EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000020796 (Gene tree)
Gene ID: 102798306
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: DNA-directed RNA polymerase III subunit RPC6-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2718 bases
Position: chrJH422437.1:915872-918589
Accession: 102798306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027249	RNA_pol_Rpc34	PF05158.12	2.8e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000027964	-	1307	XM_006806555	ENSNBRP00000027249	316 (aa)	XP_006806618	UPI0003EBD446

Gene Model

Click here to download ENSNBRG00000020796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000020796	polr3f	100	87.658	ENSG00000132664	POLR3F	100	87.658	Homo_sapiens
ENSNBRG00000020796	polr3f	100	96.203	ENSAPOG00000008271	polr3f	100	96.203	Acanthochromis_polyacanthus
ENSNBRG00000020796	polr3f	100	87.342	ENSAMEG00000005222	POLR3F	100	87.342	Ailuropoda_melanoleuca
ENSNBRG00000020796	polr3f	100	89.557	ENSACIG00000006705	polr3f	100	89.557	Amphilophus_citrinellus
ENSNBRG00000020796	polr3f	100	96.519	ENSAOCG00000000687	polr3f	100	96.519	Amphiprion_ocellaris
ENSNBRG00000020796	polr3f	100	96.203	ENSAPEG00000015263	polr3f	100	96.203	Amphiprion_percula
ENSNBRG00000020796	polr3f	87	98.182	ENSATEG00000015539	polr3f	100	98.182	Anabas_testudineus
ENSNBRG00000020796	polr3f	87	90.182	ENSAPLG00000005533	POLR3F	100	90.182	Anas_platyrhynchos
ENSNBRG00000020796	polr3f	97	86.688	ENSACAG00000014293	POLR3F	99	86.688	Anolis_carolinensis
ENSNBRG00000020796	polr3f	100	87.975	ENSANAG00000026726	POLR3F	100	87.975	Aotus_nancymaae
ENSNBRG00000020796	polr3f	100	99.367	ENSACLG00000003615	polr3f	100	99.367	Astatotilapia_calliptera
ENSNBRG00000020796	polr3f	100	92.405	ENSAMXG00000036020	polr3f	100	92.405	Astyanax_mexicanus
ENSNBRG00000020796	polr3f	100	87.025	ENSBTAG00000008825	POLR3F	100	87.025	Bos_taurus
ENSNBRG00000020796	polr3f	99	33.333	WBGene00021112	W09C3.4	99	33.333	Caenorhabditis_elegans
ENSNBRG00000020796	polr3f	100	87.975	ENSCJAG00000005159	POLR3F	100	87.975	Callithrix_jacchus
ENSNBRG00000020796	polr3f	100	87.658	ENSCAFG00000005420	POLR3F	100	87.658	Canis_familiaris
ENSNBRG00000020796	polr3f	100	87.658	ENSCAFG00020027500	POLR3F	100	87.658	Canis_lupus_dingo
ENSNBRG00000020796	polr3f	100	87.025	ENSCHIG00000014743	POLR3F	100	87.025	Capra_hircus
ENSNBRG00000020796	polr3f	100	87.025	ENSTSYG00000004207	POLR3F	100	87.025	Carlito_syrichta
ENSNBRG00000020796	polr3f	93	48.649	ENSCAPG00000008423	POLR3F	100	72.727	Cavia_aperea
ENSNBRG00000020796	polr3f	100	87.025	ENSCPOG00000002400	POLR3F	100	87.025	Cavia_porcellus
ENSNBRG00000020796	polr3f	100	77.848	ENSCCAG00000021800	POLR3F	100	77.848	Cebus_capucinus
ENSNBRG00000020796	polr3f	100	87.342	ENSCATG00000019507	POLR3F	100	87.342	Cercocebus_atys
ENSNBRG00000020796	polr3f	100	87.342	ENSCLAG00000016296	POLR3F	100	87.342	Chinchilla_lanigera
ENSNBRG00000020796	polr3f	100	87.342	ENSCSAG00000011513	POLR3F	100	87.342	Chlorocebus_sabaeus
ENSNBRG00000020796	polr3f	73	87.640	ENSCHOG00000013268	POLR3F	73	87.640	Choloepus_hoffmanni
ENSNBRG00000020796	polr3f	87	89.455	ENSCPBG00000023473	POLR3F	100	89.455	Chrysemys_picta_bellii
ENSNBRG00000020796	polr3f	99	58.861	ENSCING00000001212	-	99	58.861	Ciona_intestinalis
ENSNBRG00000020796	polr3f	71	58.222	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSNBRG00000020796	polr3f	92	86.942	ENSCANG00000037390	POLR3F	100	86.942	Colobus_angolensis_palliatus
ENSNBRG00000020796	polr3f	100	86.392	ENSCGRG00001002032	Polr3f	100	86.392	Cricetulus_griseus_chok1gshd
ENSNBRG00000020796	polr3f	100	86.392	ENSCGRG00000010852	Polr3f	100	86.392	Cricetulus_griseus_crigri
ENSNBRG00000020796	polr3f	100	93.038	ENSCSEG00000001247	polr3f	100	93.038	Cynoglossus_semilaevis
ENSNBRG00000020796	polr3f	100	94.304	ENSCVAG00000007611	polr3f	100	94.304	Cyprinodon_variegatus
ENSNBRG00000020796	polr3f	100	92.405	ENSDARG00000012572	polr3f	100	92.405	Danio_rerio
ENSNBRG00000020796	polr3f	100	84.177	ENSDNOG00000010719	POLR3F	100	84.177	Dasypus_novemcinctus
ENSNBRG00000020796	polr3f	100	87.342	ENSDORG00000016352	Polr3f	100	87.342	Dipodomys_ordii
ENSNBRG00000020796	polr3f	95	50.333	FBgn0038951	CG5380	99	50.333	Drosophila_melanogaster
ENSNBRG00000020796	polr3f	88	51.971	ENSETEG00000015485	-	99	51.971	Echinops_telfairi
ENSNBRG00000020796	polr3f	100	75.000	ENSEBUG00000006783	polr3f	100	75.000	Eptatretus_burgeri
ENSNBRG00000020796	polr3f	100	87.658	ENSEASG00005002022	POLR3F	100	87.658	Equus_asinus_asinus
ENSNBRG00000020796	polr3f	100	87.658	ENSECAG00000009920	POLR3F	100	87.658	Equus_caballus
ENSNBRG00000020796	polr3f	80	88.000	ENSEEUG00000000184	POLR3F	80	88.000	Erinaceus_europaeus
ENSNBRG00000020796	polr3f	100	92.405	ENSELUG00000001558	polr3f	100	92.405	Esox_lucius
ENSNBRG00000020796	polr3f	100	87.342	ENSFCAG00000013828	POLR3F	100	87.342	Felis_catus
ENSNBRG00000020796	polr3f	87	91.273	ENSFALG00000007623	POLR3F	100	91.273	Ficedula_albicollis
ENSNBRG00000020796	polr3f	100	86.709	ENSFDAG00000002528	POLR3F	100	86.709	Fukomys_damarensis
ENSNBRG00000020796	polr3f	100	93.354	ENSFHEG00000006450	polr3f	100	93.354	Fundulus_heteroclitus
ENSNBRG00000020796	polr3f	100	88.924	ENSGALG00000008749	POLR3F	100	88.924	Gallus_gallus
ENSNBRG00000020796	polr3f	100	95.253	ENSGAFG00000003698	polr3f	100	95.253	Gambusia_affinis
ENSNBRG00000020796	polr3f	100	87.975	ENSGAGG00000006151	POLR3F	100	87.975	Gopherus_agassizii
ENSNBRG00000020796	polr3f	100	87.658	ENSGGOG00000011543	POLR3F	100	87.658	Gorilla_gorilla
ENSNBRG00000020796	polr3f	100	99.684	ENSHBUG00000013806	polr3f	100	99.684	Haplochromis_burtoni
ENSNBRG00000020796	polr3f	100	86.709	ENSHGLG00000011867	POLR3F	100	86.709	Heterocephalus_glaber_female
ENSNBRG00000020796	polr3f	100	86.709	ENSHGLG00100012577	POLR3F	100	86.709	Heterocephalus_glaber_male
ENSNBRG00000020796	polr3f	100	83.861	ENSHCOG00000011751	polr3f	100	83.861	Hippocampus_comes
ENSNBRG00000020796	polr3f	100	92.089	ENSIPUG00000013347	polr3f	100	92.089	Ictalurus_punctatus
ENSNBRG00000020796	polr3f	100	87.342	ENSSTOG00000013588	POLR3F	100	87.342	Ictidomys_tridecemlineatus
ENSNBRG00000020796	polr3f	100	86.709	ENSJJAG00000017513	Polr3f	100	86.709	Jaculus_jaculus
ENSNBRG00000020796	polr3f	87	88.364	ENSKMAG00000016495	polr3f	100	88.364	Kryptolebias_marmoratus
ENSNBRG00000020796	polr3f	73	96.983	ENSLBEG00000011998	polr3f	100	96.983	Labrus_bergylta
ENSNBRG00000020796	polr3f	100	87.975	ENSLACG00000009371	POLR3F	100	87.975	Latimeria_chalumnae
ENSNBRG00000020796	polr3f	100	92.089	ENSLOCG00000015701	polr3f	100	92.089	Lepisosteus_oculatus
ENSNBRG00000020796	polr3f	100	87.025	ENSLAFG00000004929	POLR3F	100	87.025	Loxodonta_africana
ENSNBRG00000020796	polr3f	100	87.342	ENSMFAG00000002227	POLR3F	100	87.342	Macaca_fascicularis
ENSNBRG00000020796	polr3f	87	89.091	ENSMMUG00000004143	POLR3F	100	89.091	Macaca_mulatta
ENSNBRG00000020796	polr3f	100	87.342	ENSMNEG00000033404	POLR3F	100	87.342	Macaca_nemestrina
ENSNBRG00000020796	polr3f	100	87.342	ENSMLEG00000021905	POLR3F	100	87.342	Mandrillus_leucophaeus
ENSNBRG00000020796	polr3f	100	95.570	ENSMAMG00000017975	polr3f	100	95.570	Mastacembelus_armatus
ENSNBRG00000020796	polr3f	100	99.051	ENSMZEG00005015134	polr3f	100	99.051	Maylandia_zebra
ENSNBRG00000020796	polr3f	100	88.924	ENSMGAG00000006691	POLR3F	100	88.924	Meleagris_gallopavo
ENSNBRG00000020796	polr3f	100	86.709	ENSMAUG00000020176	Polr3f	100	86.709	Mesocricetus_auratus
ENSNBRG00000020796	polr3f	100	87.342	ENSMICG00000044519	POLR3F	100	87.342	Microcebus_murinus
ENSNBRG00000020796	polr3f	100	87.025	ENSMOCG00000018352	Polr3f	100	87.025	Microtus_ochrogaster
ENSNBRG00000020796	polr3f	93	95.960	ENSMMOG00000018477	polr3f	100	95.960	Mola_mola
ENSNBRG00000020796	polr3f	100	87.975	ENSMODG00000005624	POLR3F	100	87.975	Monodelphis_domestica
ENSNBRG00000020796	polr3f	100	96.203	ENSMALG00000006685	polr3f	100	96.203	Monopterus_albus
ENSNBRG00000020796	polr3f	100	86.392	MGP_CAROLIEiJ_G0024385	Polr3f	100	86.392	Mus_caroli
ENSNBRG00000020796	polr3f	100	86.392	ENSMUSG00000027427	Polr3f	100	86.392	Mus_musculus
ENSNBRG00000020796	polr3f	100	86.392	MGP_PahariEiJ_G0025829	Polr3f	100	86.392	Mus_pahari
ENSNBRG00000020796	polr3f	100	86.392	MGP_SPRETEiJ_G0025304	Polr3f	100	86.392	Mus_spretus
ENSNBRG00000020796	polr3f	100	66.462	ENSMPUG00000001252	-	100	66.462	Mustela_putorius_furo
ENSNBRG00000020796	polr3f	100	87.342	ENSMLUG00000014844	POLR3F	100	87.342	Myotis_lucifugus
ENSNBRG00000020796	polr3f	100	86.076	ENSNGAG00000010898	Polr3f	100	86.076	Nannospalax_galili
ENSNBRG00000020796	polr3f	100	87.658	ENSNLEG00000009778	POLR3F	100	87.658	Nomascus_leucogenys
ENSNBRG00000020796	polr3f	93	83.051	ENSMEUG00000010320	POLR3F	100	83.051	Notamacropus_eugenii
ENSNBRG00000020796	polr3f	100	86.709	ENSOPRG00000003385	POLR3F	100	86.709	Ochotona_princeps
ENSNBRG00000020796	polr3f	100	87.658	ENSODEG00000011521	POLR3F	100	87.658	Octodon_degus
ENSNBRG00000020796	polr3f	100	97.785	ENSONIG00000006858	polr3f	100	97.785	Oreochromis_niloticus
ENSNBRG00000020796	polr3f	100	87.975	ENSOANG00000001253	POLR3F	100	87.975	Ornithorhynchus_anatinus
ENSNBRG00000020796	polr3f	100	87.658	ENSOCUG00000015067	POLR3F	100	87.658	Oryctolagus_cuniculus
ENSNBRG00000020796	polr3f	100	92.405	ENSORLG00000022412	polr3f	100	92.405	Oryzias_latipes
ENSNBRG00000020796	polr3f	100	92.405	ENSORLG00020021944	polr3f	100	92.405	Oryzias_latipes_hni
ENSNBRG00000020796	polr3f	100	86.392	ENSOGAG00000002916	POLR3F	100	86.392	Otolemur_garnettii
ENSNBRG00000020796	polr3f	100	53.165	ENSOARG00000008647	-	100	52.215	Ovis_aries
ENSNBRG00000020796	polr3f	100	87.025	ENSOARG00000000315	-	100	87.025	Ovis_aries
ENSNBRG00000020796	polr3f	100	87.658	ENSPPAG00000036681	POLR3F	100	87.658	Pan_paniscus
ENSNBRG00000020796	polr3f	100	87.342	ENSPPRG00000024604	POLR3F	100	87.342	Panthera_pardus
ENSNBRG00000020796	polr3f	100	87.342	ENSPTIG00000020292	POLR3F	100	87.342	Panthera_tigris_altaica
ENSNBRG00000020796	polr3f	100	87.658	ENSPTRG00000013287	POLR3F	100	87.658	Pan_troglodytes
ENSNBRG00000020796	polr3f	100	87.342	ENSPANG00000025015	POLR3F	100	87.342	Papio_anubis
ENSNBRG00000020796	polr3f	100	91.456	ENSPKIG00000004427	polr3f	100	91.456	Paramormyrops_kingsleyae
ENSNBRG00000020796	polr3f	87	90.909	ENSPSIG00000016613	POLR3F	100	90.909	Pelodiscus_sinensis
ENSNBRG00000020796	polr3f	100	58.307	ENSPMGG00000018350	polr3f	100	62.025	Periophthalmus_magnuspinnatus
ENSNBRG00000020796	polr3f	100	87.342	ENSPEMG00000006966	Polr3f	100	87.342	Peromyscus_maniculatus_bairdii
ENSNBRG00000020796	polr3f	100	78.165	ENSPMAG00000005530	polr3f	100	78.165	Petromyzon_marinus
ENSNBRG00000020796	polr3f	100	87.658	ENSPCIG00000000908	POLR3F	85	87.658	Phascolarctos_cinereus
ENSNBRG00000020796	polr3f	100	95.253	ENSPFOG00000018334	polr3f	100	95.253	Poecilia_formosa
ENSNBRG00000020796	polr3f	100	95.253	ENSPLAG00000021803	polr3f	100	95.253	Poecilia_latipinna
ENSNBRG00000020796	polr3f	100	95.253	ENSPMEG00000013150	polr3f	100	95.253	Poecilia_mexicana
ENSNBRG00000020796	polr3f	100	95.253	ENSPREG00000005278	polr3f	100	95.253	Poecilia_reticulata
ENSNBRG00000020796	polr3f	100	87.658	ENSPPYG00000010737	POLR3F	100	87.658	Pongo_abelii
ENSNBRG00000020796	polr3f	66	89.189	ENSPCAG00000004893	POLR3F	70	89.189	Procavia_capensis
ENSNBRG00000020796	polr3f	100	87.342	ENSPCOG00000004543	POLR3F	100	87.342	Propithecus_coquereli
ENSNBRG00000020796	polr3f	100	87.025	ENSPVAG00000000403	POLR3F	100	87.025	Pteropus_vampyrus
ENSNBRG00000020796	polr3f	100	99.684	ENSPNYG00000016276	polr3f	100	99.684	Pundamilia_nyererei
ENSNBRG00000020796	polr3f	100	93.038	ENSPNAG00000005164	polr3f	100	93.038	Pygocentrus_nattereri
ENSNBRG00000020796	polr3f	100	86.709	ENSRNOG00000007548	Polr3f	85	86.709	Rattus_norvegicus
ENSNBRG00000020796	polr3f	100	87.342	ENSRBIG00000021268	POLR3F	100	87.342	Rhinopithecus_bieti
ENSNBRG00000020796	polr3f	100	87.342	ENSRROG00000039911	POLR3F	100	87.342	Rhinopithecus_roxellana
ENSNBRG00000020796	polr3f	50	32.530	YNR003C	RPC34	52	33.333	Saccharomyces_cerevisiae
ENSNBRG00000020796	polr3f	100	87.975	ENSSBOG00000018207	POLR3F	100	87.975	Saimiri_boliviensis_boliviensis
ENSNBRG00000020796	polr3f	100	69.716	ENSSHAG00000018160	POLR3F	100	69.716	Sarcophilus_harrisii
ENSNBRG00000020796	polr3f	100	91.456	ENSSFOG00015022433	polr3f	100	91.456	Scleropages_formosus
ENSNBRG00000020796	polr3f	100	94.937	ENSSMAG00000021029	polr3f	100	94.937	Scophthalmus_maximus
ENSNBRG00000020796	polr3f	100	84.810	ENSSDUG00000022435	polr3f	100	84.810	Seriola_dumerili
ENSNBRG00000020796	polr3f	100	95.886	ENSSLDG00000012761	polr3f	100	95.886	Seriola_lalandi_dorsalis
ENSNBRG00000020796	polr3f	100	78.797	ENSSARG00000006039	POLR3F	100	78.797	Sorex_araneus
ENSNBRG00000020796	polr3f	100	87.658	ENSSPUG00000001873	POLR3F	100	87.658	Sphenodon_punctatus
ENSNBRG00000020796	polr3f	100	87.975	ENSSPAG00000002092	polr3f	100	87.975	Stegastes_partitus
ENSNBRG00000020796	polr3f	100	87.025	ENSSSCG00000007095	POLR3F	100	91.810	Sus_scrofa
ENSNBRG00000020796	polr3f	100	88.924	ENSTGUG00000005839	POLR3F	100	88.924	Taeniopygia_guttata
ENSNBRG00000020796	polr3f	100	93.987	ENSTRUG00000012101	polr3f	100	93.987	Takifugu_rubripes
ENSNBRG00000020796	polr3f	100	92.405	ENSTNIG00000006456	polr3f	100	92.405	Tetraodon_nigroviridis
ENSNBRG00000020796	polr3f	100	71.519	ENSTBEG00000007921	POLR3F	100	71.519	Tupaia_belangeri
ENSNBRG00000020796	polr3f	100	87.025	ENSTTRG00000002580	POLR3F	100	87.025	Tursiops_truncatus
ENSNBRG00000020796	polr3f	53	89.157	ENSUAMG00000024166	POLR3F	100	89.157	Ursus_americanus
ENSNBRG00000020796	polr3f	100	87.025	ENSUMAG00000024944	POLR3F	100	87.025	Ursus_maritimus
ENSNBRG00000020796	polr3f	100	86.392	ENSVPAG00000009063	POLR3F	100	86.392	Vicugna_pacos
ENSNBRG00000020796	polr3f	100	87.658	ENSVVUG00000012925	POLR3F	100	87.658	Vulpes_vulpes
ENSNBRG00000020796	polr3f	100	86.709	ENSXETG00000024898	polr3f	100	86.709	Xenopus_tropicalis
ENSNBRG00000020796	polr3f	87	95.636	ENSXCOG00000010301	polr3f	100	95.636	Xiphophorus_couchianus
ENSNBRG00000020796	polr3f	100	94.937	ENSXMAG00000004604	polr3f	100	94.937	Xiphophorus_maculatus