EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019684 (Gene tree)
Gene ID: -
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interactive domain-containing protein 4B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 22048 bases
Position: chrJH422469.1:182394-204441
Accession: 102789854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025852	Tudor-knot	PF11717.8	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026497	-	3054	-	ENSNBRP00000025818	1017 (aa)	-	-
ENSNBRT00000026530	-	3492	XM_006807655	ENSNBRP00000025852	1163 (aa)	XP_006807718	-

Gene Model

Click here to download ENSNBRG00000019684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019684	tomm20a	98	73.479	ENSG00000054267	ARID4B	89	73.479	Homo_sapiens
ENSNBRG00000019684	tomm20a	100	92.217	ENSAPOG00000010823	tomm20a	93	89.858	Acanthochromis_polyacanthus
ENSNBRG00000019684	tomm20a	98	73.786	ENSAMEG00000008801	ARID4B	89	73.786	Ailuropoda_melanoleuca
ENSNBRG00000019684	tomm20a	100	92.426	ENSACIG00000006313	tomm20a	100	92.596	Amphilophus_citrinellus
ENSNBRG00000019684	tomm20a	100	91.745	ENSAOCG00000003330	tomm20a	93	89.387	Amphiprion_ocellaris
ENSNBRG00000019684	tomm20a	100	91.745	ENSAPEG00000024018	tomm20a	93	89.387	Amphiprion_percula
ENSNBRG00000019684	tomm20a	100	90.802	ENSATEG00000014930	tomm20a	93	88.443	Anabas_testudineus
ENSNBRG00000019684	tomm20a	98	72.902	ENSAPLG00000004422	ARID4B	86	72.902	Anas_platyrhynchos
ENSNBRG00000019684	tomm20a	73	71.230	ENSACAG00000001289	ARID4B	88	72.447	Anolis_carolinensis
ENSNBRG00000019684	tomm20a	100	95.185	ENSACLG00000023521	tomm20a	100	95.185	Astatotilapia_calliptera
ENSNBRG00000019684	tomm20a	95	73.427	ENSAMXG00000003657	tomm20a	92	74.447	Astyanax_mexicanus
ENSNBRG00000019684	tomm20a	98	73.723	ENSBTAG00000000222	ARID4B	89	73.723	Bos_taurus
ENSNBRG00000019684	tomm20a	97	69.212	ENSCHIG00000020742	ARID4B	88	69.212	Capra_hircus
ENSNBRG00000019684	tomm20a	98	73.966	ENSCPOG00000034766	ARID4B	88	73.966	Cavia_porcellus
ENSNBRG00000019684	tomm20a	63	46.049	ENSCATG00000042166	ARID4B	57	46.096	Cercocebus_atys
ENSNBRG00000019684	tomm20a	98	73.723	ENSCLAG00000003255	ARID4B	88	73.723	Chinchilla_lanigera
ENSNBRG00000019684	tomm20a	98	73.479	ENSCSAG00000010069	ARID4B	88	73.479	Chlorocebus_sabaeus
ENSNBRG00000019684	tomm20a	72	70.905	ENSCPBG00000004501	ARID4B	90	69.492	Chrysemys_picta_bellii
ENSNBRG00000019684	tomm20a	98	68.780	ENSCANG00000027498	ARID4B	88	68.293	Colobus_angolensis_palliatus
ENSNBRG00000019684	tomm20a	98	73.966	ENSCGRG00001014397	Arid4b	89	73.966	Cricetulus_griseus_chok1gshd
ENSNBRG00000019684	tomm20a	98	73.966	ENSCGRG00000004910	Arid4b	89	73.966	Cricetulus_griseus_crigri
ENSNBRG00000019684	tomm20a	98	87.621	ENSCSEG00000012928	tomm20a	92	84.434	Cynoglossus_semilaevis
ENSNBRG00000019684	tomm20a	100	89.623	ENSCVAG00000003244	tomm20a	96	82.276	Cyprinodon_variegatus
ENSNBRG00000019684	tomm20a	99	82.742	ENSDARG00000090656	tomm20a	90	82.033	Danio_rerio
ENSNBRG00000019684	tomm20a	98	74.209	ENSDORG00000006422	Arid4b	87	74.209	Dipodomys_ordii
ENSNBRG00000019684	tomm20a	95	60.963	ENSETEG00000005596	ARID4B	87	60.963	Echinops_telfairi
ENSNBRG00000019684	tomm20a	67	75.576	ENSELUG00000018441	tomm20a	82	75.576	Esox_lucius
ENSNBRG00000019684	tomm20a	98	73.976	ENSFALG00000013548	ARID4B	85	73.253	Ficedula_albicollis
ENSNBRG00000019684	tomm20a	100	89.882	ENSFHEG00000003798	tomm20a	93	87.294	Fundulus_heteroclitus
ENSNBRG00000019684	tomm20a	88	85.230	ENSGMOG00000018747	tomm20a	85	83.962	Gadus_morhua
ENSNBRG00000019684	tomm20a	100	86.353	ENSGACG00000004298	tomm20a	93	84.941	Gasterosteus_aculeatus
ENSNBRG00000019684	tomm20a	98	70.460	ENSGAGG00000020544	ARID4B	90	69.492	Gopherus_agassizii
ENSNBRG00000019684	tomm20a	100	96.934	ENSHBUG00000020369	tomm20a	94	96.934	Haplochromis_burtoni
ENSNBRG00000019684	tomm20a	98	73.479	ENSHGLG00000012546	ARID4B	88	73.479	Heterocephalus_glaber_female
ENSNBRG00000019684	tomm20a	98	73.479	ENSHGLG00100015436	ARID4B	88	73.479	Heterocephalus_glaber_male
ENSNBRG00000019684	tomm20a	100	76.427	ENSHCOG00000010376	tomm20a	100	76.261	Hippocampus_comes
ENSNBRG00000019684	tomm20a	99	81.311	ENSIPUG00000014234	arid4b	90	80.825	Ictalurus_punctatus
ENSNBRG00000019684	tomm20a	98	74.453	ENSSTOG00000002810	ARID4B	88	74.453	Ictidomys_tridecemlineatus
ENSNBRG00000019684	tomm20a	93	92.593	ENSKMAG00000010987	tomm20a	98	78.302	Kryptolebias_marmoratus
ENSNBRG00000019684	tomm20a	100	73.193	ENSLOCG00000015899	tomm20a	93	73.474	Lepisosteus_oculatus
ENSNBRG00000019684	tomm20a	98	73.479	ENSMFAG00000044016	ARID4B	88	73.479	Macaca_fascicularis
ENSNBRG00000019684	tomm20a	98	73.479	ENSMMUG00000007141	ARID4B	88	73.479	Macaca_mulatta
ENSNBRG00000019684	tomm20a	98	73.479	ENSMNEG00000014840	ARID4B	88	73.479	Macaca_nemestrina
ENSNBRG00000019684	tomm20a	97	73.464	ENSMLEG00000033583	ARID4B	88	73.464	Mandrillus_leucophaeus
ENSNBRG00000019684	tomm20a	92	91.038	ENSMAMG00000017134	tomm20a	93	88.443	Mastacembelus_armatus
ENSNBRG00000019684	tomm20a	100	96.698	ENSMZEG00005009879	tomm20a	94	96.698	Maylandia_zebra
ENSNBRG00000019684	tomm20a	98	82.185	ENSMMOG00000000561	tomm20a	98	80.605	Mola_mola
ENSNBRG00000019684	tomm20a	98	73.012	ENSMODG00000008417	ARID4B	89	73.012	Monodelphis_domestica
ENSNBRG00000019684	tomm20a	100	90.566	ENSMALG00000005205	tomm20a	93	87.736	Monopterus_albus
ENSNBRG00000019684	tomm20a	98	73.236	ENSMUSG00000039219	Arid4b	88	73.236	Mus_musculus
ENSNBRG00000019684	tomm20a	98	73.723	MGP_PahariEiJ_G0019286	Arid4b	88	73.723	Mus_pahari
ENSNBRG00000019684	tomm20a	98	73.236	MGP_SPRETEiJ_G0019094	Arid4b	88	73.236	Mus_spretus
ENSNBRG00000019684	tomm20a	98	73.723	ENSMPUG00000002906	ARID4B	88	73.723	Mustela_putorius_furo
ENSNBRG00000019684	tomm20a	98	73.479	ENSNGAG00000014629	Arid4b	89	73.479	Nannospalax_galili
ENSNBRG00000019684	tomm20a	98	73.966	ENSODEG00000005373	ARID4B	87	73.966	Octodon_degus
ENSNBRG00000019684	tomm20a	100	85.986	ENSORLG00000012510	tomm20a	93	84.798	Oryzias_latipes
ENSNBRG00000019684	tomm20a	100	77.534	ENSORLG00020013988	tomm20a	100	77.449	Oryzias_latipes_hni
ENSNBRG00000019684	tomm20a	100	77.731	ENSORLG00015022835	tomm20a	100	77.477	Oryzias_latipes_hsok
ENSNBRG00000019684	tomm20a	100	85.748	ENSOMEG00000000521	tomm20a	93	84.561	Oryzias_melastigma
ENSNBRG00000019684	tomm20a	96	73.544	ENSOARG00000003481	ARID4B	87	73.544	Ovis_aries
ENSNBRG00000019684	tomm20a	98	72.263	ENSPANG00000013611	ARID4B	88	72.263	Papio_anubis
ENSNBRG00000019684	tomm20a	91	70.462	ENSPSIG00000011632	ARID4B	86	68.485	Pelodiscus_sinensis
ENSNBRG00000019684	tomm20a	56	72.932	ENSPMGG00000001596	tomm20a	96	60.788	Periophthalmus_magnuspinnatus
ENSNBRG00000019684	tomm20a	98	73.494	ENSPCIG00000029756	ARID4B	90	73.494	Phascolarctos_cinereus
ENSNBRG00000019684	tomm20a	100	89.858	ENSPFOG00000019430	tomm20a	93	87.736	Poecilia_formosa
ENSNBRG00000019684	tomm20a	100	89.623	ENSPLAG00000010554	tomm20a	93	87.736	Poecilia_latipinna
ENSNBRG00000019684	tomm20a	100	86.192	ENSPMEG00000003093	tomm20a	93	84.855	Poecilia_mexicana
ENSNBRG00000019684	tomm20a	100	89.858	ENSPREG00000007996	tomm20a	93	87.736	Poecilia_reticulata
ENSNBRG00000019684	tomm20a	74	74.696	ENSPVAG00000015159	ARID4B	87	74.696	Pteropus_vampyrus
ENSNBRG00000019684	tomm20a	100	99.060	ENSPNYG00000013988	tomm20a	94	99.060	Pundamilia_nyererei
ENSNBRG00000019684	tomm20a	100	82.243	ENSPNAG00000000523	tomm20a	84	81.542	Pygocentrus_nattereri
ENSNBRG00000019684	tomm20a	84	67.339	ENSRNOG00000016391	LOC100912163	85	67.470	Rattus_norvegicus
ENSNBRG00000019684	tomm20a	97	71.078	ENSRBIG00000042029	ARID4B	85	71.078	Rhinopithecus_bieti
ENSNBRG00000019684	tomm20a	98	73.077	ENSSHAG00000015214	ARID4B	89	73.077	Sarcophilus_harrisii
ENSNBRG00000019684	tomm20a	71	87.097	ENSSFOG00015008923	tomm20a	86	87.097	Scleropages_formosus
ENSNBRG00000019684	tomm20a	99	79.254	ENSSFOG00015000132	arid4b	90	77.389	Scleropages_formosus
ENSNBRG00000019684	tomm20a	100	88.915	ENSSMAG00000010430	tomm20a	93	86.557	Scophthalmus_maximus
ENSNBRG00000019684	tomm20a	100	91.745	ENSSDUG00000003019	tomm20a	93	89.387	Seriola_dumerili
ENSNBRG00000019684	tomm20a	63	45.711	ENSSPUG00000015466	ARID4B	88	72.596	Sphenodon_punctatus
ENSNBRG00000019684	tomm20a	99	91.706	ENSSPAG00000007358	tomm20a	92	88.863	Stegastes_partitus
ENSNBRG00000019684	tomm20a	98	74.940	ENSTGUG00000010246	ARID4B	89	74.458	Taeniopygia_guttata
ENSNBRG00000019684	tomm20a	65	72.167	ENSTRUG00000002893	tomm20a	90	71.182	Takifugu_rubripes
ENSNBRG00000019684	tomm20a	75	66.184	ENSTBEG00000003961	ARID4B	66	64.976	Tupaia_belangeri
ENSNBRG00000019684	tomm20a	98	72.506	ENSTTRG00000002228	ARID4B	88	72.506	Tursiops_truncatus
ENSNBRG00000019684	tomm20a	96	71.392	ENSUMAG00000006905	ARID4B	89	71.392	Ursus_maritimus
ENSNBRG00000019684	tomm20a	66	70.805	ENSVPAG00000006841	ARID4B	55	73.236	Vicugna_pacos
ENSNBRG00000019684	tomm20a	100	68.675	ENSXETG00000024651	arid4b	76	67.470	Xenopus_tropicalis
ENSNBRG00000019684	tomm20a	100	90.094	ENSXMAG00000006538	tomm20a	93	87.972	Xiphophorus_maculatus