EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019702 (Gene tree)
Gene ID: 102792566
Gene Symbol: blm
Alias: -
Full Name: Bloom syndrome protein homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 8868 bases
Position: chrJH422288.1:2885206-2894073
Accession: 102792566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025793	HRDC	PF00570.23	8.3e-15	1	1
ENSNBRP00000025793	BDHCT	PF08072.11	9.2e-19	1	1
ENSNBRP00000025793	DEAD	PF00270.29	3.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026471	-	4146	XM_006789353	ENSNBRP00000025793	1381 (aa)	XP_006789416	-

Gene Model

Click here to download ENSNBRG00000019702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019702	blm	61	66.113	ENSG00000197299	BLM	82	75.258	Homo_sapiens
ENSNBRG00000019702	blm	100	74.264	ENSAPOG00000017966	blm	100	74.334	Acanthochromis_polyacanthus
ENSNBRG00000019702	blm	84	64.987	ENSAMEG00000013843	BLM	84	64.213	Ailuropoda_melanoleuca
ENSNBRG00000019702	blm	100	84.125	ENSACIG00000023762	blm	100	84.337	Amphilophus_citrinellus
ENSNBRG00000019702	blm	100	72.467	ENSAOCG00000003318	blm	100	72.816	Amphiprion_ocellaris
ENSNBRG00000019702	blm	100	74.354	ENSAPEG00000018105	blm	100	74.703	Amphiprion_percula
ENSNBRG00000019702	blm	99	75.053	ENSATEG00000006421	blm	100	74.912	Anabas_testudineus
ENSNBRG00000019702	blm	61	60.630	ENSAPLG00000006878	BLM	72	61.707	Anas_platyrhynchos
ENSNBRG00000019702	blm	60	66.156	ENSACAG00000014275	BLM	84	66.197	Anolis_carolinensis
ENSNBRG00000019702	blm	64	63.278	ENSANAG00000038415	BLM	87	69.815	Aotus_nancymaae
ENSNBRG00000019702	blm	100	93.914	ENSACLG00000020354	blm	100	93.064	Astatotilapia_calliptera
ENSNBRG00000019702	blm	99	56.513	ENSAMXG00000016970	blm	99	56.798	Astyanax_mexicanus
ENSNBRG00000019702	blm	57	80.217	ENSBTAG00000020301	BLM	86	72.706	Bos_taurus
ENSNBRG00000019702	blm	61	66.453	ENSCJAG00000009803	BLM	82	75.464	Callithrix_jacchus
ENSNBRG00000019702	blm	61	64.512	ENSCAFG00000012385	BLM	84	64.841	Canis_familiaris
ENSNBRG00000019702	blm	61	64.512	ENSCAFG00020016111	BLM	83	74.227	Canis_lupus_dingo
ENSNBRG00000019702	blm	60	80.217	ENSCHIG00000010329	BLM	86	72.706	Capra_hircus
ENSNBRG00000019702	blm	88	63.214	ENSTSYG00000012368	BLM	87	69.131	Carlito_syrichta
ENSNBRG00000019702	blm	51	71.920	ENSCAPG00000017976	BLM	58	71.920	Cavia_aperea
ENSNBRG00000019702	blm	69	62.156	ENSCPOG00000001761	BLM	88	62.156	Cavia_porcellus
ENSNBRG00000019702	blm	61	66.069	ENSCCAG00000023069	BLM	82	75.258	Cebus_capucinus
ENSNBRG00000019702	blm	61	66.240	ENSCATG00000040609	BLM	89	68.698	Cercocebus_atys
ENSNBRG00000019702	blm	75	63.145	ENSCLAG00000012111	BLM	88	63.145	Chinchilla_lanigera
ENSNBRG00000019702	blm	61	66.071	ENSCSAG00000017040	BLM	84	65.944	Chlorocebus_sabaeus
ENSNBRG00000019702	blm	53	60.185	ENSCHOG00000006255	BLM	77	60.185	Choloepus_hoffmanni
ENSNBRG00000019702	blm	80	54.401	ENSCPBG00000025000	BLM	99	53.180	Chrysemys_picta_bellii
ENSNBRG00000019702	blm	74	55.419	ENSCGRG00001024897	Blm	60	63.033	Cricetulus_griseus_chok1gshd
ENSNBRG00000019702	blm	93	67.671	ENSCSEG00000013483	blm	99	67.347	Cynoglossus_semilaevis
ENSNBRG00000019702	blm	70	78.977	ENSCVAG00000017583	blm	94	79.762	Cyprinodon_variegatus
ENSNBRG00000019702	blm	99	57.859	ENSDARG00000077089	blm	100	58.221	Danio_rerio
ENSNBRG00000019702	blm	65	64.204	ENSDNOG00000010159	BLM	84	64.512	Dasypus_novemcinctus
ENSNBRG00000019702	blm	74	54.911	ENSDORG00000011033	Blm	99	54.443	Dipodomys_ordii
ENSNBRG00000019702	blm	56	53.488	ENSETEG00000015019	BLM	62	53.488	Echinops_telfairi
ENSNBRG00000019702	blm	87	59.807	ENSEASG00005006727	BLM	88	59.569	Equus_asinus_asinus
ENSNBRG00000019702	blm	87	62.724	ENSECAG00000011405	BLM	87	62.945	Equus_caballus
ENSNBRG00000019702	blm	59	64.096	ENSEEUG00000001434	BLM	59	63.843	Erinaceus_europaeus
ENSNBRG00000019702	blm	99	59.635	ENSELUG00000019098	blm	99	59.364	Esox_lucius
ENSNBRG00000019702	blm	61	65.102	ENSFCAG00000006087	BLM	82	74.433	Felis_catus
ENSNBRG00000019702	blm	70	65.909	ENSFDAG00000012658	BLM	87	65.909	Fukomys_damarensis
ENSNBRG00000019702	blm	100	69.642	ENSFHEG00000002553	blm	100	69.361	Fundulus_heteroclitus
ENSNBRG00000019702	blm	99	59.123	ENSGMOG00000016431	blm	98	69.240	Gadus_morhua
ENSNBRG00000019702	blm	75	54.977	ENSGALG00000008256	BLM	58	64.384	Gallus_gallus
ENSNBRG00000019702	blm	100	69.761	ENSGAFG00000001117	blm	100	71.587	Gambusia_affinis
ENSNBRG00000019702	blm	99	68.632	ENSGACG00000010863	blm	100	88.447	Gasterosteus_aculeatus
ENSNBRG00000019702	blm	52	71.010	ENSGAGG00000005383	BLM	81	71.010	Gopherus_agassizii
ENSNBRG00000019702	blm	61	66.071	ENSGGOG00000007710	BLM	82	74.845	Gorilla_gorilla
ENSNBRG00000019702	blm	100	94.904	ENSHBUG00000015943	blm	100	94.904	Haplochromis_burtoni
ENSNBRG00000019702	blm	69	62.665	ENSHGLG00000013231	BLM	87	62.515	Heterocephalus_glaber_female
ENSNBRG00000019702	blm	74	71.017	ENSHCOG00000011455	blm	100	70.878	Hippocampus_comes
ENSNBRG00000019702	blm	75	63.776	ENSIPUG00000000529	blm	76	71.961	Ictalurus_punctatus
ENSNBRG00000019702	blm	56	65.429	ENSSTOG00000005000	BLM	84	65.390	Ictidomys_tridecemlineatus
ENSNBRG00000019702	blm	52	69.752	ENSJJAG00000016322	Blm	73	71.765	Jaculus_jaculus
ENSNBRG00000019702	blm	100	73.072	ENSKMAG00000016608	blm	100	73.001	Kryptolebias_marmoratus
ENSNBRG00000019702	blm	60	83.172	ENSLBEG00000018729	blm	96	83.516	Labrus_bergylta
ENSNBRG00000019702	blm	67	65.578	ENSLACG00000006490	BLM	88	65.574	Latimeria_chalumnae
ENSNBRG00000019702	blm	86	70.767	ENSLOCG00000014302	blm	85	70.352	Lepisosteus_oculatus
ENSNBRG00000019702	blm	61	66.240	ENSMFAG00000042982	BLM	82	75.258	Macaca_fascicularis
ENSNBRG00000019702	blm	61	66.240	ENSMMUG00000019526	BLM	82	75.258	Macaca_mulatta
ENSNBRG00000019702	blm	56	66.113	ENSMNEG00000031251	BLM	89	68.421	Macaca_nemestrina
ENSNBRG00000019702	blm	61	62.628	ENSMLEG00000032934	BLM	84	62.628	Mandrillus_leucophaeus
ENSNBRG00000019702	blm	99	72.669	ENSMAMG00000008726	blm	99	72.458	Mastacembelus_armatus
ENSNBRG00000019702	blm	100	95.422	ENSMZEG00005022323	blm	100	95.422	Maylandia_zebra
ENSNBRG00000019702	blm	88	62.441	ENSMAUG00000008953	Blm	88	62.692	Mesocricetus_auratus
ENSNBRG00000019702	blm	59	64.087	ENSMOCG00000016367	Blm	58	64.010	Microtus_ochrogaster
ENSNBRG00000019702	blm	100	71.809	ENSMMOG00000006959	blm	100	71.108	Mola_mola
ENSNBRG00000019702	blm	100	72.550	ENSMALG00000007323	blm	100	72.481	Monopterus_albus
ENSNBRG00000019702	blm	88	62.456	MGP_CAROLIEiJ_G0029907	Blm	89	62.470	Mus_caroli
ENSNBRG00000019702	blm	88	62.810	ENSMUSG00000030528	Blm	88	62.604	Mus_musculus
ENSNBRG00000019702	blm	59	62.618	MGP_PahariEiJ_G0013129	Blm	59	62.441	Mus_pahari
ENSNBRG00000019702	blm	60	62.810	MGP_SPRETEiJ_G0031009	Blm	59	62.648	Mus_spretus
ENSNBRG00000019702	blm	87	62.411	ENSMLUG00000014697	BLM	88	62.411	Myotis_lucifugus
ENSNBRG00000019702	blm	56	63.985	ENSNLEG00000012087	BLM	82	71.753	Nomascus_leucogenys
ENSNBRG00000019702	blm	75	49.953	ENSMEUG00000007253	BLM	89	57.396	Notamacropus_eugenii
ENSNBRG00000019702	blm	52	65.556	ENSOPRG00000011667	BLM	80	65.272	Ochotona_princeps
ENSNBRG00000019702	blm	59	58.173	ENSODEG00000015373	BLM	81	57.701	Octodon_degus
ENSNBRG00000019702	blm	100	89.528	ENSONIG00000015193	blm	100	89.667	Oreochromis_niloticus
ENSNBRG00000019702	blm	55	65.637	ENSOANG00000009316	-	100	64.910	Ornithorhynchus_anatinus
ENSNBRG00000019702	blm	87	62.440	ENSOCUG00000013969	BLM	88	61.979	Oryctolagus_cuniculus
ENSNBRG00000019702	blm	100	73.234	ENSORLG00000008110	blm	100	72.881	Oryzias_latipes
ENSNBRG00000019702	blm	100	73.023	ENSORLG00020004812	blm	100	72.669	Oryzias_latipes_hni
ENSNBRG00000019702	blm	100	73.234	ENSORLG00015018640	blm	100	76.567	Oryzias_latipes_hsok
ENSNBRG00000019702	blm	100	71.136	ENSOMEG00000023545	blm	100	70.945	Oryzias_melastigma
ENSNBRG00000019702	blm	85	64.422	ENSOGAG00000005708	BLM	84	64.168	Otolemur_garnettii
ENSNBRG00000019702	blm	71	62.768	ENSOARG00000012875	BLM	87	62.515	Ovis_aries
ENSNBRG00000019702	blm	64	62.911	ENSPPAG00000032173	BLM	87	70.240	Pan_paniscus
ENSNBRG00000019702	blm	56	64.975	ENSPPRG00000002471	BLM	82	74.433	Panthera_pardus
ENSNBRG00000019702	blm	56	64.213	ENSPTIG00000016168	BLM	82	73.320	Panthera_tigris_altaica
ENSNBRG00000019702	blm	61	65.941	ENSPTRG00000007460	BLM	82	75.413	Pan_troglodytes
ENSNBRG00000019702	blm	61	66.113	ENSPANG00000018572	BLM	82	75.258	Papio_anubis
ENSNBRG00000019702	blm	99	54.630	ENSPKIG00000008954	blm	88	73.040	Paramormyrops_kingsleyae
ENSNBRG00000019702	blm	70	70.254	ENSPMGG00000006629	blm	99	71.384	Periophthalmus_magnuspinnatus
ENSNBRG00000019702	blm	99	46.221	ENSPEMG00000017348	Blm	59	62.989	Peromyscus_maniculatus_bairdii
ENSNBRG00000019702	blm	75	52.752	ENSPCIG00000006609	BLM	86	61.611	Phascolarctos_cinereus
ENSNBRG00000019702	blm	100	68.929	ENSPFOG00000005059	blm	100	69.133	Poecilia_formosa
ENSNBRG00000019702	blm	100	68.649	ENSPLAG00000017344	blm	100	68.992	Poecilia_latipinna
ENSNBRG00000019702	blm	100	70.259	ENSPMEG00000000321	blm	100	70.563	Poecilia_mexicana
ENSNBRG00000019702	blm	100	70.344	ENSPREG00000007715	blm	100	70.323	Poecilia_reticulata
ENSNBRG00000019702	blm	63	65.306	ENSPPYG00000006784	BLM	84	65.179	Pongo_abelii
ENSNBRG00000019702	blm	59	60.523	ENSPCAG00000008960	BLM	60	59.813	Procavia_capensis
ENSNBRG00000019702	blm	84	57.015	ENSPCOG00000000439	BLM	81	60.206	Propithecus_coquereli
ENSNBRG00000019702	blm	51	77.741	ENSPVAG00000011642	BLM	50	77.741	Pteropus_vampyrus
ENSNBRG00000019702	blm	100	87.920	ENSPNYG00000010956	blm	100	87.920	Pundamilia_nyererei
ENSNBRG00000019702	blm	100	56.637	ENSPNAG00000011714	blm	100	55.910	Pygocentrus_nattereri
ENSNBRG00000019702	blm	59	62.871	ENSRNOG00000011213	Blm	60	62.278	Rattus_norvegicus
ENSNBRG00000019702	blm	64	62.619	ENSRBIG00000029656	BLM	89	68.421	Rhinopithecus_bieti
ENSNBRG00000019702	blm	56	65.522	ENSRROG00000037871	BLM	83	74.538	Rhinopithecus_roxellana
ENSNBRG00000019702	blm	53	74.639	ENSSBOG00000030957	BLM	82	74.845	Saimiri_boliviensis_boliviensis
ENSNBRG00000019702	blm	59	63.309	ENSSHAG00000007988	BLM	87	62.830	Sarcophilus_harrisii
ENSNBRG00000019702	blm	89	72.137	ENSSFOG00015015462	blm	91	71.530	Scleropages_formosus
ENSNBRG00000019702	blm	100	71.619	ENSSMAG00000001120	blm	100	71.689	Scophthalmus_maximus
ENSNBRG00000019702	blm	100	74.157	ENSSDUG00000010955	blm	100	73.806	Seriola_dumerili
ENSNBRG00000019702	blm	100	74.368	ENSSLDG00000000634	blm	100	74.298	Seriola_lalandi_dorsalis
ENSNBRG00000019702	blm	59	58.164	ENSSARG00000006398	BLM	63	57.757	Sorex_araneus
ENSNBRG00000019702	blm	78	52.703	ENSSPUG00000000013	BLM	74	61.427	Sphenodon_punctatus
ENSNBRG00000019702	blm	99	76.690	ENSSPAG00000013999	blm	99	77.465	Stegastes_partitus
ENSNBRG00000019702	blm	59	63.345	ENSSSCG00000001816	BLM	86	66.451	Sus_scrofa
ENSNBRG00000019702	blm	61	55.236	ENSTGUG00000009959	-	73	56.543	Taeniopygia_guttata
ENSNBRG00000019702	blm	99	67.445	ENSTRUG00000019860	blm	99	67.445	Takifugu_rubripes
ENSNBRG00000019702	blm	99	65.917	ENSTNIG00000019246	blm	99	65.471	Tetraodon_nigroviridis
ENSNBRG00000019702	blm	56	66.110	ENSTTRG00000016386	BLM	84	65.813	Tursiops_truncatus
ENSNBRG00000019702	blm	84	64.987	ENSUMAG00000009105	BLM	94	67.917	Ursus_maritimus
ENSNBRG00000019702	blm	61	61.637	ENSVPAG00000000085	BLM	84	61.480	Vicugna_pacos
ENSNBRG00000019702	blm	53	78.049	ENSVVUG00000006402	BLM	82	78.049	Vulpes_vulpes
ENSNBRG00000019702	blm	99	46.424	ENSXETG00000007847	blm	83	66.923	Xenopus_tropicalis
ENSNBRG00000019702	blm	100	68.900	ENSXCOG00000020227	blm	100	68.878	Xiphophorus_couchianus
ENSNBRG00000019702	blm	100	70.737	ENSXMAG00000002951	blm	100	70.373	Xiphophorus_maculatus