EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000019854 (Gene tree)
Gene ID: 102778701
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA 3'-terminal phosphate cyclase-like protein-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 10423 bases
Position: chrJH422287.1:1909237-1919659
Accession: 102778701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025957	RTC	PF01137.21	5e-39	1	1
ENSNBRP00000025957	RTC_insert	PF05189.13	1.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026643	-	1089	XM_006789126	ENSNBRP00000025957	362 (aa)	XP_006789189	-

Gene Model

Click here to download ENSNBRG00000019854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019854	rcl1	96	74.581	ENSG00000120158	RCL1	100	82.870	Homo_sapiens
ENSNBRG00000019854	rcl1	99	84.573	ENSAPOG00000015666	rcl1	92	88.338	Acanthochromis_polyacanthus
ENSNBRG00000019854	rcl1	96	75.419	ENSAMEG00000002631	RCL1	90	78.932	Ailuropoda_melanoleuca
ENSNBRG00000019854	rcl1	99	86.226	ENSACIG00000021195	rcl1	92	90.087	Amphilophus_citrinellus
ENSNBRG00000019854	rcl1	99	83.196	ENSAOCG00000002223	rcl1	92	86.880	Amphiprion_ocellaris
ENSNBRG00000019854	rcl1	99	83.747	ENSAPEG00000006905	rcl1	92	87.464	Amphiprion_percula
ENSNBRG00000019854	rcl1	100	80.926	ENSATEG00000020026	rcl1	91	86.350	Anabas_testudineus
ENSNBRG00000019854	rcl1	90	76.596	ENSAPLG00000006031	RCL1	100	76.596	Anas_platyrhynchos
ENSNBRG00000019854	rcl1	96	70.670	ENSACAG00000003640	RCL1	92	72.886	Anolis_carolinensis
ENSNBRG00000019854	rcl1	96	73.743	ENSANAG00000037372	RCL1	90	77.151	Aotus_nancymaae
ENSNBRG00000019854	rcl1	99	91.185	ENSACLG00000021724	rcl1	92	95.335	Astatotilapia_calliptera
ENSNBRG00000019854	rcl1	99	75.691	ENSAMXG00000033394	rcl1	91	79.525	Astyanax_mexicanus
ENSNBRG00000019854	rcl1	90	46.269	WBGene00022852	ZK1127.5	90	45.882	Caenorhabditis_elegans
ENSNBRG00000019854	rcl1	96	74.302	ENSCJAG00000011202	RCL1	90	77.745	Callithrix_jacchus
ENSNBRG00000019854	rcl1	96	75.419	ENSCAFG00000002091	RCL1	90	78.932	Canis_familiaris
ENSNBRG00000019854	rcl1	96	75.419	ENSCAFG00020000638	RCL1	70	78.932	Canis_lupus_dingo
ENSNBRG00000019854	rcl1	96	74.022	ENSCHIG00000012407	RCL1	90	77.448	Capra_hircus
ENSNBRG00000019854	rcl1	90	80.183	ENSTSYG00000009592	RCL1	97	83.516	Carlito_syrichta
ENSNBRG00000019854	rcl1	67	65.432	ENSCAPG00000013575	RCL1	100	65.432	Cavia_aperea
ENSNBRG00000019854	rcl1	96	74.302	ENSCPOG00000015354	RCL1	90	77.745	Cavia_porcellus
ENSNBRG00000019854	rcl1	96	74.302	ENSCCAG00000033505	RCL1	97	81.967	Cebus_capucinus
ENSNBRG00000019854	rcl1	96	74.581	ENSCATG00000034721	RCL1	97	82.418	Cercocebus_atys
ENSNBRG00000019854	rcl1	96	74.022	ENSCLAG00000007445	RCL1	90	77.448	Chinchilla_lanigera
ENSNBRG00000019854	rcl1	96	74.581	ENSCSAG00000008811	RCL1	90	78.042	Chlorocebus_sabaeus
ENSNBRG00000019854	rcl1	75	73.913	ENSCHOG00000007216	RCL1	86	73.913	Choloepus_hoffmanni
ENSNBRG00000019854	rcl1	96	72.626	ENSCPBG00000025481	RCL1	95	76.435	Chrysemys_picta_bellii
ENSNBRG00000019854	rcl1	96	55.125	ENSCING00000019565	-	92	56.647	Ciona_intestinalis
ENSNBRG00000019854	rcl1	96	74.581	ENSCANG00000027099	RCL1	90	78.042	Colobus_angolensis_palliatus
ENSNBRG00000019854	rcl1	96	75.140	ENSCGRG00001013748	Rcl1	90	78.635	Cricetulus_griseus_chok1gshd
ENSNBRG00000019854	rcl1	90	79.939	ENSCGRG00000005843	Rcl1	99	79.939	Cricetulus_griseus_crigri
ENSNBRG00000019854	rcl1	99	81.768	ENSCSEG00000000712	rcl1	90	85.131	Cynoglossus_semilaevis
ENSNBRG00000019854	rcl1	99	84.573	ENSCVAG00000011536	rcl1	91	89.614	Cyprinodon_variegatus
ENSNBRG00000019854	rcl1	99	73.554	ENSDARG00000038312	rcl1	90	79.331	Danio_rerio
ENSNBRG00000019854	rcl1	73	80.075	ENSDNOG00000019911	RCL1	100	83.333	Dasypus_novemcinctus
ENSNBRG00000019854	rcl1	96	75.698	ENSDORG00000015645	Rcl1	90	79.228	Dipodomys_ordii
ENSNBRG00000019854	rcl1	93	53.026	FBgn0020909	Rtc1	90	53.890	Drosophila_melanogaster
ENSNBRG00000019854	rcl1	67	63.821	ENSETEG00000014087	-	100	53.963	Echinops_telfairi
ENSNBRG00000019854	rcl1	93	54.360	ENSEBUG00000016621	-	92	54.070	Eptatretus_burgeri
ENSNBRG00000019854	rcl1	96	74.302	ENSEASG00005010653	RCL1	90	77.745	Equus_asinus_asinus
ENSNBRG00000019854	rcl1	96	74.302	ENSECAG00000015973	RCL1	90	77.745	Equus_caballus
ENSNBRG00000019854	rcl1	83	72.368	ENSEEUG00000009801	RCL1	80	72.368	Erinaceus_europaeus
ENSNBRG00000019854	rcl1	99	73.961	ENSELUG00000007353	rcl1	92	77.126	Esox_lucius
ENSNBRG00000019854	rcl1	96	74.022	ENSFCAG00000014557	RCL1	90	77.448	Felis_catus
ENSNBRG00000019854	rcl1	90	76.829	ENSFALG00000010553	RCL1	87	76.829	Ficedula_albicollis
ENSNBRG00000019854	rcl1	90	77.134	ENSFDAG00000004209	RCL1	100	77.134	Fukomys_damarensis
ENSNBRG00000019854	rcl1	99	84.298	ENSFHEG00000011228	rcl1	90	90.881	Fundulus_heteroclitus
ENSNBRG00000019854	rcl1	99	75.482	ENSGMOG00000004677	rcl1	92	78.717	Gadus_morhua
ENSNBRG00000019854	rcl1	96	72.067	ENSGALG00000015024	RCL1	91	74.344	Gallus_gallus
ENSNBRG00000019854	rcl1	99	84.022	ENSGAFG00000007257	rcl1	91	89.021	Gambusia_affinis
ENSNBRG00000019854	rcl1	99	81.267	ENSGACG00000017474	rcl1	88	87.538	Gasterosteus_aculeatus
ENSNBRG00000019854	rcl1	96	72.346	ENSGAGG00000003689	RCL1	92	74.636	Gopherus_agassizii
ENSNBRG00000019854	rcl1	96	74.022	ENSGGOG00000015041	RCL1	97	81.868	Gorilla_gorilla
ENSNBRG00000019854	rcl1	99	91.460	ENSHBUG00000001393	rcl1	92	95.627	Haplochromis_burtoni
ENSNBRG00000019854	rcl1	96	74.022	ENSHGLG00000016452	RCL1	90	77.448	Heterocephalus_glaber_female
ENSNBRG00000019854	rcl1	92	65.269	ENSHGLG00000005368	-	89	65.269	Heterocephalus_glaber_female
ENSNBRG00000019854	rcl1	92	66.168	ENSHGLG00100018010	-	89	66.168	Heterocephalus_glaber_male
ENSNBRG00000019854	rcl1	90	78.659	ENSHGLG00100008718	-	94	78.659	Heterocephalus_glaber_male
ENSNBRG00000019854	rcl1	99	83.196	ENSHCOG00000020170	rcl1	91	87.834	Hippocampus_comes
ENSNBRG00000019854	rcl1	99	75.758	ENSIPUG00000018054	RCL1	91	80.119	Ictalurus_punctatus
ENSNBRG00000019854	rcl1	96	74.022	ENSSTOG00000000023	RCL1	90	77.448	Ictidomys_tridecemlineatus
ENSNBRG00000019854	rcl1	87	72.013	ENSJJAG00000015632	-	85	72.013	Jaculus_jaculus
ENSNBRG00000019854	rcl1	96	75.419	ENSJJAG00000022803	-	90	78.932	Jaculus_jaculus
ENSNBRG00000019854	rcl1	56	63.366	ENSJJAG00000000764	-	98	63.366	Jaculus_jaculus
ENSNBRG00000019854	rcl1	99	83.196	ENSKMAG00000011946	rcl1	92	87.172	Kryptolebias_marmoratus
ENSNBRG00000019854	rcl1	96	83.954	ENSLBEG00000003957	rcl1	93	87.879	Labrus_bergylta
ENSNBRG00000019854	rcl1	88	70.482	ENSLACG00000004594	RCL1	91	77.474	Latimeria_chalumnae
ENSNBRG00000019854	rcl1	96	75.698	ENSLOCG00000010148	rcl1	87	80.547	Lepisosteus_oculatus
ENSNBRG00000019854	rcl1	96	73.743	ENSLAFG00000017495	RCL1	90	77.151	Loxodonta_africana
ENSNBRG00000019854	rcl1	96	74.581	ENSMFAG00000037906	RCL1	90	78.042	Macaca_fascicularis
ENSNBRG00000019854	rcl1	96	74.581	ENSMNEG00000012288	RCL1	97	82.418	Macaca_nemestrina
ENSNBRG00000019854	rcl1	96	74.581	ENSMLEG00000043088	RCL1	90	78.042	Mandrillus_leucophaeus
ENSNBRG00000019854	rcl1	100	82.834	ENSMAMG00000008311	rcl1	91	88.724	Mastacembelus_armatus
ENSNBRG00000019854	rcl1	99	91.185	ENSMZEG00005017292	rcl1	92	95.335	Maylandia_zebra
ENSNBRG00000019854	rcl1	60	75.909	ENSMGAG00000002245	RCL1	100	75.909	Meleagris_gallopavo
ENSNBRG00000019854	rcl1	60	82.870	ENSMAUG00000008922	Rcl1	100	82.870	Mesocricetus_auratus
ENSNBRG00000019854	rcl1	96	74.581	ENSMICG00000015562	RCL1	90	78.042	Microcebus_murinus
ENSNBRG00000019854	rcl1	96	75.140	ENSMOCG00000012145	Rcl1	90	78.635	Microtus_ochrogaster
ENSNBRG00000019854	rcl1	100	77.174	ENSMMOG00000021264	rcl1	92	83.140	Mola_mola
ENSNBRG00000019854	rcl1	91	73.235	ENSMODG00000015377	RCL1	86	75.692	Monodelphis_domestica
ENSNBRG00000019854	rcl1	99	83.471	ENSMALG00000018618	rcl1	91	88.427	Monopterus_albus
ENSNBRG00000019854	rcl1	96	74.860	MGP_CAROLIEiJ_G0022853	Rcl1	90	78.338	Mus_caroli
ENSNBRG00000019854	rcl1	96	74.302	ENSMUSG00000024785	Rcl1	90	77.745	Mus_musculus
ENSNBRG00000019854	rcl1	96	74.860	MGP_PahariEiJ_G0014346	Rcl1	100	81.871	Mus_pahari
ENSNBRG00000019854	rcl1	96	74.302	MGP_SPRETEiJ_G0023771	Rcl1	100	81.287	Mus_spretus
ENSNBRG00000019854	rcl1	96	75.140	ENSMPUG00000004998	RCL1	90	78.635	Mustela_putorius_furo
ENSNBRG00000019854	rcl1	96	73.464	ENSMLUG00000009654	RCL1	90	76.855	Myotis_lucifugus
ENSNBRG00000019854	rcl1	96	74.860	ENSNGAG00000015327	Rcl1	90	78.338	Nannospalax_galili
ENSNBRG00000019854	rcl1	96	71.788	ENSNLEG00000008891	RCL1	90	75.074	Nomascus_leucogenys
ENSNBRG00000019854	rcl1	83	77.632	ENSMEUG00000007653	RCL1	81	77.632	Notamacropus_eugenii
ENSNBRG00000019854	rcl1	96	72.905	ENSOPRG00000010965	RCL1	90	76.261	Ochotona_princeps
ENSNBRG00000019854	rcl1	90	67.791	ENSODEG00000004151	RCL1	96	67.791	Octodon_degus
ENSNBRG00000019854	rcl1	99	90.909	ENSONIG00000003871	rcl1	92	95.044	Oreochromis_niloticus
ENSNBRG00000019854	rcl1	67	77.108	ENSOANG00000013193	-	98	77.108	Ornithorhynchus_anatinus
ENSNBRG00000019854	rcl1	96	74.022	ENSOCUG00000008161	RCL1	90	77.448	Oryctolagus_cuniculus
ENSNBRG00000019854	rcl1	99	80.939	ENSORLG00000010443	rcl1	92	84.257	Oryzias_latipes
ENSNBRG00000019854	rcl1	99	80.992	ENSORLG00020012211	rcl1	92	84.548	Oryzias_latipes_hni
ENSNBRG00000019854	rcl1	99	80.441	ENSORLG00015001122	rcl1	92	83.965	Oryzias_latipes_hsok
ENSNBRG00000019854	rcl1	99	82.597	ENSOMEG00000022976	rcl1	81	86.006	Oryzias_melastigma
ENSNBRG00000019854	rcl1	96	74.302	ENSOGAG00000007480	RCL1	90	77.745	Otolemur_garnettii
ENSNBRG00000019854	rcl1	96	74.022	ENSOARG00000013463	RCL1	90	77.448	Ovis_aries
ENSNBRG00000019854	rcl1	96	74.581	ENSPPAG00000037958	RCL1	90	78.042	Pan_paniscus
ENSNBRG00000019854	rcl1	96	74.157	ENSPPRG00000022645	RCL1	96	82.123	Panthera_pardus
ENSNBRG00000019854	rcl1	90	78.593	ENSPTIG00000019031	RCL1	100	81.944	Panthera_tigris_altaica
ENSNBRG00000019854	rcl1	96	74.302	ENSPTRG00000020743	RCL1	97	82.418	Pan_troglodytes
ENSNBRG00000019854	rcl1	96	74.581	ENSPANG00000025151	RCL1	90	78.042	Papio_anubis
ENSNBRG00000019854	rcl1	99	75.482	ENSPKIG00000021022	rcl1	92	79.009	Paramormyrops_kingsleyae
ENSNBRG00000019854	rcl1	90	76.900	ENSPSIG00000012302	RCL1	100	76.900	Pelodiscus_sinensis
ENSNBRG00000019854	rcl1	100	79.837	ENSPMGG00000024007	rcl1	91	85.163	Periophthalmus_magnuspinnatus
ENSNBRG00000019854	rcl1	96	75.140	ENSPEMG00000023275	Rcl1	90	78.635	Peromyscus_maniculatus_bairdii
ENSNBRG00000019854	rcl1	50	69.444	ENSPMAG00000005419	-	95	69.832	Petromyzon_marinus
ENSNBRG00000019854	rcl1	96	73.743	ENSPCIG00000000188	RCL1	93	78.049	Phascolarctos_cinereus
ENSNBRG00000019854	rcl1	99	84.298	ENSPFOG00000019682	rcl1	90	89.318	Poecilia_formosa
ENSNBRG00000019854	rcl1	99	84.298	ENSPLAG00000022354	rcl1	91	89.318	Poecilia_latipinna
ENSNBRG00000019854	rcl1	99	84.298	ENSPMEG00000008131	rcl1	91	89.318	Poecilia_mexicana
ENSNBRG00000019854	rcl1	99	83.747	ENSPREG00000008032	rcl1	91	88.724	Poecilia_reticulata
ENSNBRG00000019854	rcl1	96	74.860	ENSPPYG00000019244	RCL1	90	78.338	Pongo_abelii
ENSNBRG00000019854	rcl1	96	69.382	ENSPCAG00000001440	RCL1	92	71.554	Procavia_capensis
ENSNBRG00000019854	rcl1	96	75.140	ENSPCOG00000009611	RCL1	97	82.967	Propithecus_coquereli
ENSNBRG00000019854	rcl1	96	74.022	ENSPVAG00000015752	RCL1	90	77.448	Pteropus_vampyrus
ENSNBRG00000019854	rcl1	99	91.460	ENSPNYG00000012910	rcl1	92	95.627	Pundamilia_nyererei
ENSNBRG00000019854	rcl1	99	75.691	ENSPNAG00000028307	rcl1	83	79.525	Pygocentrus_nattereri
ENSNBRG00000019854	rcl1	96	74.581	ENSRNOG00000015491	Rcl1	90	78.042	Rattus_norvegicus
ENSNBRG00000019854	rcl1	96	74.302	ENSRBIG00000035818	RCL1	90	77.745	Rhinopithecus_bieti
ENSNBRG00000019854	rcl1	96	74.581	ENSRROG00000029781	RCL1	97	82.418	Rhinopithecus_roxellana
ENSNBRG00000019854	rcl1	91	34.925	YOL010W	-	89	34.925	Saccharomyces_cerevisiae
ENSNBRG00000019854	rcl1	96	74.581	ENSSBOG00000026369	RCL1	97	82.514	Saimiri_boliviensis_boliviensis
ENSNBRG00000019854	rcl1	90	78.116	ENSSHAG00000014086	RCL1	99	78.116	Sarcophilus_harrisii
ENSNBRG00000019854	rcl1	96	74.860	ENSSFOG00015023020	rcl1	88	79.939	Scleropages_formosus
ENSNBRG00000019854	rcl1	99	83.471	ENSSMAG00000019751	rcl1	78	88.427	Scophthalmus_maximus
ENSNBRG00000019854	rcl1	99	85.124	ENSSDUG00000006349	rcl1	92	88.921	Seriola_dumerili
ENSNBRG00000019854	rcl1	99	84.848	ENSSLDG00000022076	rcl1	92	88.630	Seriola_lalandi_dorsalis
ENSNBRG00000019854	rcl1	99	74.309	ENSSARG00000009260	RCL1	92	78.006	Sorex_araneus
ENSNBRG00000019854	rcl1	96	72.626	ENSSPUG00000016330	RCL1	92	74.927	Sphenodon_punctatus
ENSNBRG00000019854	rcl1	99	83.747	ENSSPAG00000018038	rcl1	91	88.724	Stegastes_partitus
ENSNBRG00000019854	rcl1	96	74.581	ENSSSCG00000005217	RCL1	75	78.042	Sus_scrofa
ENSNBRG00000019854	rcl1	96	71.667	ENSTGUG00000005138	RCL1	92	73.913	Taeniopygia_guttata
ENSNBRG00000019854	rcl1	100	80.926	ENSTRUG00000010493	rcl1	92	85.423	Takifugu_rubripes
ENSNBRG00000019854	rcl1	100	78.202	ENSTNIG00000013214	rcl1	92	82.507	Tetraodon_nigroviridis
ENSNBRG00000019854	rcl1	96	69.832	ENSTBEG00000016339	RCL1	90	72.997	Tupaia_belangeri
ENSNBRG00000019854	rcl1	96	74.022	ENSTTRG00000016525	RCL1	90	77.448	Tursiops_truncatus
ENSNBRG00000019854	rcl1	96	75.419	ENSUAMG00000005598	RCL1	90	78.932	Ursus_americanus
ENSNBRG00000019854	rcl1	90	79.573	ENSUMAG00000017890	RCL1	97	79.573	Ursus_maritimus
ENSNBRG00000019854	rcl1	90	79.268	ENSVPAG00000009188	RCL1	100	79.268	Vicugna_pacos
ENSNBRG00000019854	rcl1	91	80.120	ENSVVUG00000007304	RCL1	89	80.120	Vulpes_vulpes
ENSNBRG00000019854	rcl1	93	70.349	ENSXETG00000000592	rcl1	92	70.349	Xenopus_tropicalis
ENSNBRG00000019854	rcl1	99	84.573	ENSXCOG00000004922	rcl1	91	89.614	Xiphophorus_couchianus
ENSNBRG00000019854	rcl1	99	84.573	ENSXMAG00000022366	RCL1	91	89.614	Xiphophorus_maculatus