EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000019881 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2866 bases
Position: chrJH422293.1:250714-253579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000025975	zf-C2H2	PF00096.26	1e-11	1	3
ENSNBRP00000025975	zf-C2H2	PF00096.26	1e-11	2	3
ENSNBRP00000025975	zf-C2H2	PF00096.26	1e-11	3	3
ENSNBRP00000025975	zf-met	PF12874.7	1.2e-09	1	3
ENSNBRP00000025975	zf-met	PF12874.7	1.2e-09	2	3
ENSNBRP00000025975	zf-met	PF12874.7	1.2e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026660	-	990	-	ENSNBRP00000025975	329 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000019881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000019881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000019881	-	60	34.286	ENSNBRG00000004792	-	55	38.000
ENSNBRG00000019881	-	54	40.000	ENSNBRG00000000321	-	92	58.333
ENSNBRG00000019881	-	54	39.831	ENSNBRG00000000492	-	79	39.831
ENSNBRG00000019881	-	62	40.541	ENSNBRG00000016234	-	76	40.541
ENSNBRG00000019881	-	68	40.984	ENSNBRG00000014088	-	97	50.000
ENSNBRG00000019881	-	56	30.457	ENSNBRG00000006757	-	56	30.857
ENSNBRG00000019881	-	65	41.525	ENSNBRG00000003124	-	97	41.525
ENSNBRG00000019881	-	66	41.176	ENSNBRG00000024014	-	70	41.176
ENSNBRG00000019881	-	60	44.828	ENSNBRG00000021375	-	59	44.828
ENSNBRG00000019881	-	55	36.752	ENSNBRG00000010987	-	86	36.752
ENSNBRG00000019881	-	51	39.655	ENSNBRG00000008106	-	92	39.655
ENSNBRG00000019881	-	64	43.750	ENSNBRG00000013604	-	66	43.750
ENSNBRG00000019881	-	68	44.318	ENSNBRG00000001163	-	95	40.870
ENSNBRG00000019881	-	58	39.831	ENSNBRG00000024020	-	56	39.831
ENSNBRG00000019881	-	65	37.931	ENSNBRG00000024066	-	97	39.655
ENSNBRG00000019881	-	57	41.071	ENSNBRG00000007276	-	65	41.071
ENSNBRG00000019881	-	52	53.448	ENSNBRG00000002902	-	97	57.143
ENSNBRG00000019881	-	96	37.405	ENSNBRG00000008223	-	88	37.121
ENSNBRG00000019881	-	98	54.386	ENSNBRG00000024179	-	99	39.167
ENSNBRG00000019881	-	55	41.880	ENSNBRG00000000577	-	85	41.880
ENSNBRG00000019881	-	55	41.525	ENSNBRG00000000960	-	95	55.357
ENSNBRG00000019881	-	54	33.333	ENSNBRG00000021967	-	77	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000019881	-	99	92.000	ENSATEG00000023773	-	70	92.000	Anabas_testudineus
ENSNBRG00000019881	-	98	72.000	ENSCSEG00000011817	-	70	72.000	Cynoglossus_semilaevis
ENSNBRG00000019881	-	56	57.143	ENSDARG00000105137	zgc:173705	70	57.143	Danio_rerio
ENSNBRG00000019881	-	56	32.258	ENSDARG00000111550	CABZ01002702.1	65	39.655	Danio_rerio
ENSNBRG00000019881	-	51	37.500	ENSDARG00000092938	znf1047	80	37.500	Danio_rerio
ENSNBRG00000019881	-	64	41.026	ENSDARG00000091393	si:ch211-161m3.6	63	43.103	Danio_rerio
ENSNBRG00000019881	-	51	37.500	ENSDARG00000091994	znf1048	80	37.500	Danio_rerio
ENSNBRG00000019881	-	57	35.965	ENSDARG00000113971	LO018181.1	61	38.889	Danio_rerio
ENSNBRG00000019881	-	60	44.915	ENSDARG00000089715	si:cabz01054394.7	73	44.915	Danio_rerio
ENSNBRG00000019881	-	51	37.500	ENSDARG00000102600	CABZ01003344.1	80	37.500	Danio_rerio
ENSNBRG00000019881	-	94	72.857	ENSFHEG00000015400	-	70	72.857	Fundulus_heteroclitus
ENSNBRG00000019881	-	66	40.625	ENSFHEG00000021020	-	67	40.625	Fundulus_heteroclitus
ENSNBRG00000019881	-	98	80.000	ENSGAFG00000013839	-	79	80.000	Gambusia_affinis
ENSNBRG00000019881	-	63	32.895	ENSKMAG00000011441	-	81	34.884	Kryptolebias_marmoratus
ENSNBRG00000019881	-	98	86.667	ENSMAMG00000020468	-	73	86.667	Mastacembelus_armatus
ENSNBRG00000019881	-	68	38.136	ENSORLG00000012434	znf1064	69	38.136	Oryzias_latipes
ENSNBRG00000019881	-	75	56.855	ENSORLG00015013828	-	79	56.855	Oryzias_latipes_hsok
ENSNBRG00000019881	-	98	53.636	ENSOMEG00000005928	-	91	42.680	Oryzias_melastigma
ENSNBRG00000019881	-	98	50.459	ENSPFOG00000005998	-	84	61.132	Poecilia_formosa
ENSNBRG00000019881	-	56	37.069	ENSPFOG00000022423	-	85	41.667	Poecilia_formosa
ENSNBRG00000019881	-	98	82.857	ENSPLAG00000001674	-	71	82.857	Poecilia_latipinna
ENSNBRG00000019881	-	94	82.857	ENSPMEG00000013200	-	71	82.857	Poecilia_mexicana
ENSNBRG00000019881	-	51	37.273	ENSPREG00000005015	-	89	43.802	Poecilia_reticulata
ENSNBRG00000019881	-	98	78.378	ENSSMAG00000002598	-	73	78.378	Scophthalmus_maximus
ENSNBRG00000019881	-	99	88.000	ENSSDUG00000015456	-	73	88.000	Seriola_dumerili
ENSNBRG00000019881	-	98	78.313	ENSSPAG00000017203	-	79	78.313	Stegastes_partitus
ENSNBRG00000019881	-	63	40.870	ENSXETG00000031310	-	66	40.870	Xenopus_tropicalis
ENSNBRG00000019881	-	97	81.429	ENSXMAG00000021195	-	69	81.429	Xiphophorus_maculatus