Pelodiscus_sinensis
ENSNBRG00000019581	ddb1	86	98.469	ENSPMGG00000021179	ddb1	99	98.469	Periophthalmus_magnuspinnatus
ENSNBRG00000019581	ddb1	100	91.579	ENSPEMG00000012241	Ddb1	100	91.579	Peromyscus_maniculatus_bairdii
ENSNBRG00000019581	ddb1	89	86.542	ENSPMAG00000008479	ddb1	100	86.542	Petromyzon_marinus
ENSNBRG00000019581	ddb1	100	91.754	ENSPCIG00000002643	DDB1	100	91.754	Phascolarctos_cinereus
ENSNBRG00000019581	ddb1	100	98.072	ENSPFOG00000002768	ddb1	100	98.072	Poecilia_formosa
ENSNBRG00000019581	ddb1	100	97.895	ENSPLAG00000017227	ddb1	100	97.895	Poecilia_latipinna
ENSNBRG00000019581	ddb1	100	97.895	ENSPMEG00000011398	ddb1	100	97.895	Poecilia_mexicana
ENSNBRG00000019581	ddb1	94	98.140	ENSPREG00000004440	ddb1	98	98.140	Poecilia_reticulata
ENSNBRG00000019581	ddb1	100	87.173	ENSPPYG00000003193	DDB1	100	87.173	Pongo_abelii
ENSNBRG00000019581	ddb1	85	89.552	ENSPCAG00000011040	DDB1	85	89.552	Procavia_capensis
ENSNBRG00000019581	ddb1	100	90.455	ENSPCOG00000015176	DDB1	100	90.455	Propithecus_coquereli
ENSNBRG00000019581	ddb1	100	91.404	ENSPVAG00000003847	DDB1	100	91.404	Pteropus_vampyrus
ENSNBRG00000019581	ddb1	94	96.459	ENSPNAG00000006635	ddb1	97	96.459	Pygocentrus_nattereri
ENSNBRG00000019581	ddb1	100	91.667	ENSRNOG00000020715	Ddb1	100	91.667	Rattus_norvegicus
ENSNBRG00000019581	ddb1	100	91.491	ENSRBIG00000033611	DDB1	100	91.491	Rhinopithecus_bieti
ENSNBRG00000019581	ddb1	100	91.491	ENSRROG00000041407	DDB1	100	91.491	Rhinopithecus_roxellana
ENSNBRG00000019581	ddb1	100	91.579	ENSSBOG00000019775	DDB1	100	91.579	Saimiri_boliviensis_boliviensis
ENSNBRG00000019581	ddb1	94	89.346	ENSSHAG00000011600	DDB1	100	89.346	Sarcophilus_harrisii
ENSNBRG00000019581	ddb1	94	96.283	ENSSFOG00015011151	ddb1	97	96.283	Scleropages_formosus
ENSNBRG00000019581	ddb1	100	98.509	ENSSMAG00000009495	ddb1	100	98.509	Scophthalmus_maximus
ENSNBRG00000019581	ddb1	100	98.947	ENSSDUG00000004642	ddb1	100	98.947	Seriola_dumerili
ENSNBRG00000019581	ddb1	100	98.947	ENSSLDG00000015804	ddb1	100	98.947	Seriola_lalandi_dorsalis
ENSNBRG00000019581	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSNBRG00000019581	ddb1	100	91.228	ENSSPUG00000019338	DDB1	100	91.228	Sphenodon_punctatus
ENSNBRG00000019581	ddb1	94	98.605	ENSSPAG00000009888	ddb1	99	98.605	Stegastes_partitus
ENSNBRG00000019581	ddb1	100	90.614	ENSSSCG00000013094	DDB1	100	90.614	Sus_scrofa
ENSNBRG00000019581	ddb1	100	90.789	ENSTGUG00000006414	DDB1	100	90.789	Taeniopygia_guttata
ENSNBRG00000019581	ddb1	94	97.018	ENSTRUG00000016682	ddb1	98	97.018	Takifugu_rubripes
ENSNBRG00000019581	ddb1	88	92.615	ENSTNIG00000009565	ddb1	99	92.615	Tetraodon_nigroviridis
ENSNBRG00000019581	ddb1	92	85.901	ENSTTRG00000011055	DDB1	94	85.901	Tursiops_truncatus
ENSNBRG00000019581	ddb1	94	91.814	ENSUAMG00000017793	DDB1	93	91.814	Ursus_americanus
ENSNBRG00000019581	ddb1	94	91.814	ENSUMAG00000011788	DDB1	98	91.814	Ursus_maritimus
ENSNBRG00000019581	ddb1	90	86.891	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSNBRG00000019581	ddb1	100	91.579	ENSVVUG00000004987	DDB1	100	91.579	Vulpes_vulpes
ENSNBRG00000019581	ddb1	100	88.724	ENSXETG00000008820	ddb1	100	88.724	Xenopus_tropicalis
ENSNBRG00000019581	ddb1	86	98.265	ENSXCOG00000013956	ddb1	99	98.265	Xiphophorus_couchianus
ENSNBRG00000019581	ddb1	94	98.043	ENSXMAG00000000022	ddb1	99	98.043	Xiphophorus_maculatus