EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000020059 (Gene tree)
Gene ID: 102799025
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX17-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4497 bases
Position: chrJH422291.1:2886905-2891401
Accession: 102799025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000026246	DEAD	PF00270.29	4.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000026939	-	1275	XM_006790621	ENSNBRP00000026246	424 (aa)	XP_006790684	UPI0003EC4212

Gene Model

Click here to download ENSNBRG00000020059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000020059	-	72	34.615	ENSNBRG00000022025	ddx49	64	34.615
ENSNBRG00000020059	-	82	37.119	ENSNBRG00000015087	DDX41	58	37.119
ENSNBRG00000020059	-	71	33.775	ENSNBRG00000021671	eif4a3	72	33.775
ENSNBRG00000020059	-	77	36.657	ENSNBRG00000014442	ddx4	75	37.124
ENSNBRG00000020059	-	82	43.784	ENSNBRG00000020448	-	52	43.784
ENSNBRG00000020059	-	99	87.943	ENSNBRG00000002592	DDX17	92	89.630
ENSNBRG00000020059	-	75	36.164	ENSNBRG00000001394	ddx47	65	35.849
ENSNBRG00000020059	-	90	43.291	ENSNBRG00000010942	ddx43	56	43.291
ENSNBRG00000020059	-	83	81.356	ENSNBRG00000001026	ddx5	61	81.356
ENSNBRG00000020059	-	88	62.299	ENSNBRG00000002979	DDX5	59	62.533
ENSNBRG00000020059	-	71	33.003	ENSNBRG00000004471	eif4a2	72	33.003
ENSNBRG00000020059	-	82	42.857	ENSNBRG00000019630	-	54	42.857
ENSNBRG00000020059	-	72	30.449	ENSNBRG00000015075	-	67	30.449
ENSNBRG00000020059	-	84	33.705	ENSNBRG00000002029	ddx59	60	33.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020059	-	93	86.329	ENSG00000100201	DDX17	73	97.561	Homo_sapiens
ENSNBRG00000020059	-	96	95.567	ENSAPOG00000017303	si:dkey-156n14.5	63	95.567	Acanthochromis_polyacanthus
ENSNBRG00000020059	-	93	86.329	ENSAMEG00000010601	DDX17	55	86.000	Ailuropoda_melanoleuca
ENSNBRG00000020059	-	96	95.567	ENSAOCG00000004874	si:dkey-156n14.5	63	95.567	Amphiprion_ocellaris
ENSNBRG00000020059	-	96	95.320	ENSAPEG00000018317	si:dkey-156n14.5	63	95.320	Amphiprion_percula
ENSNBRG00000020059	-	99	91.647	ENSATEG00000021733	si:dkey-156n14.5	65	94.335	Anabas_testudineus
ENSNBRG00000020059	-	90	88.802	ENSAPLG00000014334	-	64	88.802	Anas_platyrhynchos
ENSNBRG00000020059	-	79	90.504	ENSANAG00000035052	DDX17	54	90.504	Aotus_nancymaae
ENSNBRG00000020059	-	96	88.943	ENSACLG00000015882	DDX17	62	92.031	Astatotilapia_calliptera
ENSNBRG00000020059	-	96	99.754	ENSACLG00000015887	si:dkey-156n14.5	62	99.754	Astatotilapia_calliptera
ENSNBRG00000020059	-	93	86.329	ENSBTAG00000009887	DDX17	93	88.402	Bos_taurus
ENSNBRG00000020059	-	90	58.225	WBGene00010260	ddx-17	71	57.500	Caenorhabditis_elegans
ENSNBRG00000020059	-	91	88.372	ENSCJAG00000011797	DDX17	90	89.034	Callithrix_jacchus
ENSNBRG00000020059	-	93	86.329	ENSCAFG00000001395	DDX17	62	85.432	Canis_familiaris
ENSNBRG00000020059	-	100	84.038	ENSCAFG00020002867	DDX17	93	88.402	Canis_lupus_dingo
ENSNBRG00000020059	-	93	86.329	ENSCHIG00000021332	DDX17	93	88.402	Capra_hircus
ENSNBRG00000020059	-	97	85.158	ENSTSYG00000001303	DDX17	96	88.432	Carlito_syrichta
ENSNBRG00000020059	-	93	86.329	ENSCPOG00000011790	DDX17	93	88.402	Cavia_porcellus
ENSNBRG00000020059	-	93	86.329	ENSCCAG00000024116	DDX17	95	88.205	Cebus_capucinus
ENSNBRG00000020059	-	93	86.329	ENSCATG00000035701	DDX17	93	88.402	Cercocebus_atys
ENSNBRG00000020059	-	93	86.329	ENSCLAG00000017294	DDX17	93	88.402	Chinchilla_lanigera
ENSNBRG00000020059	-	93	86.329	ENSCSAG00000006649	DDX17	62	85.432	Chlorocebus_sabaeus
ENSNBRG00000020059	-	93	86.076	ENSCHOG00000001931	DDX17	55	85.750	Choloepus_hoffmanni
ENSNBRG00000020059	-	88	70.081	ENSCING00000004147	-	67	68.912	Ciona_intestinalis
ENSNBRG00000020059	-	84	50.138	ENSCING00000008750	-	63	50.138	Ciona_intestinalis
ENSNBRG00000020059	-	93	86.329	ENSCANG00000002348	DDX17	93	88.402	Colobus_angolensis_palliatus
ENSNBRG00000020059	-	89	89.390	ENSCGRG00001023050	Ddx17	62	84.975	Cricetulus_griseus_chok1gshd
ENSNBRG00000020059	-	89	89.390	ENSCGRG00000007756	Ddx17	62	84.975	Cricetulus_griseus_crigri
ENSNBRG00000020059	-	96	94.866	ENSCSEG00000011351	si:dkey-156n14.5	99	94.866	Cynoglossus_semilaevis
ENSNBRG00000020059	-	91	93.005	ENSCVAG00000010921	si:dkey-156n14.5	63	94.866	Cyprinodon_variegatus
ENSNBRG00000020059	-	100	87.324	ENSDARG00000010873	DDX17	99	90.000	Danio_rerio
ENSNBRG00000020059	-	93	86.329	ENSDNOG00000006499	DDX17	55	86.000	Dasypus_novemcinctus
ENSNBRG00000020059	-	89	89.390	ENSDORG00000003358	Ddx17	62	85.432	Dipodomys_ordii
ENSNBRG00000020059	-	92	64.541	FBgn0035720	CG10077	84	64.899	Drosophila_melanogaster
ENSNBRG00000020059	-	93	86.329	ENSEASG00005018767	DDX17	62	85.432	Equus_asinus_asinus
ENSNBRG00000020059	-	93	86.329	ENSECAG00000025110	DDX17	93	88.402	Equus_caballus
ENSNBRG00000020059	-	93	86.329	ENSFCAG00000031570	DDX17	93	88.402	Felis_catus
ENSNBRG00000020059	-	94	86.070	ENSFALG00000012560	DDX17	55	85.504	Ficedula_albicollis
ENSNBRG00000020059	-	91	88.372	ENSFDAG00000009967	DDX17	61	88.372	Fukomys_damarensis
ENSNBRG00000020059	-	90	89.062	ENSGALG00000037360	DDX17	62	85.504	Gallus_gallus
ENSNBRG00000020059	-	96	76.847	ENSGACG00000019151	si:dkey-156n14.5	64	76.601	Gasterosteus_aculeatus
ENSNBRG00000020059	-	91	88.372	ENSGGOG00000008309	DDX17	93	88.402	Gorilla_gorilla
ENSNBRG00000020059	-	96	99.507	ENSHBUG00000021303	si:dkey-156n14.5	62	99.507	Haplochromis_burtoni
ENSNBRG00000020059	-	96	88.943	ENSHBUG00000022268	DDX17	62	92.031	Haplochromis_burtoni
ENSNBRG00000020059	-	93	86.329	ENSHGLG00000012568	DDX17	55	86.000	Heterocephalus_glaber_female
ENSNBRG00000020059	-	93	86.329	ENSHGLG00100011291	DDX17	92	89.034	Heterocephalus_glaber_male
ENSNBRG00000020059	-	100	89.176	ENSIPUG00000015768	si:dkey-156n14.5	97	92.051	Ictalurus_punctatus
ENSNBRG00000020059	-	93	86.329	ENSSTOG00000013699	DDX17	55	86.000	Ictidomys_tridecemlineatus
ENSNBRG00000020059	-	93	86.329	ENSJJAG00000011350	Ddx17	55	86.000	Jaculus_jaculus
ENSNBRG00000020059	-	93	86.329	ENSMFAG00000046051	DDX17	93	88.402	Macaca_fascicularis
ENSNBRG00000020059	-	93	86.329	ENSMMUG00000004304	DDX17	93	88.402	Macaca_mulatta
ENSNBRG00000020059	-	93	86.329	ENSMNEG00000022218	DDX17	93	88.402	Macaca_nemestrina
ENSNBRG00000020059	-	92	88.432	ENSMLEG00000029141	DDX17	92	89.034	Mandrillus_leucophaeus
ENSNBRG00000020059	-	96	94.581	ENSMAMG00000008427	si:dkey-156n14.5	64	94.581	Mastacembelus_armatus
ENSNBRG00000020059	-	96	99.754	ENSMZEG00005009937	si:dkey-156n14.5	62	99.754	Maylandia_zebra
ENSNBRG00000020059	-	91	88.689	ENSMGAG00000012423	DDX17	86	95.506	Meleagris_gallopavo
ENSNBRG00000020059	-	84	77.871	ENSMAUG00000020476	Ddx17	88	76.630	Mesocricetus_auratus
ENSNBRG00000020059	-	93	86.329	ENSMICG00000011601	DDX17	93	88.402	Microcebus_murinus
ENSNBRG00000020059	-	89	85.372	ENSMOCG00000010769	Ddx17	56	81.235	Microtus_ochrogaster
ENSNBRG00000020059	-	92	91.816	ENSMMOG00000002806	-	95	91.816	Mola_mola
ENSNBRG00000020059	-	99	90.023	ENSMMOG00000007416	si:dkey-156n14.5	100	90.023	Mola_mola
ENSNBRG00000020059	-	93	86.582	ENSMODG00000009681	DDX17	62	88.630	Monodelphis_domestica
ENSNBRG00000020059	-	96	94.089	ENSMALG00000002485	si:dkey-156n14.5	63	94.089	Monopterus_albus
ENSNBRG00000020059	-	89	89.390	MGP_CAROLIEiJ_G0020017	Ddx17	62	84.975	Mus_caroli
ENSNBRG00000020059	-	89	89.418	ENSMUSG00000055065	Ddx17	96	87.692	Mus_musculus
ENSNBRG00000020059	-	93	86.329	MGP_PahariEiJ_G0020019	Ddx17	62	84.975	Mus_pahari
ENSNBRG00000020059	-	89	89.390	MGP_SPRETEiJ_G0020915	Ddx17	62	84.975	Mus_spretus
ENSNBRG00000020059	-	93	86.329	ENSMPUG00000013125	DDX17	62	85.432	Mustela_putorius_furo
ENSNBRG00000020059	-	96	84.597	ENSMLUG00000013151	DDX17	63	84.597	Myotis_lucifugus
ENSNBRG00000020059	-	93	86.329	ENSNGAG00000004001	Ddx17	61	86.000	Nannospalax_galili
ENSNBRG00000020059	-	92	87.755	ENSNLEG00000015117	DDX17	93	88.205	Nomascus_leucogenys
ENSNBRG00000020059	-	91	88.630	ENSMEUG00000009627	DDX17	60	89.267	Notamacropus_eugenii
ENSNBRG00000020059	-	93	86.076	ENSOPRG00000014734	DDX17	55	85.750	Ochotona_princeps
ENSNBRG00000020059	-	93	80.451	ENSODEG00000013118	DDX17	55	80.198	Octodon_degus
ENSNBRG00000020059	-	96	99.507	ENSONIG00000018880	si:dkey-156n14.5	99	99.265	Oreochromis_niloticus
ENSNBRG00000020059	-	89	89.125	ENSOCUG00000004982	DDX17	62	85.185	Oryctolagus_cuniculus
ENSNBRG00000020059	-	96	94.349	ENSORLG00000013685	si:dkey-156n14.5	63	94.349	Oryzias_latipes
ENSNBRG00000020059	-	99	92.143	ENSORLG00020021743	si:dkey-156n14.5	65	92.143	Oryzias_latipes_hni
ENSNBRG00000020059	-	99	92.143	ENSORLG00015022548	si:dkey-156n14.5	63	94.840	Oryzias_latipes_hsok
ENSNBRG00000020059	-	96	94.840	ENSOMEG00000009515	si:dkey-156n14.5	65	91.765	Oryzias_melastigma
ENSNBRG00000020059	-	93	86.329	ENSOGAG00000001539	DDX17	62	85.432	Otolemur_garnettii
ENSNBRG00000020059	-	91	88.372	ENSOARG00000015489	DDX17	61	88.372	Ovis_aries
ENSNBRG00000020059	-	91	88.372	ENSPPAG00000042301	DDX17	93	88.402	Pan_paniscus
ENSNBRG00000020059	-	93	86.329	ENSPPRG00000008444	DDX17	53	86.000	Panthera_pardus
ENSNBRG00000020059	-	96	85.468	ENSPTIG00000008733	DDX17	94	88.432	Panthera_tigris_altaica
ENSNBRG00000020059	-	91	88.372	ENSPTRG00000014369	DDX17	93	88.402	Pan_troglodytes
ENSNBRG00000020059	-	92	88.432	ENSPANG00000015143	DDX17	93	88.402	Papio_anubis
ENSNBRG00000020059	-	100	88.235	ENSPKIG00000002575	si:dkey-156n14.5	62	87.765	Paramormyrops_kingsleyae
ENSNBRG00000020059	-	100	87.765	ENSPKIG00000007831	DDX17	60	89.681	Paramormyrops_kingsleyae
ENSNBRG00000020059	-	57	93.827	ENSPMGG00000007437	si:dkey-156n14.5	80	93.827	Periophthalmus_magnuspinnatus
ENSNBRG00000020059	-	89	89.390	ENSPEMG00000021115	Ddx17	62	84.975	Peromyscus_maniculatus_bairdii
ENSNBRG00000020059	-	93	86.582	ENSPCIG00000001652	DDX17	62	85.679	Phascolarctos_cinereus
ENSNBRG00000020059	-	91	93.540	ENSPREG00000000506	si:dkey-156n14.5	63	95.110	Poecilia_reticulata
ENSNBRG00000020059	-	93	86.329	ENSPPYG00000011821	DDX17	62	85.432	Pongo_abelii
ENSNBRG00000020059	-	93	86.329	ENSPCAG00000011672	DDX17	55	86.000	Procavia_capensis
ENSNBRG00000020059	-	96	85.258	ENSPCOG00000014360	DDX17	93	87.918	Propithecus_coquereli
ENSNBRG00000020059	-	93	86.329	ENSPVAG00000010133	DDX17	55	86.000	Pteropus_vampyrus
ENSNBRG00000020059	-	96	88.698	ENSPNYG00000019669	-	62	91.774	Pundamilia_nyererei
ENSNBRG00000020059	-	96	99.507	ENSPNYG00000005694	si:dkey-156n14.5	63	99.507	Pundamilia_nyererei
ENSNBRG00000020059	-	100	89.671	ENSPNAG00000029948	si:dkey-156n14.5	99	92.439	Pygocentrus_nattereri
ENSNBRG00000020059	-	89	89.390	ENSRNOG00000051170	Ddx17	62	84.975	Rattus_norvegicus
ENSNBRG00000020059	-	93	86.329	ENSRBIG00000031437	DDX17	89	87.738	Rhinopithecus_bieti
ENSNBRG00000020059	-	93	86.329	ENSRROG00000045378	DDX17	93	88.402	Rhinopithecus_roxellana
ENSNBRG00000020059	-	99	59.165	YNL112W	-	74	60.396	Saccharomyces_cerevisiae
ENSNBRG00000020059	-	93	72.658	ENSSBOG00000024547	DDX17	52	72.500	Saimiri_boliviensis_boliviensis
ENSNBRG00000020059	-	91	88.402	ENSSHAG00000004578	DDX17	63	86.035	Sarcophilus_harrisii
ENSNBRG00000020059	-	100	88.941	ENSSFOG00015012308	ddx17	59	90.909	Scleropages_formosus
ENSNBRG00000020059	-	100	89.858	ENSSMAG00000007794	si:dkey-156n14.5	64	89.858	Scophthalmus_maximus
ENSNBRG00000020059	-	91	90.979	ENSSMAG00000005509	DDX17	59	90.979	Scophthalmus_maximus
ENSNBRG00000020059	-	96	95.320	ENSSPAG00000017130	si:dkey-156n14.5	63	95.320	Stegastes_partitus
ENSNBRG00000020059	-	92	92.308	ENSSPAG00000019808	-	96	92.308	Stegastes_partitus
ENSNBRG00000020059	-	93	86.329	ENSSSCG00000000104	DDX17	93	88.402	Sus_scrofa
ENSNBRG00000020059	-	90	89.062	ENSTGUG00000010391	DDX17	62	85.504	Taeniopygia_guttata
ENSNBRG00000020059	-	100	88.443	ENSTRUG00000021931	si:dkey-156n14.5	66	88.443	Takifugu_rubripes
ENSNBRG00000020059	-	60	88.976	ENSTNIG00000002291	-	93	88.976	Tetraodon_nigroviridis
ENSNBRG00000020059	-	91	86.563	ENSTTRG00000005623	DDX17	60	87.173	Tursiops_truncatus
ENSNBRG00000020059	-	96	85.258	ENSUAMG00000007290	DDX17	82	85.258	Ursus_americanus
ENSNBRG00000020059	-	89	89.418	ENSVVUG00000022762	DDX17	93	88.402	Vulpes_vulpes
ENSNBRG00000020059	-	92	86.957	ENSXETG00000006900	ddx17	61	89.276	Xenopus_tropicalis
ENSNBRG00000020059	-	88	96.257	ENSXMAG00000005078	si:dkey-156n14.5	63	94.866	Xiphophorus_maculatus