EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000020245 (Gene tree)
Gene ID: 102775639
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3295 bases
Position: chrJH422328.1:3900863-3904157
Accession: 102775639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000026502	MMR_HSR1	PF01926.23	5.8e-08	1	1
ENSNBRP00000026516	MMR_HSR1	PF01926.23	7.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000027202	-	2014	-	ENSNBRP00000026502	164 (aa)	-	-
ENSNBRT00000027216	-	1853	XM_006798300	ENSNBRP00000026516	179 (aa)	XP_006798363	UPI0003EC0006

Gene Model

Click here to download ENSNBRG00000020245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000020245	arl5c	100	47.561	ENSNBRG00000011196	-	98	46.591
ENSNBRG00000020245	arl5c	100	48.780	ENSNBRG00000016455	-	98	48.295
ENSNBRG00000020245	arl5c	100	44.848	ENSNBRG00000018854	arf5	98	44.068
ENSNBRG00000020245	arl5c	98	39.157	ENSNBRG00000017591	ARL6	89	38.674
ENSNBRG00000020245	arl5c	100	46.667	ENSNBRG00000016833	-	98	45.763
ENSNBRG00000020245	arl5c	82	34.074	ENSNBRG00000018772	sar1ab	68	34.074
ENSNBRG00000020245	arl5c	95	32.692	ENSNBRG00000010663	arl8a	81	32.692
ENSNBRG00000020245	arl5c	99	39.535	ENSNBRG00000015182	-	92	38.251
ENSNBRG00000020245	arl5c	68	32.479	ENSNBRG00000013507	rab18a	57	32.479
ENSNBRG00000020245	arl5c	99	45.399	ENSNBRG00000019783	arl1	98	44.382
ENSNBRG00000020245	arl5c	100	41.212	ENSNBRG00000007962	arl3	95	39.884
ENSNBRG00000020245	arl5c	92	38.411	ENSNBRG00000010560	arl3l2	88	36.585
ENSNBRG00000020245	arl5c	89	43.506	ENSNBRG00000020745	arl4cb	80	43.125
ENSNBRG00000020245	arl5c	100	71.951	ENSNBRG00000000570	arl5a	98	70.690
ENSNBRG00000020245	arl5c	86	30.496	ENSNBRG00000008013	sar1b	71	30.496
ENSNBRG00000020245	arl5c	89	32.886	ENSNBRG00000004078	arl13b	68	30.588
ENSNBRG00000020245	arl5c	85	33.571	ENSNBRG00000014004	-	71	33.571
ENSNBRG00000020245	arl5c	92	42.384	ENSNBRG00000005929	-	85	40.881
ENSNBRG00000020245	arl5c	86	43.972	ENSNBRG00000006393	arl2	93	42.949
ENSNBRG00000020245	arl5c	100	46.667	ENSNBRG00000017218	arf3b	82	46.821
ENSNBRG00000020245	arl5c	100	40.000	ENSNBRG00000004364	-	94	39.560
ENSNBRG00000020245	arl5c	100	73.780	ENSNBRG00000015782	arl8	97	72.571
ENSNBRG00000020245	arl5c	95	30.128	ENSNBRG00000018737	arl8ba	82	30.128
ENSNBRG00000020245	arl5c	100	47.273	ENSNBRG00000023803	arf2b	98	46.328
ENSNBRG00000020245	arl5c	89	43.791	ENSNBRG00000018555	-	83	42.169
ENSNBRG00000020245	arl5c	95	30.128	ENSNBRG00000023542	arl8bb	82	30.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020245	arl5c	100	90.503	ENSAPOG00000005821	arl5c	100	90.503	Acanthochromis_polyacanthus
ENSNBRG00000020245	arl5c	92	97.561	ENSACIG00000008975	arl5c	91	97.561	Amphilophus_citrinellus
ENSNBRG00000020245	arl5c	100	90.503	ENSAOCG00000010448	arl5c	100	90.503	Amphiprion_ocellaris
ENSNBRG00000020245	arl5c	100	90.503	ENSAPEG00000002699	arl5c	100	90.503	Amphiprion_percula
ENSNBRG00000020245	arl5c	100	88.415	ENSATEG00000000181	arl5c	100	87.709	Anabas_testudineus
ENSNBRG00000020245	arl5c	100	99.441	ENSACLG00000000922	arl5c	100	99.441	Astatotilapia_calliptera
ENSNBRG00000020245	arl5c	100	84.358	ENSAMXG00000031771	arl5c	100	84.358	Astyanax_mexicanus
ENSNBRG00000020245	arl5c	100	84.756	ENSCSEG00000009845	arl5c	100	83.799	Cynoglossus_semilaevis
ENSNBRG00000020245	arl5c	100	92.073	ENSCVAG00000012706	arl5c	99	91.573	Cyprinodon_variegatus
ENSNBRG00000020245	arl5c	100	84.358	ENSDARG00000035719	arl5c	100	84.358	Danio_rerio
ENSNBRG00000020245	arl5c	100	87.805	ENSELUG00000016864	arl5c	100	87.151	Esox_lucius
ENSNBRG00000020245	arl5c	100	92.073	ENSFHEG00000013677	arl5c	100	91.620	Fundulus_heteroclitus
ENSNBRG00000020245	arl5c	100	92.683	ENSGAFG00000002547	arl5c	100	92.179	Gambusia_affinis
ENSNBRG00000020245	arl5c	100	92.683	ENSGACG00000009321	arl5c	100	91.620	Gasterosteus_aculeatus
ENSNBRG00000020245	arl5c	100	99.441	ENSHBUG00000007301	arl5c	100	99.441	Haplochromis_burtoni
ENSNBRG00000020245	arl5c	100	84.146	ENSHCOG00000017576	-	100	83.240	Hippocampus_comes
ENSNBRG00000020245	arl5c	100	84.916	ENSIPUG00000023232	arl5c	100	84.916	Ictalurus_punctatus
ENSNBRG00000020245	arl5c	100	92.073	ENSKMAG00000011323	arl5c	100	91.061	Kryptolebias_marmoratus
ENSNBRG00000020245	arl5c	100	90.503	ENSLBEG00000006177	arl5c	86	90.503	Labrus_bergylta
ENSNBRG00000020245	arl5c	100	89.634	ENSMAMG00000022157	arl5c	100	88.827	Mastacembelus_armatus
ENSNBRG00000020245	arl5c	100	99.441	ENSMZEG00005022925	arl5c	100	99.441	Maylandia_zebra
ENSNBRG00000020245	arl5c	92	95.122	ENSMMOG00000020851	arl5c	96	95.122	Mola_mola
ENSNBRG00000020245	arl5c	92	90.244	ENSMALG00000009306	arl5c	93	90.244	Monopterus_albus
ENSNBRG00000020245	arl5c	100	98.883	ENSONIG00000000890	arl5c	99	98.883	Oreochromis_niloticus
ENSNBRG00000020245	arl5c	100	85.366	ENSORLG00000002960	arl5c	100	85.366	Oryzias_latipes
ENSNBRG00000020245	arl5c	100	85.366	ENSORLG00020010074	arl5c	100	85.366	Oryzias_latipes_hni
ENSNBRG00000020245	arl5c	100	85.366	ENSORLG00015002752	arl5c	100	85.366	Oryzias_latipes_hsok
ENSNBRG00000020245	arl5c	97	86.127	ENSOMEG00000021718	arl5c	98	86.127	Oryzias_melastigma
ENSNBRG00000020245	arl5c	100	87.195	ENSPKIG00000021727	arl5c	100	86.592	Paramormyrops_kingsleyae
ENSNBRG00000020245	arl5c	100	93.296	ENSPFOG00000007842	arl5c	99	93.296	Poecilia_formosa
ENSNBRG00000020245	arl5c	100	93.293	ENSPLAG00000002394	arl5c	100	92.737	Poecilia_latipinna
ENSNBRG00000020245	arl5c	91	93.252	ENSPMEG00000000631	arl5c	94	93.252	Poecilia_mexicana
ENSNBRG00000020245	arl5c	100	93.902	ENSPREG00000008730	arl5c	100	93.855	Poecilia_reticulata
ENSNBRG00000020245	arl5c	100	99.441	ENSPNYG00000012720	arl5c	100	99.441	Pundamilia_nyererei
ENSNBRG00000020245	arl5c	100	83.799	ENSPNAG00000002310	arl5c	100	83.799	Pygocentrus_nattereri
ENSNBRG00000020245	arl5c	100	85.976	ENSSFOG00015023529	arl5c	100	85.475	Scleropages_formosus
ENSNBRG00000020245	arl5c	100	90.503	ENSSMAG00000010552	arl5c	100	90.503	Scophthalmus_maximus
ENSNBRG00000020245	arl5c	100	88.268	ENSSDUG00000022640	arl5c	100	88.268	Seriola_dumerili
ENSNBRG00000020245	arl5c	100	88.268	ENSSLDG00000000728	arl5c	100	88.268	Seriola_lalandi_dorsalis
ENSNBRG00000020245	arl5c	100	90.244	ENSSPAG00000007687	arl5c	100	89.944	Stegastes_partitus
ENSNBRG00000020245	arl5c	100	91.620	ENSTRUG00000022814	arl5c	100	91.620	Takifugu_rubripes
ENSNBRG00000020245	arl5c	100	89.634	ENSTNIG00000003015	arl5c	99	89.385	Tetraodon_nigroviridis
ENSNBRG00000020245	arl5c	100	93.902	ENSXCOG00000017380	arl5c	99	93.820	Xiphophorus_couchianus
ENSNBRG00000020245	arl5c	100	93.293	ENSXMAG00000008447	arl5c	99	93.258	Xiphophorus_maculatus