EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000020744 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7480 bases
Position: chrJH422452.1:943780-951259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027198	MMR_HSR1	PF01926.23	8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000027911	-	744	-	ENSNBRP00000027198	247 (aa)	-	-
ENSNBRT00000027925	-	774	-	ENSNBRP00000027212	257 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000020744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000020744	-	91	34.074	ENSNBRG00000021369	zgc:153654	57	34.074
ENSNBRG00000020744	-	93	62.132	ENSNBRG00000020806	-	93	62.132
ENSNBRG00000020744	-	87	61.200	ENSNBRG00000006414	-	87	61.200
ENSNBRG00000020744	-	91	34.432	ENSNBRG00000021762	-	61	34.432
ENSNBRG00000020744	-	91	63.534	ENSNBRG00000022075	-	93	64.751
ENSNBRG00000020744	-	86	35.938	ENSNBRG00000022795	-	58	35.938
ENSNBRG00000020744	-	86	45.136	ENSNBRG00000023290	-	86	45.136
ENSNBRG00000020744	-	85	36.364	ENSNBRG00000021454	-	85	35.802
ENSNBRG00000020744	-	86	44.747	ENSNBRG00000024253	-	87	44.747
ENSNBRG00000020744	-	86	35.938	ENSNBRG00000021612	-	61	35.938
ENSNBRG00000020744	-	87	68.482	ENSNBRG00000006386	-	97	68.482
ENSNBRG00000020744	-	82	62.551	ENSNBRG00000020781	-	98	62.551
ENSNBRG00000020744	-	93	32.601	ENSNBRG00000021865	-	60	32.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020744	-	91	65.428	ENSACIG00000015616	-	97	65.428	Amphilophus_citrinellus
ENSNBRG00000020744	-	87	61.569	ENSACIG00000004501	-	89	61.569	Amphilophus_citrinellus
ENSNBRG00000020744	-	83	37.959	ENSACIG00000015237	-	92	37.959	Amphilophus_citrinellus
ENSNBRG00000020744	-	94	57.609	ENSACIG00000004408	-	94	57.609	Amphilophus_citrinellus
ENSNBRG00000020744	-	89	62.548	ENSACIG00000004426	-	90	62.548	Amphilophus_citrinellus
ENSNBRG00000020744	-	88	64.479	ENSACIG00000015684	-	93	64.479	Amphilophus_citrinellus
ENSNBRG00000020744	-	87	64.961	ENSACIG00000004521	-	91	64.961	Amphilophus_citrinellus
ENSNBRG00000020744	-	90	65.000	ENSACIG00000004444	-	95	65.000	Amphilophus_citrinellus
ENSNBRG00000020744	-	87	54.651	ENSACIG00000000741	-	91	54.651	Amphilophus_citrinellus
ENSNBRG00000020744	-	87	55.212	ENSAOCG00000002056	-	86	55.212	Amphiprion_ocellaris
ENSNBRG00000020744	-	92	55.019	ENSAPEG00000021053	-	94	55.019	Amphiprion_percula
ENSNBRG00000020744	-	90	41.264	ENSATEG00000002718	-	80	42.188	Anabas_testudineus
ENSNBRG00000020744	-	93	44.944	ENSATEG00000002869	-	97	44.944	Anabas_testudineus
ENSNBRG00000020744	-	90	64.504	ENSACLG00000016487	-	88	64.504	Astatotilapia_calliptera
ENSNBRG00000020744	-	86	43.969	ENSACLG00000010292	-	91	43.969	Astatotilapia_calliptera
ENSNBRG00000020744	-	88	43.893	ENSACLG00000018321	-	91	43.893	Astatotilapia_calliptera
ENSNBRG00000020744	-	90	43.077	ENSACLG00000002020	-	97	43.077	Astatotilapia_calliptera
ENSNBRG00000020744	-	87	65.041	ENSACLG00000027615	-	97	65.041	Astatotilapia_calliptera
ENSNBRG00000020744	-	89	66.216	ENSACLG00000016390	-	94	66.216	Astatotilapia_calliptera
ENSNBRG00000020744	-	81	35.918	ENSAMXG00000037563	-	86	35.918	Astyanax_mexicanus
ENSNBRG00000020744	-	89	45.211	ENSCSEG00000018832	-	98	45.211	Cynoglossus_semilaevis
ENSNBRG00000020744	-	85	41.569	ENSCVAG00000007214	-	98	41.569	Cyprinodon_variegatus
ENSNBRG00000020744	-	99	40.000	ENSCVAG00000016719	-	100	40.000	Cyprinodon_variegatus
ENSNBRG00000020744	-	51	36.310	ENSCVAG00000014640	-	78	36.310	Cyprinodon_variegatus
ENSNBRG00000020744	-	85	41.502	ENSCVAG00000023166	-	96	41.502	Cyprinodon_variegatus
ENSNBRG00000020744	-	92	34.432	ENSDARG00000092634	CABZ01000634.1	92	34.432	Danio_rerio
ENSNBRG00000020744	-	94	31.884	ENSDARG00000010729	CABZ01073795.1	95	31.884	Danio_rerio
ENSNBRG00000020744	-	83	36.437	ENSDARG00000075791	si:dkey-79f11.5	78	36.437	Danio_rerio
ENSNBRG00000020744	-	92	34.066	ENSDARG00000093857	si:dkey-79f11.10	85	34.066	Danio_rerio
ENSNBRG00000020744	-	87	30.798	ENSDARG00000029720	si:dkeyp-9d4.2	89	30.798	Danio_rerio
ENSNBRG00000020744	-	82	31.984	ENSDARG00000095309	si:dkey-79f11.9	88	31.984	Danio_rerio
ENSNBRG00000020744	-	66	38.537	ENSDARG00000015678	si:dkeyp-75b4.9	98	38.537	Danio_rerio
ENSNBRG00000020744	-	92	34.672	ENSDARG00000095673	si:dkey-79f11.8	84	34.672	Danio_rerio
ENSNBRG00000020744	-	92	35.531	ENSDARG00000107486	CR855320.3	92	35.531	Danio_rerio
ENSNBRG00000020744	-	86	38.645	ENSFHEG00000018078	-	92	38.645	Fundulus_heteroclitus
ENSNBRG00000020744	-	93	42.222	ENSFHEG00000018069	-	93	42.222	Fundulus_heteroclitus
ENSNBRG00000020744	-	96	41.869	ENSFHEG00000021105	-	97	41.869	Fundulus_heteroclitus
ENSNBRG00000020744	-	70	43.439	ENSFHEG00000019992	-	74	43.439	Fundulus_heteroclitus
ENSNBRG00000020744	-	91	39.259	ENSGAFG00000019423	-	59	39.259	Gambusia_affinis
ENSNBRG00000020744	-	82	40.891	ENSGAFG00000019422	-	95	40.891	Gambusia_affinis
ENSNBRG00000020744	-	90	48.106	ENSGACG00000001319	-	98	48.106	Gasterosteus_aculeatus
ENSNBRG00000020744	-	91	46.840	ENSGACG00000012548	-	92	46.570	Gasterosteus_aculeatus
ENSNBRG00000020744	-	91	47.584	ENSGACG00000012556	-	85	48.106	Gasterosteus_aculeatus
ENSNBRG00000020744	-	84	66.122	ENSHBUG00000010945	-	92	66.122	Haplochromis_burtoni
ENSNBRG00000020744	-	63	34.409	ENSIPUG00000006725	-	99	34.409	Ictalurus_punctatus
ENSNBRG00000020744	-	95	40.925	ENSIPUG00000006852	-	86	41.281	Ictalurus_punctatus
ENSNBRG00000020744	-	95	36.823	ENSIPUG00000007632	-	78	36.823	Ictalurus_punctatus
ENSNBRG00000020744	-	91	37.313	ENSIPUG00000005624	-	98	37.313	Ictalurus_punctatus
ENSNBRG00000020744	-	85	42.460	ENSKMAG00000000325	-	91	42.460	Kryptolebias_marmoratus
ENSNBRG00000020744	-	84	46.000	ENSKMAG00000006729	-	93	46.000	Kryptolebias_marmoratus
ENSNBRG00000020744	-	86	44.488	ENSKMAG00000000369	-	94	44.488	Kryptolebias_marmoratus
ENSNBRG00000020744	-	92	41.455	ENSMAMG00000003546	-	91	41.455	Mastacembelus_armatus
ENSNBRG00000020744	-	87	49.606	ENSMAMG00000003570	-	89	49.606	Mastacembelus_armatus
ENSNBRG00000020744	-	87	67.704	ENSMZEG00005008329	-	97	67.704	Maylandia_zebra
ENSNBRG00000020744	-	86	43.969	ENSMZEG00005015498	-	90	43.969	Maylandia_zebra
ENSNBRG00000020744	-	88	68.726	ENSMZEG00005008301	-	97	68.726	Maylandia_zebra
ENSNBRG00000020744	-	87	70.039	ENSONIG00000012319	-	99	70.039	Oreochromis_niloticus
ENSNBRG00000020744	-	82	41.152	ENSONIG00000016843	-	98	41.152	Oreochromis_niloticus
ENSNBRG00000020744	-	87	75.781	ENSONIG00000015167	-	99	75.781	Oreochromis_niloticus
ENSNBRG00000020744	-	83	67.206	ENSONIG00000017465	-	100	67.206	Oreochromis_niloticus
ENSNBRG00000020744	-	90	37.500	ENSONIG00000018790	-	92	37.500	Oreochromis_niloticus
ENSNBRG00000020744	-	84	67.871	ENSONIG00000012317	-	100	67.871	Oreochromis_niloticus
ENSNBRG00000020744	-	57	64.088	ENSONIG00000013227	-	100	64.088	Oreochromis_niloticus
ENSNBRG00000020744	-	87	65.882	ENSONIG00000015371	-	100	65.882	Oreochromis_niloticus
ENSNBRG00000020744	-	87	68.482	ENSONIG00000015247	-	91	68.482	Oreochromis_niloticus
ENSNBRG00000020744	-	90	39.259	ENSPMGG00000004994	-	93	39.259	Periophthalmus_magnuspinnatus
ENSNBRG00000020744	-	81	41.870	ENSPMGG00000002695	-	93	41.870	Periophthalmus_magnuspinnatus
ENSNBRG00000020744	-	91	38.806	ENSPMGG00000022341	-	80	38.806	Periophthalmus_magnuspinnatus
ENSNBRG00000020744	-	92	44.361	ENSPMGG00000012906	-	96	44.361	Periophthalmus_magnuspinnatus
ENSNBRG00000020744	-	89	38.577	ENSPFOG00000015493	-	92	38.577	Poecilia_formosa
ENSNBRG00000020744	-	89	41.573	ENSPFOG00000015382	-	93	41.573	Poecilia_formosa
ENSNBRG00000020744	-	89	40.000	ENSPFOG00000003841	-	93	40.293	Poecilia_formosa
ENSNBRG00000020744	-	90	42.966	ENSPFOG00000015455	-	89	42.966	Poecilia_formosa
ENSNBRG00000020744	-	89	41.353	ENSPFOG00000003807	-	93	41.353	Poecilia_formosa
ENSNBRG00000020744	-	87	41.797	ENSPLAG00000018274	-	91	41.797	Poecilia_latipinna
ENSNBRG00000020744	-	90	41.418	ENSPMEG00000018635	-	93	41.418	Poecilia_mexicana
ENSNBRG00000020744	-	87	43.478	ENSPMEG00000018626	-	90	43.478	Poecilia_mexicana
ENSNBRG00000020744	-	90	41.176	ENSPREG00000005137	-	95	41.176	Poecilia_reticulata
ENSNBRG00000020744	-	95	73.944	ENSPNYG00000005478	-	99	73.944	Pundamilia_nyererei
ENSNBRG00000020744	-	90	64.479	ENSPNYG00000024019	-	89	64.479	Pundamilia_nyererei
ENSNBRG00000020744	-	86	43.580	ENSPNYG00000001584	-	90	43.580	Pundamilia_nyererei
ENSNBRG00000020744	-	92	35.556	ENSPNAG00000009266	-	98	35.556	Pygocentrus_nattereri
ENSNBRG00000020744	-	87	45.312	ENSSDUG00000002417	-	95	45.312	Seriola_dumerili
ENSNBRG00000020744	-	87	44.141	ENSSDUG00000002359	-	95	44.141	Seriola_dumerili
ENSNBRG00000020744	-	88	44.961	ENSSLDG00000008952	-	91	44.186	Seriola_lalandi_dorsalis
ENSNBRG00000020744	-	89	43.893	ENSSLDG00000016397	-	97	43.893	Seriola_lalandi_dorsalis
ENSNBRG00000020744	-	96	53.069	ENSSPAG00000012856	-	97	53.069	Stegastes_partitus
ENSNBRG00000020744	-	87	54.826	ENSSPAG00000012915	-	98	54.826	Stegastes_partitus
ENSNBRG00000020744	-	61	37.563	ENSXCOG00000008517	-	61	37.563	Xiphophorus_couchianus
ENSNBRG00000020744	-	81	37.705	ENSXCOG00000019639	-	93	37.705	Xiphophorus_couchianus
ENSNBRG00000020744	-	50	39.634	ENSXCOG00000003913	-	85	39.634	Xiphophorus_couchianus
ENSNBRG00000020744	-	90	42.751	ENSXMAG00000009973	-	92	43.243	Xiphophorus_maculatus
ENSNBRG00000020744	-	90	44.444	ENSXMAG00000029117	-	95	44.444	Xiphophorus_maculatus
ENSNBRG00000020744	-	87	39.535	ENSXMAG00000009971	-	68	39.535	Xiphophorus_maculatus