EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000020213 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3556 bases
Position: chrJH422295.1:3109985-3113540
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000026456	RRM_1	PF00076.22	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000027156	-	288	-	ENSNBRP00000026456	95 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000020213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000020213	-	96	62.637	ENSNBRG00000010656	-	68	62.637

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020213	-	92	70.115	ENSG00000153914	SREK1	81	71.605	Homo_sapiens
ENSNBRG00000020213	-	93	80.682	ENSG00000116754	SRSF11	71	78.022	Homo_sapiens
ENSNBRG00000020213	-	93	94.318	ENSAPOG00000007244	-	63	94.318	Acanthochromis_polyacanthus
ENSNBRG00000020213	-	100	86.316	ENSAPOG00000004488	-	87	86.316	Acanthochromis_polyacanthus
ENSNBRG00000020213	-	100	98.947	ENSACIG00000012348	-	100	98.947	Amphilophus_citrinellus
ENSNBRG00000020213	-	100	86.316	ENSACIG00000018075	-	87	86.316	Amphilophus_citrinellus
ENSNBRG00000020213	-	92	64.368	ENSACIG00000015055	-	70	64.368	Amphilophus_citrinellus
ENSNBRG00000020213	-	89	90.805	ENSAOCG00000000739	-	93	90.805	Amphiprion_ocellaris
ENSNBRG00000020213	-	88	66.667	ENSAOCG00000024368	-	85	66.667	Amphiprion_ocellaris
ENSNBRG00000020213	-	91	96.512	ENSAPEG00000003142	SRSF11	88	97.647	Amphiprion_percula
ENSNBRG00000020213	-	100	86.316	ENSAPEG00000003619	SRSF11	87	86.316	Amphiprion_percula
ENSNBRG00000020213	-	86	68.293	ENSAPEG00000002218	-	89	68.293	Amphiprion_percula
ENSNBRG00000020213	-	89	65.882	ENSATEG00000009464	-	93	65.882	Anabas_testudineus
ENSNBRG00000020213	-	100	86.316	ENSATEG00000007534	-	87	86.316	Anabas_testudineus
ENSNBRG00000020213	-	93	92.045	ENSATEG00000011691	srsf11	81	92.045	Anabas_testudineus
ENSNBRG00000020213	-	92	70.115	ENSANAG00000031358	SREK1	81	71.605	Aotus_nancymaae
ENSNBRG00000020213	-	93	96.591	ENSACLG00000000623	srsf11	90	96.591	Astatotilapia_calliptera
ENSNBRG00000020213	-	89	70.588	ENSBTAG00000007321	SREK1	81	71.605	Bos_taurus
ENSNBRG00000020213	-	89	70.588	ENSCJAG00000015950	SREK1	81	71.605	Callithrix_jacchus
ENSNBRG00000020213	-	92	70.115	ENSCAFG00020019449	-	81	71.605	Canis_lupus_dingo
ENSNBRG00000020213	-	91	77.907	ENSCAFG00020017255	-	79	75.281	Canis_lupus_dingo
ENSNBRG00000020213	-	91	77.907	ENSCHIG00000025295	SRSF11	75	75.281	Capra_hircus
ENSNBRG00000020213	-	85	71.605	ENSCHIG00000025052	-	81	71.605	Capra_hircus
ENSNBRG00000020213	-	89	74.118	ENSTSYG00000033270	-	62	71.591	Carlito_syrichta
ENSNBRG00000020213	-	92	70.115	ENSTSYG00000036957	SREK1	81	71.605	Carlito_syrichta
ENSNBRG00000020213	-	92	70.115	ENSCCAG00000020591	SREK1	81	71.605	Cebus_capucinus
ENSNBRG00000020213	-	89	70.588	ENSCATG00000031482	SREK1	81	71.605	Cercocebus_atys
ENSNBRG00000020213	-	87	75.904	ENSCPBG00000022430	-	74	75.904	Chrysemys_picta_bellii
ENSNBRG00000020213	-	92	72.414	ENSCPBG00000026866	SREK1	66	72.414	Chrysemys_picta_bellii
ENSNBRG00000020213	-	89	70.588	ENSCANG00000030421	SREK1	81	71.605	Colobus_angolensis_palliatus
ENSNBRG00000020213	-	89	65.882	ENSCSEG00000013934	-	86	68.421	Cynoglossus_semilaevis
ENSNBRG00000020213	-	96	62.637	ENSCVAG00000002404	-	74	62.637	Cyprinodon_variegatus
ENSNBRG00000020213	-	93	87.500	ENSDARG00000098574	srsf11	97	87.500	Danio_rerio
ENSNBRG00000020213	-	92	68.966	ENSDORG00000023160	-	66	68.966	Dipodomys_ordii
ENSNBRG00000020213	-	92	70.115	ENSEASG00005006832	-	71	71.605	Equus_asinus_asinus
ENSNBRG00000020213	-	91	77.907	ENSEASG00005007847	SRSF11	78	75.281	Equus_asinus_asinus
ENSNBRG00000020213	-	92	70.115	ENSECAG00000035731	-	70	71.605	Equus_caballus
ENSNBRG00000020213	-	85	70.370	ENSFCAG00000036884	-	81	70.370	Felis_catus
ENSNBRG00000020213	-	93	80.682	ENSFCAG00000034448	-	72	78.022	Felis_catus
ENSNBRG00000020213	-	95	62.222	ENSFHEG00000020959	-	70	62.222	Fundulus_heteroclitus
ENSNBRG00000020213	-	89	72.941	ENSGALG00000043541	SREK1	82	74.074	Gallus_gallus
ENSNBRG00000020213	-	87	67.470	ENSGAFG00000001732	-	68	67.470	Gambusia_affinis
ENSNBRG00000020213	-	96	80.220	ENSGAGG00000022411	-	88	80.220	Gopherus_agassizii
ENSNBRG00000020213	-	92	72.414	ENSGAGG00000006087	SREK1	66	72.414	Gopherus_agassizii
ENSNBRG00000020213	-	92	70.115	ENSGGOG00000004737	SREK1	81	71.605	Gorilla_gorilla
ENSNBRG00000020213	-	96	62.637	ENSHBUG00000007082	-	68	62.637	Haplochromis_burtoni
ENSNBRG00000020213	-	93	90.909	ENSHCOG00000016860	-	90	90.909	Hippocampus_comes
ENSNBRG00000020213	-	87	66.265	ENSHCOG00000017228	-	78	65.476	Hippocampus_comes
ENSNBRG00000020213	-	89	70.588	ENSSTOG00000008850	SREK1	81	71.605	Ictidomys_tridecemlineatus
ENSNBRG00000020213	-	92	67.816	ENSJJAG00000008846	-	67	67.816	Jaculus_jaculus
ENSNBRG00000020213	-	92	65.517	ENSLBEG00000022954	-	63	65.517	Labrus_bergylta
ENSNBRG00000020213	-	91	95.349	ENSLBEG00000024167	srsf11	90	93.182	Labrus_bergylta
ENSNBRG00000020213	-	92	70.115	ENSMFAG00000039823	SREK1	81	71.605	Macaca_fascicularis
ENSNBRG00000020213	-	89	70.588	ENSMMUG00000014586	SREK1	75	70.732	Macaca_mulatta
ENSNBRG00000020213	-	89	70.588	ENSMNEG00000030723	SREK1	81	71.605	Macaca_nemestrina
ENSNBRG00000020213	-	89	70.588	ENSMLEG00000039078	SREK1	81	71.605	Mandrillus_leucophaeus
ENSNBRG00000020213	-	88	65.476	ENSMAMG00000003099	-	82	65.476	Mastacembelus_armatus
ENSNBRG00000020213	-	100	86.316	ENSMAMG00000015002	-	88	86.316	Mastacembelus_armatus
ENSNBRG00000020213	-	89	63.529	ENSMZEG00005005707	-	66	63.529	Maylandia_zebra
ENSNBRG00000020213	-	89	70.588	ENSMICG00000034959	SREK1	81	71.605	Microcebus_murinus
ENSNBRG00000020213	-	91	95.349	ENSMMOG00000008877	-	85	95.349	Mola_mola
ENSNBRG00000020213	-	100	86.316	ENSMMOG00000016751	-	87	86.316	Mola_mola
ENSNBRG00000020213	-	93	94.318	ENSMALG00000016608	srsf11	90	94.318	Monopterus_albus
ENSNBRG00000020213	-	91	62.791	ENSMALG00000017086	srek1	92	63.415	Monopterus_albus
ENSNBRG00000020213	-	96	78.022	MGP_CAROLIEiJ_G0025767	Srsf11	91	78.022	Mus_caroli
ENSNBRG00000020213	-	96	78.022	ENSMUSG00000055436	Srsf11	90	78.022	Mus_musculus
ENSNBRG00000020213	-	96	78.022	MGP_PahariEiJ_G0027217	Srsf11	91	78.022	Mus_pahari
ENSNBRG00000020213	-	96	78.022	MGP_SPRETEiJ_G0026719	Srsf11	91	78.022	Mus_spretus
ENSNBRG00000020213	-	92	68.966	ENSNGAG00000014631	-	66	68.966	Nannospalax_galili
ENSNBRG00000020213	-	89	70.588	ENSNLEG00000003827	SREK1	81	71.605	Nomascus_leucogenys
ENSNBRG00000020213	-	92	70.115	ENSODEG00000016218	-	83	68.605	Octodon_degus
ENSNBRG00000020213	-	93	88.636	ENSORLG00000030366	-	79	88.636	Oryzias_latipes
ENSNBRG00000020213	-	88	65.882	ENSORLG00000002711	-	71	65.882	Oryzias_latipes
ENSNBRG00000020213	-	94	87.640	ENSORLG00020009393	-	79	88.636	Oryzias_latipes_hni
ENSNBRG00000020213	-	95	64.444	ENSORLG00020012815	-	69	63.736	Oryzias_latipes_hni
ENSNBRG00000020213	-	94	87.640	ENSORLG00015009374	-	79	88.636	Oryzias_latipes_hsok
ENSNBRG00000020213	-	96	63.736	ENSORLG00015020455	-	72	63.736	Oryzias_latipes_hsok
ENSNBRG00000020213	-	92	70.115	ENSPPAG00000031605	SREK1	75	70.732	Pan_paniscus
ENSNBRG00000020213	-	89	69.412	ENSPPRG00000024617	SREK1	81	70.370	Panthera_pardus
ENSNBRG00000020213	-	89	69.412	ENSPTIG00000006608	SREK1	81	70.370	Panthera_tigris_altaica
ENSNBRG00000020213	-	92	70.115	ENSPTRG00000016936	SREK1	81	71.605	Pan_troglodytes
ENSNBRG00000020213	-	92	70.115	ENSPANG00000008953	SREK1	81	71.605	Papio_anubis
ENSNBRG00000020213	-	100	92.632	ENSPKIG00000021576	-	100	92.632	Paramormyrops_kingsleyae
ENSNBRG00000020213	-	95	87.778	ENSPMGG00000005045	-	79	87.778	Periophthalmus_magnuspinnatus
ENSNBRG00000020213	-	88	66.667	ENSPMGG00000017029	-	73	66.667	Periophthalmus_magnuspinnatus
ENSNBRG00000020213	-	95	88.889	ENSPMGG00000000954	-	85	88.889	Periophthalmus_magnuspinnatus
ENSNBRG00000020213	-	87	67.470	ENSPLAG00000014609	-	61	67.470	Poecilia_latipinna
ENSNBRG00000020213	-	94	87.640	ENSPLAG00000009484	-	61	88.636	Poecilia_latipinna
ENSNBRG00000020213	-	87	67.470	ENSPLAG00000008818	-	61	67.470	Poecilia_latipinna
ENSNBRG00000020213	-	87	67.470	ENSPMEG00000006824	-	61	67.470	Poecilia_mexicana
ENSNBRG00000020213	-	94	87.640	ENSPMEG00000023453	-	61	88.636	Poecilia_mexicana
ENSNBRG00000020213	-	87	67.470	ENSPMEG00000006607	-	61	67.470	Poecilia_mexicana
ENSNBRG00000020213	-	95	90.000	ENSPMEG00000018837	srsf11	74	90.000	Poecilia_mexicana
ENSNBRG00000020213	-	94	65.169	ENSPREG00000019922	-	71	65.169	Poecilia_reticulata
ENSNBRG00000020213	-	92	70.115	ENSPCOG00000026230	SREK1	81	71.605	Propithecus_coquereli
ENSNBRG00000020213	-	96	62.637	ENSPNYG00000007178	-	68	62.637	Pundamilia_nyererei
ENSNBRG00000020213	-	86	80.488	ENSRBIG00000042971	SRSF11	65	78.571	Rhinopithecus_bieti
ENSNBRG00000020213	-	92	70.115	ENSRBIG00000033818	SREK1	81	71.605	Rhinopithecus_bieti
ENSNBRG00000020213	-	89	70.588	ENSRROG00000017210	SREK1	81	71.605	Rhinopithecus_roxellana
ENSNBRG00000020213	-	86	80.488	ENSSBOG00000033461	SRSF11	65	78.571	Saimiri_boliviensis_boliviensis
ENSNBRG00000020213	-	92	70.115	ENSSBOG00000031230	SREK1	81	71.605	Saimiri_boliviensis_boliviensis
ENSNBRG00000020213	-	80	93.421	ENSSFOG00015016086	-	69	93.421	Scleropages_formosus
ENSNBRG00000020213	-	88	65.476	ENSSDUG00000010395	-	83	65.476	Seriola_dumerili
ENSNBRG00000020213	-	88	65.476	ENSSLDG00000016285	-	83	65.476	Seriola_lalandi_dorsalis
ENSNBRG00000020213	-	100	86.316	ENSSLDG00000012105	-	87	86.316	Seriola_lalandi_dorsalis
ENSNBRG00000020213	-	93	94.318	ENSSLDG00000015477	-	90	94.318	Seriola_lalandi_dorsalis
ENSNBRG00000020213	-	94	88.764	ENSSPAG00000016483	-	69	90.698	Stegastes_partitus
ENSNBRG00000020213	-	88	66.667	ENSSPAG00000022310	-	85	66.667	Stegastes_partitus
ENSNBRG00000020213	-	92	62.069	ENSTRUG00000022058	-	71	62.069	Takifugu_rubripes
ENSNBRG00000020213	-	85	81.481	ENSUAMG00000008403	-	65	79.762	Ursus_americanus
ENSNBRG00000020213	-	86	70.732	ENSUAMG00000022662	-	75	70.732	Ursus_americanus
ENSNBRG00000020213	-	92	70.115	ENSVVUG00000005888	-	81	71.605	Vulpes_vulpes
ENSNBRG00000020213	-	87	96.386	ENSXCOG00000003220	-	72	96.386	Xiphophorus_couchianus
ENSNBRG00000020213	-	87	67.470	ENSXCOG00000017792	-	65	67.470	Xiphophorus_couchianus
ENSNBRG00000020213	-	96	87.097	ENSXCOG00000015127	-	100	87.097	Xiphophorus_couchianus
ENSNBRG00000020213	-	94	87.640	ENSXMAG00000019180	SRSF11	58	88.636	Xiphophorus_maculatus
ENSNBRG00000020213	-	87	67.470	ENSXMAG00000028210	-	68	67.470	Xiphophorus_maculatus