EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000020737 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio homolog 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 17155 bases
Position: chrJH422297.1:2005682-2022836
Accession: 102798245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027216	PUF	PF00806.19	3.5e-47	1	4
ENSNBRP00000027216	PUF	PF00806.19	3.5e-47	2	4
ENSNBRP00000027216	PUF	PF00806.19	3.5e-47	3	4
ENSNBRP00000027216	PUF	PF00806.19	3.5e-47	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000027929	-	2769	XM_006792533	ENSNBRP00000027216	922 (aa)	XP_006792596	-

Gene Model

Click here to download ENSNBRG00000020737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020737	pum2	100	66.325	ENSG00000055917	PUM2	100	76.471	Homo_sapiens
ENSNBRG00000020737	pum2	100	83.317	ENSAPOG00000015756	pum2	100	85.339	Acanthochromis_polyacanthus
ENSNBRG00000020737	pum2	99	67.963	ENSAMEG00000002823	PUM2	100	66.667	Ailuropoda_melanoleuca
ENSNBRG00000020737	pum2	100	79.100	ENSACIG00000010646	pum2	92	97.655	Amphilophus_citrinellus
ENSNBRG00000020737	pum2	100	86.414	ENSAPEG00000019924	pum2	100	88.574	Amphiprion_percula
ENSNBRG00000020737	pum2	100	65.766	ENSAPLG00000010496	PUM2	90	66.748	Anas_platyrhynchos
ENSNBRG00000020737	pum2	100	64.151	ENSACAG00000010491	PUM2	100	65.281	Anolis_carolinensis
ENSNBRG00000020737	pum2	100	67.298	ENSANAG00000021807	PUM2	100	66.993	Aotus_nancymaae
ENSNBRG00000020737	pum2	99	70.787	ENSBTAG00000011155	PUM2	100	79.101	Bos_taurus
ENSNBRG00000020737	pum2	100	67.198	ENSCJAG00000007450	PUM2	100	66.993	Callithrix_jacchus
ENSNBRG00000020737	pum2	99	66.481	ENSCAFG00000003839	PUM2	100	66.993	Canis_familiaris
ENSNBRG00000020737	pum2	99	66.350	ENSCAFG00020025689	PUM2	100	66.667	Canis_lupus_dingo
ENSNBRG00000020737	pum2	100	66.733	ENSCHIG00000022180	PUM2	100	67.237	Capra_hircus
ENSNBRG00000020737	pum2	100	65.983	ENSTSYG00000014463	PUM2	100	66.993	Carlito_syrichta
ENSNBRG00000020737	pum2	100	67.398	ENSCPOG00000031996	PUM2	100	66.748	Cavia_porcellus
ENSNBRG00000020737	pum2	100	66.325	ENSCCAG00000037035	PUM2	100	66.993	Cebus_capucinus
ENSNBRG00000020737	pum2	100	66.496	ENSCATG00000043826	PUM2	100	66.993	Cercocebus_atys
ENSNBRG00000020737	pum2	100	67.398	ENSCLAG00000006048	PUM2	100	66.993	Chinchilla_lanigera
ENSNBRG00000020737	pum2	100	66.496	ENSCSAG00000008087	PUM2	100	66.993	Chlorocebus_sabaeus
ENSNBRG00000020737	pum2	61	73.276	ENSCHOG00000004575	PUM2	75	73.276	Choloepus_hoffmanni
ENSNBRG00000020737	pum2	100	65.868	ENSCPBG00000019966	PUM2	100	64.571	Chrysemys_picta_bellii
ENSNBRG00000020737	pum2	99	68.035	ENSCANG00000032797	PUM2	100	75.253	Colobus_angolensis_palliatus
ENSNBRG00000020737	pum2	100	66.108	ENSCGRG00001025023	Pum2	100	66.993	Cricetulus_griseus_chok1gshd
ENSNBRG00000020737	pum2	100	66.108	ENSCGRG00000001580	Pum2	100	66.993	Cricetulus_griseus_crigri
ENSNBRG00000020737	pum2	100	79.552	ENSCSEG00000020899	pum2	89	81.478	Cynoglossus_semilaevis
ENSNBRG00000020737	pum2	99	91.349	ENSCVAG00000002426	pum2	90	91.474	Cyprinodon_variegatus
ENSNBRG00000020737	pum2	100	67.685	ENSDARG00000061040	pum2	82	91.288	Danio_rerio
ENSNBRG00000020737	pum2	96	67.767	ENSDNOG00000006733	PUM2	100	60.266	Dasypus_novemcinctus
ENSNBRG00000020737	pum2	96	59.833	ENSDORG00000011453	Pum2	89	65.937	Dipodomys_ordii
ENSNBRG00000020737	pum2	84	82.955	ENSETEG00000017683	PUM2	75	82.955	Echinops_telfairi
ENSNBRG00000020737	pum2	94	58.797	ENSEBUG00000004435	pum2	96	61.071	Eptatretus_burgeri
ENSNBRG00000020737	pum2	65	80.909	ENSEBUG00000014828	pum2	72	80.909	Eptatretus_burgeri
ENSNBRG00000020737	pum2	100	66.500	ENSEASG00005009429	PUM2	100	66.993	Equus_asinus_asinus
ENSNBRG00000020737	pum2	99	70.562	ENSECAG00000021930	PUM2	100	78.836	Equus_caballus
ENSNBRG00000020737	pum2	65	69.811	ENSEEUG00000003224	-	67	69.811	Erinaceus_europaeus
ENSNBRG00000020737	pum2	99	81.959	ENSELUG00000014997	pum2	82	80.810	Esox_lucius
ENSNBRG00000020737	pum2	99	66.481	ENSFCAG00000027520	PUM2	100	72.533	Felis_catus
ENSNBRG00000020737	pum2	100	65.714	ENSFALG00000001759	PUM2	100	66.993	Ficedula_albicollis
ENSNBRG00000020737	pum2	100	66.500	ENSFDAG00000019685	PUM2	100	66.504	Fukomys_damarensis
ENSNBRG00000020737	pum2	100	90.783	ENSFHEG00000021596	pum2	100	84.226	Fundulus_heteroclitus
ENSNBRG00000020737	pum2	98	63.500	ENSGALG00000016481	PUM2	100	66.748	Gallus_gallus
ENSNBRG00000020737	pum2	100	83.916	ENSGAFG00000013691	pum2	100	85.844	Gambusia_affinis
ENSNBRG00000020737	pum2	99	66.605	ENSGAGG00000020698	PUM2	100	66.015	Gopherus_agassizii
ENSNBRG00000020737	pum2	100	66.496	ENSGGOG00000011374	PUM2	100	66.993	Gorilla_gorilla
ENSNBRG00000020737	pum2	98	87.107	ENSHBUG00000016453	pum2	88	86.904	Haplochromis_burtoni
ENSNBRG00000020737	pum2	100	66.102	ENSHGLG00000007892	PUM2	100	66.015	Heterocephalus_glaber_female
ENSNBRG00000020737	pum2	100	59.612	ENSHGLG00100015510	PUM2	100	65.693	Heterocephalus_glaber_male
ENSNBRG00000020737	pum2	99	90.972	ENSHCOG00000010119	pum2	82	90.731	Hippocampus_comes
ENSNBRG00000020737	pum2	100	66.866	ENSSTOG00000006262	PUM2	100	66.993	Ictidomys_tridecemlineatus
ENSNBRG00000020737	pum2	100	67.367	ENSJJAG00000020969	Pum2	100	66.667	Jaculus_jaculus
ENSNBRG00000020737	pum2	100	87.992	ENSKMAG00000017216	pum2	100	87.992	Kryptolebias_marmoratus
ENSNBRG00000020737	pum2	100	65.646	ENSLACG00000008723	PUM2	81	66.899	Latimeria_chalumnae
ENSNBRG00000020737	pum2	99	70.326	ENSLOCG00000017196	pum2	89	69.438	Lepisosteus_oculatus
ENSNBRG00000020737	pum2	100	66.370	ENSLAFG00000009278	PUM2	100	66.180	Loxodonta_africana
ENSNBRG00000020737	pum2	100	66.496	ENSMFAG00000000492	PUM2	100	66.993	Macaca_fascicularis
ENSNBRG00000020737	pum2	100	67.398	ENSMMUG00000023181	PUM2	100	66.993	Macaca_mulatta
ENSNBRG00000020737	pum2	100	67.398	ENSMNEG00000039659	PUM2	100	66.993	Macaca_nemestrina
ENSNBRG00000020737	pum2	100	66.496	ENSMLEG00000039243	PUM2	100	66.993	Mandrillus_leucophaeus
ENSNBRG00000020737	pum2	100	60.074	ENSMGAG00000014040	PUM2	100	66.748	Meleagris_gallopavo
ENSNBRG00000020737	pum2	100	60.592	ENSMAUG00000000311	Pum2	100	66.667	Mesocricetus_auratus
ENSNBRG00000020737	pum2	100	61.075	ENSMICG00000011647	PUM2	100	66.993	Microcebus_murinus
ENSNBRG00000020737	pum2	100	60.407	ENSMOCG00000013663	Pum2	100	66.667	Microtus_ochrogaster
ENSNBRG00000020737	pum2	96	65.631	ENSMODG00000009811	PUM2	96	62.287	Monodelphis_domestica
ENSNBRG00000020737	pum2	100	81.076	ENSMALG00000022313	pum2	100	82.056	Monopterus_albus
ENSNBRG00000020737	pum2	100	65.579	MGP_CAROLIEiJ_G0017603	Pum2	99	72.174	Mus_caroli
ENSNBRG00000020737	pum2	100	66.733	ENSMUSG00000020594	Pum2	98	72.174	Mus_musculus
ENSNBRG00000020737	pum2	100	67.267	MGP_PahariEiJ_G0029361	Pum2	99	72.174	Mus_pahari
ENSNBRG00000020737	pum2	100	66.834	MGP_SPRETEiJ_G0018447	Pum2	99	72.174	Mus_spretus
ENSNBRG00000020737	pum2	99	66.852	ENSMPUG00000013734	PUM2	100	66.993	Mustela_putorius_furo
ENSNBRG00000020737	pum2	99	65.683	ENSMLUG00000007362	PUM2	96	66.504	Myotis_lucifugus
ENSNBRG00000020737	pum2	99	41.722	ENSNGAG00000016239	-	69	48.368	Nannospalax_galili
ENSNBRG00000020737	pum2	100	66.154	ENSNGAG00000016665	-	89	66.423	Nannospalax_galili
ENSNBRG00000020737	pum2	100	66.325	ENSNLEG00000002509	PUM2	100	64.520	Nomascus_leucogenys
ENSNBRG00000020737	pum2	75	86.864	ENSMEUG00000016567	PUM2	96	86.864	Notamacropus_eugenii
ENSNBRG00000020737	pum2	81	62.937	ENSOPRG00000001963	PUM2	56	56.537	Ochotona_princeps
ENSNBRG00000020737	pum2	100	66.766	ENSODEG00000007823	PUM2	100	65.968	Octodon_degus
ENSNBRG00000020737	pum2	99	67.283	ENSOCUG00000017908	PUM2	100	66.993	Oryctolagus_cuniculus
ENSNBRG00000020737	pum2	100	81.000	ENSORLG00000012611	pum2	100	82.692	Oryzias_latipes
ENSNBRG00000020737	pum2	100	81.000	ENSORLG00020014452	pum2	100	82.692	Oryzias_latipes_hni
ENSNBRG00000020737	pum2	94	79.937	ENSOMEG00000005889	pum2	100	81.070	Oryzias_melastigma
ENSNBRG00000020737	pum2	95	65.973	ENSOGAG00000002187	PUM2	100	65.557	Otolemur_garnettii
ENSNBRG00000020737	pum2	99	66.236	ENSOARG00000017236	PUM2	100	67.237	Ovis_aries
ENSNBRG00000020737	pum2	100	66.496	ENSPPAG00000023095	PUM2	100	66.993	Pan_paniscus
ENSNBRG00000020737	pum2	99	66.481	ENSPPRG00000021443	PUM2	100	66.748	Panthera_pardus
ENSNBRG00000020737	pum2	99	66.481	ENSPTIG00000018982	PUM2	100	66.748	Panthera_tigris_altaica
ENSNBRG00000020737	pum2	100	66.496	ENSPTRG00000011692	PUM2	100	66.993	Pan_troglodytes
ENSNBRG00000020737	pum2	89	64.655	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSNBRG00000020737	pum2	100	69.427	ENSPKIG00000023195	pum2	100	68.033	Paramormyrops_kingsleyae
ENSNBRG00000020737	pum2	100	64.726	ENSPSIG00000011626	PUM2	88	66.748	Pelodiscus_sinensis
ENSNBRG00000020737	pum2	100	80.900	ENSPMGG00000016123	pum2	100	83.822	Periophthalmus_magnuspinnatus
ENSNBRG00000020737	pum2	100	60.130	ENSPEMG00000008357	Pum2	100	66.667	Peromyscus_maniculatus_bairdii
ENSNBRG00000020737	pum2	100	62.019	ENSPMAG00000007038	pum2	89	61.985	Petromyzon_marinus
ENSNBRG00000020737	pum2	100	62.745	ENSPCIG00000022139	PUM2	100	62.103	Phascolarctos_cinereus
ENSNBRG00000020737	pum2	100	84.416	ENSPLAG00000001826	pum2	100	86.350	Poecilia_latipinna
ENSNBRG00000020737	pum2	100	84.132	ENSPREG00000006905	pum2	100	86.061	Poecilia_reticulata
ENSNBRG00000020737	pum2	100	66.667	ENSPPYG00000012617	PUM2	100	66.993	Pongo_abelii
ENSNBRG00000020737	pum2	82	89.130	ENSPCAG00000008001	PUM2	67	89.130	Procavia_capensis
ENSNBRG00000020737	pum2	98	67.037	ENSPCOG00000019636	PUM2	100	66.667	Propithecus_coquereli
ENSNBRG00000020737	pum2	97	65.392	ENSPVAG00000002920	PUM2	100	62.864	Pteropus_vampyrus
ENSNBRG00000020737	pum2	100	88.224	ENSPNYG00000022901	pum2	89	88.224	Pundamilia_nyererei
ENSNBRG00000020737	pum2	97	80.292	ENSPNAG00000008025	pum2	100	78.936	Pygocentrus_nattereri
ENSNBRG00000020737	pum2	100	66.633	ENSRNOG00000006180	Pum2	100	66.504	Rattus_norvegicus
ENSNBRG00000020737	pum2	100	67.398	ENSRBIG00000044880	PUM2	100	66.993	Rhinopithecus_bieti
ENSNBRG00000020737	pum2	100	66.325	ENSSBOG00000022007	PUM2	100	66.993	Saimiri_boliviensis_boliviensis
ENSNBRG00000020737	pum2	96	65.905	ENSSHAG00000002778	PUM2	96	64.548	Sarcophilus_harrisii
ENSNBRG00000020737	pum2	87	59.556	ENSSARG00000010992	PUM2	86	49.785	Sorex_araneus
ENSNBRG00000020737	pum2	99	64.572	ENSSPUG00000017012	PUM2	99	64.792	Sphenodon_punctatus
ENSNBRG00000020737	pum2	100	86.800	ENSSPAG00000022948	pum2	100	88.968	Stegastes_partitus
ENSNBRG00000020737	pum2	100	66.002	ENSSSCG00000008600	PUM2	100	66.993	Sus_scrofa
ENSNBRG00000020737	pum2	100	65.714	ENSTGUG00000013149	PUM2	100	66.748	Taeniopygia_guttata
ENSNBRG00000020737	pum2	81	66.667	ENSTBEG00000008729	PUM2	70	67.698	Tupaia_belangeri
ENSNBRG00000020737	pum2	99	66.296	ENSTTRG00000004887	PUM2	100	66.180	Tursiops_truncatus
ENSNBRG00000020737	pum2	66	68.831	ENSUAMG00000008120	PUM2	97	66.180	Ursus_americanus
ENSNBRG00000020737	pum2	100	66.700	ENSUMAG00000023198	PUM2	100	66.993	Ursus_maritimus
ENSNBRG00000020737	pum2	99	65.804	ENSVPAG00000005056	PUM2	100	66.667	Vicugna_pacos
ENSNBRG00000020737	pum2	100	66.600	ENSVVUG00000014829	PUM2	100	66.993	Vulpes_vulpes
ENSNBRG00000020737	pum2	100	56.772	ENSXETG00000008903	pum2	80	66.993	Xenopus_tropicalis
ENSNBRG00000020737	pum2	100	84.116	ENSXMAG00000017682	pum2	100	86.047	Xiphophorus_maculatus