EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000020595 (Gene tree)
Gene ID
102780716
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Plus strand
Length
24650 bases
Position
chrJH422353.1:1052537-1077186
Accession
102780716
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000027003tRNA_anti-codonPF01336.251.8e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000027711-1692XM_006801615ENSNBRP00000027003563 (aa)XP_006801678-
Gene Model
Click here to download ENSNBRG00000020595's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020595's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000020595rpa19962.081ENSNBRG00000009672RPA19362.081
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000020595rpa19270.136ENSAPOG00000019409RPA17570.136Acanthochromis_polyacanthus
ENSNBRG00000020595rpa19987.722ENSAPOG00000011658rpa110087.722Acanthochromis_polyacanthus
ENSNBRG00000020595rpa19964.138ENSAMEG00000007706RPA19464.138Ailuropoda_melanoleuca
ENSNBRG00000020595rpa110080.877ENSACIG00000007277rpa19980.877Amphilophus_citrinellus
ENSNBRG00000020595rpa19963.103ENSACIG00000012881RPA19963.103Amphilophus_citrinellus
ENSNBRG00000020595rpa19988.750ENSAOCG00000023376rpa110088.750Amphiprion_ocellaris
ENSNBRG00000020595rpa19959.772ENSAOCG00000009003RPA19559.283Amphiprion_ocellaris
ENSNBRG00000020595rpa19271.854ENSAPEG00000019132RPA16671.854Amphiprion_percula
ENSNBRG00000020595rpa19988.770ENSAPEG00000008634rpa110088.770Amphiprion_percula
ENSNBRG00000020595rpa19989.343ENSATEG00000022024rpa19989.343Anabas_testudineus
ENSNBRG00000020595rpa19960.616ENSATEG00000006443RPA19560.616Anabas_testudineus
ENSNBRG00000020595rpa19955.283ENSAPLG00000012442RPA19755.130Anas_platyrhynchos
ENSNBRG00000020595rpa19958.042ENSACAG00000014490RPA19358.566Anolis_carolinensis
ENSNBRG00000020595rpa19964.769ENSANAG00000023456RPA19664.769Aotus_nancymaae
ENSNBRG00000020595rpa19961.983ENSACLG00000005223RPA19561.983Astatotilapia_calliptera
ENSNBRG00000020595rpa19999.641ENSACLG00000006640rpa110099.641Astatotilapia_calliptera
ENSNBRG00000020595rpa19978.966ENSAMXG00000008418rpa19878.966Astyanax_mexicanus
ENSNBRG00000020595rpa19963.448ENSBTAG00000009711RPA19463.448Bos_taurus
ENSNBRG00000020595rpa17633.638WBGene00017546rpa-16533.638Caenorhabditis_elegans
ENSNBRG00000020595rpa19962.241ENSCJAG00000001848RPA19462.586Callithrix_jacchus
ENSNBRG00000020595rpa19962.862ENSCAFG00000019249RPA19463.032Canis_familiaris
ENSNBRG00000020595rpa19962.862ENSCAFG00020009847RPA19463.032Canis_lupus_dingo
ENSNBRG00000020595rpa19963.966ENSCHIG00000026308RPA19463.966Capra_hircus
ENSNBRG00000020595rpa19963.621ENSTSYG00000003482-9463.621Carlito_syrichta
ENSNBRG00000020595rpa19963.793ENSCPOG00000000035RPA19463.793Cavia_porcellus
ENSNBRG00000020595rpa19952.144ENSCCAG00000010981RPA19452.487Cebus_capucinus
ENSNBRG00000020595rpa19959.240ENSCLAG00000015045-9459.240Chinchilla_lanigera
ENSNBRG00000020595rpa19963.103ENSCLAG00000005185-9463.103Chinchilla_lanigera
ENSNBRG00000020595rpa19953.173ENSCSAG00000013833RPA19454.031Chlorocebus_sabaeus
ENSNBRG00000020595rpa19962.694ENSCHOG00000013540-9862.694Choloepus_hoffmanni
ENSNBRG00000020595rpa17771.330ENSCHOG00000009454-9971.330Choloepus_hoffmanni
ENSNBRG00000020595rpa19964.879ENSCPBG00000020377RPA19964.613Chrysemys_picta_bellii
ENSNBRG00000020595rpa19944.056ENSCING00000023482-9444.056Ciona_intestinalis
ENSNBRG00000020595rpa19965.836ENSCANG00000030911RPA19665.836Colobus_angolensis_palliatus
ENSNBRG00000020595rpa19963.402ENSCGRG00001008197Rpa19463.402Cricetulus_griseus_chok1gshd
ENSNBRG00000020595rpa18069.757ENSCGRG00000000582Rpa18969.757Cricetulus_griseus_crigri
ENSNBRG00000020595rpa19980.783ENSCSEG00000013066rpa19680.783Cynoglossus_semilaevis
ENSNBRG00000020595rpa19956.566ENSCSEG00000012726RPA19956.997Cynoglossus_semilaevis
ENSNBRG00000020595rpa19984.146ENSCVAG00000019431rpa19985.045Cyprinodon_variegatus
ENSNBRG00000020595rpa18871.498ENSCVAG00000013446-7471.498Cyprinodon_variegatus
ENSNBRG00000020595rpa19975.923ENSDARG00000003938rpa19575.923Danio_rerio
ENSNBRG00000020595rpa19964.483ENSDNOG00000017218RPA19464.483Dasypus_novemcinctus
ENSNBRG00000020595rpa19964.421ENSDORG00000006199Rpa19663.790Dipodomys_ordii
ENSNBRG00000020595rpa19842.124FBgn0010173RpA-709342.681Drosophila_melanogaster
ENSNBRG00000020595rpa18174.227ENSETEG00000017608RPA17774.227Echinops_telfairi
ENSNBRG00000020595rpa19965.536ENSEASG00005009372RPA19965.714Equus_asinus_asinus
ENSNBRG00000020595rpa19963.903ENSECAG00000023886RPA19463.903Equus_caballus
ENSNBRG00000020595rpa17470.883ENSEEUG00000002186-6870.883Erinaceus_europaeus
ENSNBRG00000020595rpa19364.595ENSELUG00000006136RPA19964.595Esox_lucius
ENSNBRG00000020595rpa19980.420ENSELUG00000021071rpa19480.420Esox_lucius
ENSNBRG00000020595rpa19964.138ENSFCAG00000006306RPA19464.138Felis_catus
ENSNBRG00000020595rpa19963.731ENSFALG00000006575RPA19463.731Ficedula_albicollis
ENSNBRG00000020595rpa19964.249ENSFDAG00000007720RPA19464.249Fukomys_damarensis
ENSNBRG00000020595rpa19983.421ENSFHEG00000003580rpa19583.421Fundulus_heteroclitus
ENSNBRG00000020595rpa19978.393ENSGMOG00000010382rpa19478.393Gadus_morhua
ENSNBRG00000020595rpa19962.912ENSGALG00000003072RPA19462.912Gallus_gallus
ENSNBRG00000020595rpa19983.779ENSGAFG00000012916rpa19683.779Gambusia_affinis
ENSNBRG00000020595rpa19959.612ENSGAFG00000020953RPA19560.258Gambusia_affinis
ENSNBRG00000020595rpa19983.012ENSGACG00000010856rpa19583.012Gasterosteus_aculeatus
ENSNBRG00000020595rpa19964.533ENSGAGG00000013611RPA19464.533Gopherus_agassizii
ENSNBRG00000020595rpa19965.597ENSGGOG00000014186RPA19465.597Gorilla_gorilla
ENSNBRG00000020595rpa110099.467ENSHBUG00000017773rpa19599.467Haplochromis_burtoni
ENSNBRG00000020595rpa19959.051ENSHBUG00000009348RPA19759.051Haplochromis_burtoni
ENSNBRG00000020595rpa19963.385ENSHGLG00000008846RPA19463.385Heterocephalus_glaber_female
ENSNBRG00000020595rpa19954.231ENSHGLG00100002005-9354.404Heterocephalus_glaber_male
ENSNBRG00000020595rpa19963.385ENSHGLG00100017755-9463.385Heterocephalus_glaber_male
ENSNBRG00000020595rpa19959.240ENSHGLG00100000799-9459.240Heterocephalus_glaber_male
ENSNBRG00000020595rpa19973.150ENSHCOG00000001401rpa19573.666Hippocampus_comes
ENSNBRG00000020595rpa19946.441ENSHCOG00000000351RPA19346.277Hippocampus_comes
ENSNBRG00000020595rpa19977.043ENSIPUG00000004400rpa19577.043Ictalurus_punctatus
ENSNBRG00000020595rpa19662.081ENSSTOG00000022475RPA19562.081Ictidomys_tridecemlineatus
ENSNBRG00000020595rpa19963.621ENSJJAG00000000876Rpa19763.621Jaculus_jaculus
ENSNBRG00000020595rpa19981.315ENSKMAG00000005605rpa19581.488Kryptolebias_marmoratus
ENSNBRG00000020595rpa19961.888ENSKMAG00000000234RPA19461.888Kryptolebias_marmoratus
ENSNBRG00000020595rpa19371.560ENSLBEG00000002281RPA17671.560Labrus_bergylta
ENSNBRG00000020595rpa19983.481ENSLBEG00000021604rpa19583.481Labrus_bergylta
ENSNBRG00000020595rpa18263.656ENSLACG00000007210RPA19463.656Latimeria_chalumnae
ENSNBRG00000020595rpa19973.043ENSLOCG00000006397rpa19473.217Lepisosteus_oculatus
ENSNBRG00000020595rpa19963.265ENSLAFG00000015354RPA19463.265Loxodonta_africana
ENSNBRG00000020595rpa18261.203ENSMFAG00000036138-9561.826Macaca_fascicularis
ENSNBRG00000020595rpa19959.304ENSMMUG00000002442-9459.304Macaca_mulatta
ENSNBRG00000020595rpa19963.966ENSMMUG00000011604-9664.483Macaca_mulatta
ENSNBRG00000020595rpa19957.726ENSMNEG00000029837-9357.726Macaca_nemestrina
ENSNBRG00000020595rpa19963.276ENSMNEG00000031632-9763.793Macaca_nemestrina
ENSNBRG00000020595rpa19960.549ENSMLEG00000038768-9660.892Mandrillus_leucophaeus
ENSNBRG00000020595rpa19988.036ENSMAMG00000017993rpa19988.036Mastacembelus_armatus
ENSNBRG00000020595rpa19371.860ENSMAMG00000020097RPA17971.330Mastacembelus_armatus
ENSNBRG00000020595rpa19961.983ENSMZEG00005024731RPA19561.983Maylandia_zebra
ENSNBRG00000020595rpa110095.096ENSMZEG00005007551rpa19595.096Maylandia_zebra
ENSNBRG00000020595rpa19962.912ENSMGAG00000005315RPA19462.912Meleagris_gallopavo
ENSNBRG00000020595rpa19963.432ENSMAUG00000010474Rpa19663.778Mesocricetus_auratus
ENSNBRG00000020595rpa19963.951ENSMICG00000012867RPA19463.951Microcebus_murinus
ENSNBRG00000020595rpa19963.040ENSMOCG00000013019Rpa19463.040Microtus_ochrogaster
ENSNBRG00000020595rpa19984.155ENSMMOG00000014292rpa19884.155Mola_mola
ENSNBRG00000020595rpa19964.476ENSMMOG00000010868RPA19464.476Mola_mola
ENSNBRG00000020595rpa19962.995ENSMODG00000010549RPA19462.995Monodelphis_domestica
ENSNBRG00000020595rpa19987.478ENSMALG00000011453rpa19587.478Monopterus_albus
ENSNBRG00000020595rpa19672.540ENSMALG00000001208RPA17672.540Monopterus_albus
ENSNBRG00000020595rpa19963.103MGP_CAROLIEiJ_G0016734Rpa19463.103Mus_caroli
ENSNBRG00000020595rpa19962.628ENSMUSG00000000751Rpa19462.799Mus_musculus
ENSNBRG00000020595rpa19963.293MGP_PahariEiJ_G0017871Rpa19463.293Mus_pahari
ENSNBRG00000020595rpa19962.521MGP_SPRETEiJ_G0017577Rpa19462.692Mus_spretus
ENSNBRG00000020595rpa19964.421ENSMPUG00000013119RPA19464.421Mustela_putorius_furo
ENSNBRG00000020595rpa19963.058ENSMLUG00000006113RPA19363.058Myotis_lucifugus
ENSNBRG00000020595rpa19963.793ENSNGAG00000004522Rpa19363.793Nannospalax_galili
ENSNBRG00000020595rpa19963.385ENSNLEG00000017149RPA19463.385Nomascus_leucogenys
ENSNBRG00000020595rpa19954.750ENSMEUG00000006714RPA19554.750Notamacropus_eugenii
ENSNBRG00000020595rpa19962.139ENSODEG00000009038RPA19562.139Octodon_degus
ENSNBRG00000020595rpa110092.624ENSONIG00000013135rpa19592.624Oreochromis_niloticus
ENSNBRG00000020595rpa19964.716ENSOANG00000010880RPA19664.716Ornithorhynchus_anatinus
ENSNBRG00000020595rpa19960.984ENSOCUG00000001504RPA19460.984Oryctolagus_cuniculus
ENSNBRG00000020595rpa19957.189ENSORLG00000003368RPA19557.189Oryzias_latipes
ENSNBRG00000020595rpa19984.480ENSORLG00000004856rpa19584.480Oryzias_latipes
ENSNBRG00000020595rpa19467.556ENSORLG00020015284RPA18067.556Oryzias_latipes_hni
ENSNBRG00000020595rpa19984.656ENSORLG00020008980rpa19584.656Oryzias_latipes_hni
ENSNBRG00000020595rpa19984.656ENSORLG00015013982rpa19584.656Oryzias_latipes_hsok
ENSNBRG00000020595rpa17566.432ENSORLG00015005867-9766.432Oryzias_latipes_hsok
ENSNBRG00000020595rpa19958.717ENSORLG00015020383RPA19458.717Oryzias_latipes_hsok
ENSNBRG00000020595rpa19980.071ENSOMEG00000004704rpa19580.071Oryzias_melastigma
ENSNBRG00000020595rpa19960.816ENSOMEG00000011040RPA19960.816Oryzias_melastigma
ENSNBRG00000020595rpa19963.385ENSOGAG00000005581-9463.385Otolemur_garnettii
ENSNBRG00000020595rpa17375.275ENSOGAG00000029379-9175.275Otolemur_garnettii
ENSNBRG00000020595rpa19963.966ENSOARG00000014479RPA19463.966Ovis_aries
ENSNBRG00000020595rpa19963.385ENSPPAG00000039680RPA19463.731Pan_paniscus
ENSNBRG00000020595rpa19963.966ENSPPRG00000011807RPA19463.966Panthera_pardus
ENSNBRG00000020595rpa19963.966ENSPTIG00000007898RPA19463.966Panthera_tigris_altaica
ENSNBRG00000020595rpa19963.731ENSPTRG00000008539RPA19464.076Pan_troglodytes
ENSNBRG00000020595rpa19963.793ENSPANG00000024592RPA19464.310Papio_anubis
ENSNBRG00000020595rpa19973.611ENSPKIG00000008053rpa19473.611Paramormyrops_kingsleyae
ENSNBRG00000020595rpa19964.533ENSPSIG00000015617RPA19664.533Pelodiscus_sinensis
ENSNBRG00000020595rpa19985.179ENSPMGG00000011589rpa19785.179Periophthalmus_magnuspinnatus
ENSNBRG00000020595rpa19961.879ENSPMGG00000000543RPA19961.871Periophthalmus_magnuspinnatus
ENSNBRG00000020595rpa19963.432ENSPEMG00000021061Rpa19463.605Peromyscus_maniculatus_bairdii
ENSNBRG00000020595rpa19963.167ENSPCIG00000019049RPA19462.651Phascolarctos_cinereus
ENSNBRG00000020595rpa19984.007ENSPFOG00000003987rpa19584.007Poecilia_formosa
ENSNBRG00000020595rpa19983.831ENSPLAG00000004984rpa19583.831Poecilia_latipinna
ENSNBRG00000020595rpa19360.103ENSPLAG00000008844-9160.103Poecilia_latipinna
ENSNBRG00000020595rpa19358.076ENSPMEG00000003627-9159.622Poecilia_mexicana
ENSNBRG00000020595rpa19984.183ENSPMEG00000020602rpa19983.601Poecilia_mexicana
ENSNBRG00000020595rpa19271.625ENSPREG00000010119RPA17771.625Poecilia_reticulata
ENSNBRG00000020595rpa19476.075ENSPREG00000010174rpa19176.075Poecilia_reticulata
ENSNBRG00000020595rpa19964.298ENSPCOG00000001799RPA19464.298Propithecus_coquereli
ENSNBRG00000020595rpa19962.867ENSPVAG00000002149RPA19462.867Pteropus_vampyrus
ENSNBRG00000020595rpa19961.818ENSPNYG00000024165RPA19561.818Pundamilia_nyererei
ENSNBRG00000020595rpa19999.642ENSPNYG00000016316rpa110099.642Pundamilia_nyererei
ENSNBRG00000020595rpa19969.772ENSPNAG00000008599rpa19669.755Pygocentrus_nattereri
ENSNBRG00000020595rpa19970.388ENSRNOG00000003123Rpa19463.951Rattus_norvegicus
ENSNBRG00000020595rpa19964.138ENSRBIG00000036587RPA19464.138Rhinopithecus_bieti
ENSNBRG00000020595rpa19958.966ENSRROG00000043278RPA19458.966Rhinopithecus_roxellana
ENSNBRG00000020595rpa17936.444YAR007CRFA17236.444Saccharomyces_cerevisiae
ENSNBRG00000020595rpa19663.571ENSSBOG00000030233RPA19763.571Saimiri_boliviensis_boliviensis
ENSNBRG00000020595rpa19963.746ENSSHAG00000007969RPA19463.746Sarcophilus_harrisii
ENSNBRG00000020595rpa19980.702ENSSFOG00015005362rpa18780.702Scleropages_formosus
ENSNBRG00000020595rpa19371.689ENSSMAG00000019746RPA17971.689Scophthalmus_maximus
ENSNBRG00000020595rpa19172.454ENSSDUG00000016358RPA17672.146Seriola_dumerili
ENSNBRG00000020595rpa19988.592ENSSDUG00000011949rpa19588.592Seriola_dumerili
ENSNBRG00000020595rpa19988.948ENSSLDG00000011806rpa19588.948Seriola_lalandi_dorsalis
ENSNBRG00000020595rpa19171.759ENSSLDG00000020784RPA17671.461Seriola_lalandi_dorsalis
ENSNBRG00000020595rpa18878.788ENSSARG00000007506RPA18578.788Sorex_araneus
ENSNBRG00000020595rpa19962.261ENSSPUG00000007223RPA19662.261Sphenodon_punctatus
ENSNBRG00000020595rpa19987.676ENSSPAG00000009903rpa19587.676Stegastes_partitus
ENSNBRG00000020595rpa19965.419ENSSPAG00000011165RPA19665.187Stegastes_partitus
ENSNBRG00000020595rpa19965.125ENSSSCG00000017822RPA19663.966Sus_scrofa
ENSNBRG00000020595rpa19963.432ENSTGUG00000005775RPA19463.432Taeniopygia_guttata
ENSNBRG00000020595rpa19982.509ENSTRUG00000003616rpa19482.509Takifugu_rubripes
ENSNBRG00000020595rpa19171.262ENSTRUG00000000405RPA17370.872Takifugu_rubripes
ENSNBRG00000020595rpa19982.699ENSTNIG00000016199rpa19482.986Tetraodon_nigroviridis
ENSNBRG00000020595rpa17870.909ENSTBEG00000002709RPA17470.909Tupaia_belangeri
ENSNBRG00000020595rpa19962.069ENSTTRG00000001169RPA19462.759Tursiops_truncatus
ENSNBRG00000020595rpa19865.957ENSUAMG00000015676RPA19375.000Ursus_americanus
ENSNBRG00000020595rpa19965.419ENSUMAG00000009328RPA19465.419Ursus_maritimus
ENSNBRG00000020595rpa19962.759ENSVPAG00000009443RPA19462.759Vicugna_pacos
ENSNBRG00000020595rpa19963.385ENSVVUG00000021715RPA19463.731Vulpes_vulpes
ENSNBRG00000020595rpa19967.422ENSXETG00000013538rpa19467.073Xenopus_tropicalis
ENSNBRG00000020595rpa19482.617ENSXCOG00000010068rpa19382.617Xiphophorus_couchianus
ENSNBRG00000020595rpa19963.929ENSXCOG00000009899-9963.929Xiphophorus_couchianus
ENSNBRG00000020595rpa19982.250ENSXMAG00000004102rpa19982.079Xiphophorus_maculatus
ENSNBRG00000020595rpa19271.854ENSXMAG00000010333RPA17471.854Xiphophorus_maculatus

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