EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000020728 (Gene tree)
Gene ID: 102789918
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: pre-rRNA-processing protein TSR1 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 11531 bases
Position: chrJH422353.1:1453796-1465326
Accession: 102789918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027202	AARP2CN	PF08142.12	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000027915	-	2571	XM_006801559	ENSNBRP00000027202	835 (aa)	XP_006801622	UPI0003EC0CFC

Gene Model

Click here to download ENSNBRG00000020728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020728	tsr1	97	55.407	ENSG00000167721	TSR1	98	55.407	Homo_sapiens
ENSNBRG00000020728	tsr1	99	88.876	ENSAPOG00000020891	tsr1	100	89.474	Acanthochromis_polyacanthus
ENSNBRG00000020728	tsr1	99	54.317	ENSAMEG00000007599	TSR1	99	53.635	Ailuropoda_melanoleuca
ENSNBRG00000020728	tsr1	99	90.144	ENSACIG00000007090	tsr1	100	89.904	Amphilophus_citrinellus
ENSNBRG00000020728	tsr1	99	87.995	ENSAOCG00000023284	tsr1	100	88.715	Amphiprion_ocellaris
ENSNBRG00000020728	tsr1	93	87.629	ENSAPEG00000008452	tsr1	100	88.402	Amphiprion_percula
ENSNBRG00000020728	tsr1	99	86.174	ENSATEG00000021961	tsr1	100	87.366	Anabas_testudineus
ENSNBRG00000020728	tsr1	90	59.240	ENSAPLG00000013422	TSR1	100	57.778	Anas_platyrhynchos
ENSNBRG00000020728	tsr1	71	51.424	ENSACAG00000000859	TSR1	92	50.580	Anolis_carolinensis
ENSNBRG00000020728	tsr1	97	55.122	ENSANAG00000031071	TSR1	98	55.488	Aotus_nancymaae
ENSNBRG00000020728	tsr1	100	97.844	ENSACLG00000007595	tsr1	100	97.844	Astatotilapia_calliptera
ENSNBRG00000020728	tsr1	50	75.952	ENSAMXG00000008470	tsr1	90	75.587	Astyanax_mexicanus
ENSNBRG00000020728	tsr1	98	55.942	ENSBTAG00000004225	TSR1	99	55.582	Bos_taurus
ENSNBRG00000020728	tsr1	96	38.631	WBGene00006497	tag-151	96	38.556	Caenorhabditis_elegans
ENSNBRG00000020728	tsr1	97	54.446	ENSCJAG00000012456	TSR1	98	54.811	Callithrix_jacchus
ENSNBRG00000020728	tsr1	89	52.918	ENSCAFG00000019273	-	100	56.604	Canis_familiaris
ENSNBRG00000020728	tsr1	99	55.048	ENSCAFG00000002106	-	99	55.012	Canis_familiaris
ENSNBRG00000020728	tsr1	99	54.928	ENSCAFG00020009728	TSR1	99	54.893	Canis_lupus_dingo
ENSNBRG00000020728	tsr1	99	56.333	ENSCHIG00000023935	TSR1	99	56.130	Capra_hircus
ENSNBRG00000020728	tsr1	99	55.904	ENSTSYG00000005468	TSR1	99	55.649	Carlito_syrichta
ENSNBRG00000020728	tsr1	92	55.137	ENSCPOG00000014833	TSR1	99	55.181	Cavia_porcellus
ENSNBRG00000020728	tsr1	92	53.558	ENSCCAG00000028962	TSR1	98	53.946	Cebus_capucinus
ENSNBRG00000020728	tsr1	97	54.788	ENSCATG00000044262	TSR1	99	55.152	Cercocebus_atys
ENSNBRG00000020728	tsr1	99	55.314	ENSCLAG00000005567	TSR1	99	55.702	Chinchilla_lanigera
ENSNBRG00000020728	tsr1	97	54.909	ENSCSAG00000013788	TSR1	99	55.273	Chlorocebus_sabaeus
ENSNBRG00000020728	tsr1	98	56.501	ENSCPBG00000020363	TSR1	97	56.235	Chrysemys_picta_bellii
ENSNBRG00000020728	tsr1	96	44.308	ENSCING00000020658	-	99	43.415	Ciona_intestinalis
ENSNBRG00000020728	tsr1	95	44.089	ENSCSAVG00000001875	-	100	43.966	Ciona_savignyi
ENSNBRG00000020728	tsr1	97	49.757	ENSCANG00000033056	TSR1	96	69.360	Colobus_angolensis_palliatus
ENSNBRG00000020728	tsr1	99	53.670	ENSCGRG00001023942	Tsr1	99	54.187	Cricetulus_griseus_chok1gshd
ENSNBRG00000020728	tsr1	99	80.672	ENSCSEG00000013009	tsr1	100	81.393	Cynoglossus_semilaevis
ENSNBRG00000020728	tsr1	99	84.375	ENSCVAG00000000506	tsr1	100	84.375	Cyprinodon_variegatus
ENSNBRG00000020728	tsr1	99	75.416	ENSDARG00000007744	tsr1	100	75.891	Danio_rerio
ENSNBRG00000020728	tsr1	99	56.490	ENSDNOG00000004715	TSR1	99	57.525	Dasypus_novemcinctus
ENSNBRG00000020728	tsr1	99	55.314	ENSDORG00000016371	-	99	54.633	Dipodomys_ordii
ENSNBRG00000020728	tsr1	95	48.750	ENSDORG00000023234	-	99	48.070	Dipodomys_ordii
ENSNBRG00000020728	tsr1	96	43.447	FBgn0037073	Tsr1	96	44.010	Drosophila_melanogaster
ENSNBRG00000020728	tsr1	89	67.213	ENSETEG00000017534	TSR1	89	67.213	Echinops_telfairi
ENSNBRG00000020728	tsr1	95	51.950	ENSEBUG00000013731	TSR1	98	50.818	Eptatretus_burgeri
ENSNBRG00000020728	tsr1	99	55.226	ENSEASG00005009302	TSR1	97	55.649	Equus_asinus_asinus
ENSNBRG00000020728	tsr1	99	55.529	ENSECAG00000009114	TSR1	99	55.582	Equus_caballus
ENSNBRG00000020728	tsr1	100	75.627	ENSELUG00000020984	tsr1	96	75.627	Esox_lucius
ENSNBRG00000020728	tsr1	99	54.217	ENSFCAG00000006313	TSR1	99	54.796	Felis_catus
ENSNBRG00000020728	tsr1	99	57.688	ENSFALG00000006532	TSR1	99	57.330	Ficedula_albicollis
ENSNBRG00000020728	tsr1	99	55.181	ENSFDAG00000006038	TSR1	99	54.982	Fukomys_damarensis
ENSNBRG00000020728	tsr1	100	83.313	ENSFHEG00000003626	tsr1	100	83.552	Fundulus_heteroclitus
ENSNBRG00000020728	tsr1	99	72.608	ENSGMOG00000010336	tsr1	100	73.325	Gadus_morhua
ENSNBRG00000020728	tsr1	100	84.349	ENSGAFG00000012993	tsr1	100	82.557	Gambusia_affinis
ENSNBRG00000020728	tsr1	99	81.764	ENSGACG00000010843	tsr1	100	81.049	Gasterosteus_aculeatus
ENSNBRG00000020728	tsr1	98	56.136	ENSGAGG00000025619	-	99	55.060	Gopherus_agassizii
ENSNBRG00000020728	tsr1	97	55.650	ENSGGOG00000001704	TSR1	98	55.650	Gorilla_gorilla
ENSNBRG00000020728	tsr1	100	98.323	ENSHBUG00000017904	tsr1	100	98.323	Haplochromis_burtoni
ENSNBRG00000020728	tsr1	99	56.235	ENSHGLG00000012806	-	99	56.115	Heterocephalus_glaber_female
ENSNBRG00000020728	tsr1	96	48.639	ENSHGLG00000015688	-	98	48.515	Heterocephalus_glaber_female
ENSNBRG00000020728	tsr1	99	56.235	ENSHGLG00100015392	TSR1	99	56.115	Heterocephalus_glaber_male
ENSNBRG00000020728	tsr1	99	80.889	ENSHCOG00000001432	tsr1	100	80.769	Hippocampus_comes
ENSNBRG00000020728	tsr1	99	74.821	ENSIPUG00000004618	tsr1	100	75.060	Ictalurus_punctatus
ENSNBRG00000020728	tsr1	99	56.355	ENSSTOG00000011819	TSR1	99	55.635	Ictidomys_tridecemlineatus
ENSNBRG00000020728	tsr1	91	53.072	ENSJJAG00000019505	Tsr1	95	52.157	Jaculus_jaculus
ENSNBRG00000020728	tsr1	100	84.450	ENSKMAG00000005763	tsr1	100	86.842	Kryptolebias_marmoratus
ENSNBRG00000020728	tsr1	100	86.038	ENSLBEG00000021823	tsr1	100	86.396	Labrus_bergylta
ENSNBRG00000020728	tsr1	99	58.038	ENSLACG00000002197	TSR1	100	58.145	Latimeria_chalumnae
ENSNBRG00000020728	tsr1	91	77.632	ENSLOCG00000006491	TSR1	99	77.632	Lepisosteus_oculatus
ENSNBRG00000020728	tsr1	99	54.676	ENSMFAG00000021330	TSR1	99	55.394	Macaca_fascicularis
ENSNBRG00000020728	tsr1	99	54.556	ENSMMUG00000017519	TSR1	99	55.273	Macaca_mulatta
ENSNBRG00000020728	tsr1	99	54.676	ENSMNEG00000031382	TSR1	99	55.394	Macaca_nemestrina
ENSNBRG00000020728	tsr1	97	54.667	ENSMLEG00000036733	TSR1	99	55.030	Mandrillus_leucophaeus
ENSNBRG00000020728	tsr1	100	85.392	ENSMAMG00000017918	tsr1	100	85.986	Mastacembelus_armatus
ENSNBRG00000020728	tsr1	99	97.002	ENSMZEG00005007477	tsr1	100	97.002	Maylandia_zebra
ENSNBRG00000020728	tsr1	99	56.973	ENSMGAG00000005576	TSR1	100	56.615	Meleagris_gallopavo
ENSNBRG00000020728	tsr1	99	56.092	ENSMICG00000012943	TSR1	99	55.889	Microcebus_murinus
ENSNBRG00000020728	tsr1	99	54.447	ENSMOCG00000022764	Tsr1	99	53.966	Microtus_ochrogaster
ENSNBRG00000020728	tsr1	99	85.474	ENSMMOG00000014280	tsr1	100	86.074	Mola_mola
ENSNBRG00000020728	tsr1	98	56.870	ENSMODG00000010658	TSR1	99	56.973	Monodelphis_domestica
ENSNBRG00000020728	tsr1	99	87.650	ENSMALG00000011681	tsr1	100	87.650	Monopterus_albus
ENSNBRG00000020728	tsr1	99	54.272	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.132	Mus_caroli
ENSNBRG00000020728	tsr1	99	54.994	ENSMUSG00000038335	Tsr1	99	54.850	Mus_musculus
ENSNBRG00000020728	tsr1	99	55.355	MGP_PahariEiJ_G0017864	Tsr1	99	55.090	Mus_pahari
ENSNBRG00000020728	tsr1	99	54.874	MGP_SPRETEiJ_G0017570	Tsr1	99	54.731	Mus_spretus
ENSNBRG00000020728	tsr1	81	57.664	ENSMPUG00000013000	TSR1	100	57.536	Mustela_putorius_furo
ENSNBRG00000020728	tsr1	99	55.355	ENSMLUG00000003505	TSR1	99	55.755	Myotis_lucifugus
ENSNBRG00000020728	tsr1	97	49.817	ENSNLEG00000017184	TSR1	94	67.160	Nomascus_leucogenys
ENSNBRG00000020728	tsr1	98	52.512	ENSMEUG00000015828	TSR1	99	53.389	Notamacropus_eugenii
ENSNBRG00000020728	tsr1	99	94.681	ENSONIG00000013131	tsr1	100	94.681	Oreochromis_niloticus
ENSNBRG00000020728	tsr1	99	55.730	ENSOCUG00000014256	TSR1	99	55.529	Oryctolagus_cuniculus
ENSNBRG00000020728	tsr1	100	85.287	ENSORLG00000004926	tsr1	100	85.048	Oryzias_latipes
ENSNBRG00000020728	tsr1	100	85.167	ENSORLG00020008792	tsr1	100	84.809	Oryzias_latipes_hni
ENSNBRG00000020728	tsr1	100	85.407	ENSORLG00015013838	tsr1	100	85.167	Oryzias_latipes_hsok
ENSNBRG00000020728	tsr1	100	85.185	ENSOMEG00000004830	tsr1	100	85.424	Oryzias_melastigma
ENSNBRG00000020728	tsr1	99	54.221	ENSOGAG00000004492	TSR1	99	54.697	Otolemur_garnettii
ENSNBRG00000020728	tsr1	99	56.401	ENSOARG00000015437	TSR1	97	56.197	Ovis_aries
ENSNBRG00000020728	tsr1	97	55.407	ENSPPAG00000036355	TSR1	98	55.407	Pan_paniscus
ENSNBRG00000020728	tsr1	99	54.458	ENSPPRG00000015519	-	99	54.317	Panthera_pardus
ENSNBRG00000020728	tsr1	99	54.578	ENSPTIG00000010608	TSR1	99	54.436	Panthera_tigris_altaica
ENSNBRG00000020728	tsr1	97	55.407	ENSPTRG00000008547	TSR1	98	55.407	Pan_troglodytes
ENSNBRG00000020728	tsr1	97	52.184	ENSPANG00000024463	TSR1	99	53.034	Papio_anubis
ENSNBRG00000020728	tsr1	99	73.174	ENSPKIG00000013972	tsr1	100	73.086	Paramormyrops_kingsleyae
ENSNBRG00000020728	tsr1	87	57.221	ENSPSIG00000018258	TSR1	99	55.918	Pelodiscus_sinensis
ENSNBRG00000020728	tsr1	99	81.928	ENSPMGG00000011577	tsr1	99	81.807	Periophthalmus_magnuspinnatus
ENSNBRG00000020728	tsr1	99	53.957	ENSPEMG00000018033	Tsr1	99	54.022	Peromyscus_maniculatus_bairdii
ENSNBRG00000020728	tsr1	98	57.313	ENSPCIG00000009357	TSR1	97	56.956	Phascolarctos_cinereus
ENSNBRG00000020728	tsr1	99	82.874	ENSPFOG00000004483	TSR1	100	84.671	Poecilia_formosa
ENSNBRG00000020728	tsr1	100	83.433	ENSPLAG00000022320	tsr1	100	84.863	Poecilia_latipinna
ENSNBRG00000020728	tsr1	100	83.433	ENSPMEG00000004577	tsr1	100	84.982	Poecilia_mexicana
ENSNBRG00000020728	tsr1	97	84.417	ENSPREG00000010354	tsr1	97	83.676	Poecilia_reticulata
ENSNBRG00000020728	tsr1	97	50.544	ENSPPYG00000007792	TSR1	98	50.907	Pongo_abelii
ENSNBRG00000020728	tsr1	51	62.791	ENSPCAG00000012973	-	70	63.415	Procavia_capensis
ENSNBRG00000020728	tsr1	99	55.489	ENSPCOG00000017928	TSR1	99	55.783	Propithecus_coquereli
ENSNBRG00000020728	tsr1	99	55.235	ENSPVAG00000002162	TSR1	99	54.916	Pteropus_vampyrus
ENSNBRG00000020728	tsr1	100	97.844	ENSPNYG00000016163	tsr1	100	97.844	Pundamilia_nyererei
ENSNBRG00000020728	tsr1	99	76.071	ENSPNAG00000008659	tsr1	100	76.071	Pygocentrus_nattereri
ENSNBRG00000020728	tsr1	99	54.710	ENSRNOG00000002980	Tsr1	99	54.272	Rattus_norvegicus
ENSNBRG00000020728	tsr1	99	54.916	ENSRBIG00000040016	TSR1	99	54.958	Rhinopithecus_bieti
ENSNBRG00000020728	tsr1	99	54.676	ENSRROG00000030361	TSR1	99	54.719	Rhinopithecus_roxellana
ENSNBRG00000020728	tsr1	97	55.650	ENSSBOG00000020785	TSR1	98	55.636	Saimiri_boliviensis_boliviensis
ENSNBRG00000020728	tsr1	98	57.572	ENSSHAG00000011394	TSR1	99	57.332	Sarcophilus_harrisii
ENSNBRG00000020728	tsr1	99	75.721	ENSSFOG00015005455	tsr1	100	75.300	Scleropages_formosus
ENSNBRG00000020728	tsr1	99	85.731	ENSSMAG00000009504	tsr1	100	86.451	Scophthalmus_maximus
ENSNBRG00000020728	tsr1	100	88.677	ENSSDUG00000012074	tsr1	100	89.631	Seriola_dumerili
ENSNBRG00000020728	tsr1	100	89.247	ENSSLDG00000002031	tsr1	100	89.367	Seriola_lalandi_dorsalis
ENSNBRG00000020728	tsr1	92	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSNBRG00000020728	tsr1	99	57.926	ENSSPUG00000007042	TSR1	99	58.293	Sphenodon_punctatus
ENSNBRG00000020728	tsr1	99	87.232	ENSSPAG00000021951	tsr1	100	88.677	Stegastes_partitus
ENSNBRG00000020728	tsr1	99	56.595	ENSSSCG00000038534	TSR1	99	55.914	Sus_scrofa
ENSNBRG00000020728	tsr1	89	59.894	ENSTGUG00000005883	TSR1	100	59.205	Taeniopygia_guttata
ENSNBRG00000020728	tsr1	99	83.713	ENSTRUG00000004665	tsr1	100	82.974	Takifugu_rubripes
ENSNBRG00000020728	tsr1	99	82.324	ENSTNIG00000016196	tsr1	100	82.169	Tetraodon_nigroviridis
ENSNBRG00000020728	tsr1	66	70.769	ENSTBEG00000015275	-	66	70.769	Tupaia_belangeri
ENSNBRG00000020728	tsr1	99	56.401	ENSTTRG00000001177	TSR1	99	55.889	Tursiops_truncatus
ENSNBRG00000020728	tsr1	99	54.600	ENSUAMG00000025160	TSR1	99	54.545	Ursus_americanus
ENSNBRG00000020728	tsr1	95	54.635	ENSUMAG00000009294	TSR1	98	54.377	Ursus_maritimus
ENSNBRG00000020728	tsr1	83	50.640	ENSVPAG00000000228	TSR1	99	50.142	Vicugna_pacos
ENSNBRG00000020728	tsr1	99	55.168	ENSVVUG00000021767	TSR1	99	55.131	Vulpes_vulpes
ENSNBRG00000020728	tsr1	99	52.864	ENSXETG00000023797	tsr1	100	52.732	Xenopus_tropicalis
ENSNBRG00000020728	tsr1	99	83.073	ENSXCOG00000009635	tsr1	100	82.024	Xiphophorus_couchianus
ENSNBRG00000020728	tsr1	100	83.493	ENSXMAG00000001397	tsr1	97	83.971	Xiphophorus_maculatus