EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSNBRG00000020808 (Gene tree)
Gene ID
102790132
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain-containing protein E1-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
7487 bases
Position
chrJH422281.1:2968503-2975989
Accession
102790132
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000027287CSDPF00313.223.2e-8315
ENSNBRP00000027287CSDPF00313.223.2e-8325
ENSNBRP00000027287CSDPF00313.223.2e-8335
ENSNBRP00000027287CSDPF00313.223.2e-8345
ENSNBRP00000027287CSDPF00313.223.2e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000028003-2310XM_006785314ENSNBRP00000027287769 (aa)XP_006785377-
Gene Model
Click here to download ENSNBRG00000020808's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000020808's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000020808csde110077.373ENSG00000009307CSDE110085.294Homo_sapiens
ENSNBRG00000020808csde110093.628ENSAPOG00000015538csde110093.628Acanthochromis_polyacanthus
ENSNBRG00000020808csde110076.593ENSAMEG00000017129CSDE19476.593Ailuropoda_melanoleuca
ENSNBRG00000020808csde19095.676ENSACIG00000015175csde110095.676Amphilophus_citrinellus
ENSNBRG00000020808csde110093.368ENSAOCG00000011510csde110093.368Amphiprion_ocellaris
ENSNBRG00000020808csde110093.498ENSAPEG00000007194csde110093.498Amphiprion_percula
ENSNBRG00000020808csde110092.718ENSATEG00000003864csde110092.718Anabas_testudineus
ENSNBRG00000020808csde110079.454ENSAPLG00000008797CSDE110079.064Anas_platyrhynchos
ENSNBRG00000020808csde110076.500ENSACAG00000003120CSDE110076.500Anolis_carolinensis
ENSNBRG00000020808csde110077.243ENSANAG00000024665CSDE19577.627Aotus_nancymaae
ENSNBRG00000020808csde19361.433ENSANAG00000028396-9361.433Aotus_nancymaae
ENSNBRG00000020808csde1100100.000ENSACLG00000013296csde1100100.000Astatotilapia_calliptera
ENSNBRG00000020808csde110085.084ENSAMXG00000007436csde110084.565Astyanax_mexicanus
ENSNBRG00000020808csde110077.113ENSBTAG00000000678CSDE110077.113Bos_taurus
ENSNBRG00000020808csde110077.243ENSCJAG00000012565CSDE19477.243Callithrix_jacchus
ENSNBRG00000020808csde19877.822ENSCAFG00000009618CSDE19477.822Canis_familiaris
ENSNBRG00000020808csde110077.633ENSCAFG00020000481CSDE110077.633Canis_lupus_dingo
ENSNBRG00000020808csde110077.113ENSCHIG00000017250CSDE110077.113Capra_hircus
ENSNBRG00000020808csde110077.373ENSTSYG00000003747CSDE110077.373Carlito_syrichta
ENSNBRG00000020808csde110060.026ENSCAPG00000015128CSDE110060.026Cavia_aperea
ENSNBRG00000020808csde110071.808ENSCPOG00000040388CSDE110071.808Cavia_porcellus
ENSNBRG00000020808csde110077.243ENSCCAG00000036794CSDE110074.250Cebus_capucinus
ENSNBRG00000020808csde19655.111ENSCCAG00000030878-9154.889Cebus_capucinus
ENSNBRG00000020808csde19556.872ENSCCAG00000033677-9955.924Cebus_capucinus
ENSNBRG00000020808csde110077.373ENSCATG00000036962CSDE19777.373Cercocebus_atys
ENSNBRG00000020808csde110077.503ENSCLAG00000006618CSDE110077.503Chinchilla_lanigera
ENSNBRG00000020808csde110074.375ENSCSAG00000001658CSDE19574.375Chlorocebus_sabaeus
ENSNBRG00000020808csde110075.594ENSCHOG00000000918CSDE18975.594Choloepus_hoffmanni
ENSNBRG00000020808csde110079.584ENSCPBG00000016547CSDE110079.194Chrysemys_picta_bellii
ENSNBRG00000020808csde19742.047ENSCING00000014465-9641.800Ciona_intestinalis
ENSNBRG00000020808csde19741.161ENSCSAVG00000008100-10039.752Ciona_savignyi
ENSNBRG00000020808csde110077.373ENSCANG00000035096CSDE19777.373Colobus_angolensis_palliatus
ENSNBRG00000020808csde18979.259ENSCANG00000031069-9479.259Colobus_angolensis_palliatus
ENSNBRG00000020808csde110063.069ENSCGRG00001014011-10063.069Cricetulus_griseus_chok1gshd
ENSNBRG00000020808csde110076.723ENSCGRG00001016833-10076.723Cricetulus_griseus_chok1gshd
ENSNBRG00000020808csde19673.111ENSCGRG00000002225-10073.111Cricetulus_griseus_crigri
ENSNBRG00000020808csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSNBRG00000020808csde110091.157ENSCSEG00000002620csde110091.157Cynoglossus_semilaevis
ENSNBRG00000020808csde110091.678ENSCVAG00000001344csde110091.678Cyprinodon_variegatus
ENSNBRG00000020808csde110082.353ENSDARG00000074758csde110082.804Danio_rerio
ENSNBRG00000020808csde16250.951ENSDNOG00000034464-9950.951Dasypus_novemcinctus
ENSNBRG00000020808csde110077.792ENSDNOG00000010287-9377.792Dasypus_novemcinctus
ENSNBRG00000020808csde19976.119ENSDORG00000011609Csde110076.119Dipodomys_ordii
ENSNBRG00000020808csde19648.057FBgn0263352Unr8047.410Drosophila_melanogaster
ENSNBRG00000020808csde19960.156ENSETEG00000013678-9960.156Echinops_telfairi
ENSNBRG00000020808csde19371.470ENSETEG00000002491-8271.470Echinops_telfairi
ENSNBRG00000020808csde17953.465ENSETEG00000007109-9953.465Echinops_telfairi
ENSNBRG00000020808csde19068.671ENSETEG00000006280-9968.671Echinops_telfairi
ENSNBRG00000020808csde19953.202ENSEBUG00000008647csde19951.551Eptatretus_burgeri
ENSNBRG00000020808csde110077.763ENSEASG00005006284CSDE110074.750Equus_asinus_asinus
ENSNBRG00000020808csde110077.763ENSECAG00000020885CSDE19977.591Equus_caballus
ENSNBRG00000020808csde19381.562ENSEEUG00000006286CSDE16881.562Erinaceus_europaeus
ENSNBRG00000020808csde110085.511ENSELUG00000015507csde110084.864Esox_lucius
ENSNBRG00000020808csde110077.633ENSFCAG00000029266CSDE110077.633Felis_catus
ENSNBRG00000020808csde110075.875ENSFALG00000003407CSDE110075.875Ficedula_albicollis
ENSNBRG00000020808csde19975.970ENSFDAG00000007882CSDE110075.970Fukomys_damarensis
ENSNBRG00000020808csde19891.788ENSFHEG00000010799csde19991.788Fundulus_heteroclitus
ENSNBRG00000020808csde19985.338ENSGMOG00000012731csde110085.338Gadus_morhua
ENSNBRG00000020808csde19876.306ENSGALG00000002139CSDE19876.306Gallus_gallus
ENSNBRG00000020808csde19492.214ENSGAFG00000005241csde19592.214Gambusia_affinis
ENSNBRG00000020808csde19988.833ENSGACG00000004544csde110088.833Gasterosteus_aculeatus
ENSNBRG00000020808csde110079.454ENSGAGG00000017685CSDE110076.375Gopherus_agassizii
ENSNBRG00000020808csde110077.373ENSGGOG00000002164CSDE110077.373Gorilla_gorilla
ENSNBRG00000020808csde1100100.000ENSHBUG00000020315csde1100100.000Haplochromis_burtoni
ENSNBRG00000020808csde110063.476ENSHGLG00000019549-10063.224Heterocephalus_glaber_female
ENSNBRG00000020808csde19959.825ENSHGLG00000000650-9959.825Heterocephalus_glaber_female
ENSNBRG00000020808csde19666.000ENSHGLG00000010039-10066.000Heterocephalus_glaber_female
ENSNBRG00000020808csde19967.463ENSHGLG00000008555-10067.463Heterocephalus_glaber_female
ENSNBRG00000020808csde19966.841ENSHGLG00000007471-9866.841Heterocephalus_glaber_female
ENSNBRG00000020808csde110070.351ENSHGLG00000009620-10070.741Heterocephalus_glaber_female
ENSNBRG00000020808csde110069.571ENSHGLG00000003829-10069.571Heterocephalus_glaber_female
ENSNBRG00000020808csde19665.778ENSHGLG00100006910-10065.778Heterocephalus_glaber_male
ENSNBRG00000020808csde19963.046ENSHGLG00100002245-9963.046Heterocephalus_glaber_male
ENSNBRG00000020808csde110077.113ENSHGLG00100019438-10077.113Heterocephalus_glaber_male
ENSNBRG00000020808csde19965.531ENSHGLG00100007287-9865.531Heterocephalus_glaber_male
ENSNBRG00000020808csde19365.229ENSHGLG00100004195-10064.951Heterocephalus_glaber_male
ENSNBRG00000020808csde110065.150ENSHGLG00100012072-10065.150Heterocephalus_glaber_male
ENSNBRG00000020808csde19660.444ENSHGLG00100004833-10060.444Heterocephalus_glaber_male
ENSNBRG00000020808csde110063.636ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSNBRG00000020808csde110090.897ENSHCOG00000004158csde110090.897Hippocampus_comes
ENSNBRG00000020808csde110084.565ENSIPUG00000000355csde110083.917Ictalurus_punctatus
ENSNBRG00000020808csde19065.503ENSSTOG00000032722-9865.503Ictidomys_tridecemlineatus
ENSNBRG00000020808csde110063.520ENSSTOG00000030994-10063.393Ictidomys_tridecemlineatus
ENSNBRG00000020808csde19976.119ENSJJAG00000019571Csde110076.119Jaculus_jaculus
ENSNBRG00000020808csde110088.279ENSKMAG00000005685csde110087.841Kryptolebias_marmoratus
ENSNBRG00000020808csde110092.588ENSLBEG00000014770csde110092.588Labrus_bergylta
ENSNBRG00000020808csde110073.580ENSLACG00000018452CSDE19473.580Latimeria_chalumnae
ENSNBRG00000020808csde110082.080ENSLOCG00000010413csde19482.080Lepisosteus_oculatus
ENSNBRG00000020808csde110077.243ENSLAFG00000007150CSDE19677.243Loxodonta_africana
ENSNBRG00000020808csde110077.373ENSMFAG00000003674CSDE110077.373Macaca_fascicularis
ENSNBRG00000020808csde110077.373ENSMMUG00000001974CSDE110077.373Macaca_mulatta
ENSNBRG00000020808csde110077.373ENSMNEG00000045247CSDE19777.373Macaca_nemestrina
ENSNBRG00000020808csde110077.113ENSMLEG00000038673CSDE19477.113Mandrillus_leucophaeus
ENSNBRG00000020808csde110093.628ENSMAMG00000008821csde110093.628Mastacembelus_armatus
ENSNBRG00000020808csde1100100.000ENSMZEG00005021675csde1100100.000Maylandia_zebra
ENSNBRG00000020808csde110079.351ENSMGAG00000016381CSDE110078.961Meleagris_gallopavo
ENSNBRG00000020808csde19975.821ENSMAUG00000014031Csde110075.821Mesocricetus_auratus
ENSNBRG00000020808csde110077.503ENSMICG00000002050CSDE19677.445Microcebus_murinus
ENSNBRG00000020808csde110076.723ENSMOCG00000018960Csde110076.723Microtus_ochrogaster
ENSNBRG00000020808csde110093.238ENSMMOG00000015075csde110093.238Mola_mola
ENSNBRG00000020808csde110077.821ENSMODG00000004685CSDE110075.500Monodelphis_domestica
ENSNBRG00000020808csde110093.238ENSMALG00000007132csde110093.238Monopterus_albus
ENSNBRG00000020808csde110076.853MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSNBRG00000020808csde110076.853ENSMUSG00000068823Csde110084.106Mus_musculus
ENSNBRG00000020808csde110076.853MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSNBRG00000020808csde110076.853MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSNBRG00000020808csde19874.745ENSMPUG00000005753CSDE19974.745Mustela_putorius_furo
ENSNBRG00000020808csde110077.113ENSMLUG00000005681CSDE19477.113Myotis_lucifugus
ENSNBRG00000020808csde19975.672ENSNGAG00000021929Csde110075.672Nannospalax_galili
ENSNBRG00000020808csde19652.000ENSNGAG00000012599-10052.000Nannospalax_galili
ENSNBRG00000020808csde110077.373ENSNLEG00000004842CSDE19777.373Nomascus_leucogenys
ENSNBRG00000020808csde19875.432ENSMEUG00000002677CSDE19975.432Notamacropus_eugenii
ENSNBRG00000020808csde19871.089ENSOPRG00000005002CSDE18271.089Ochotona_princeps
ENSNBRG00000020808csde19652.097ENSODEG00000005979-9852.097Octodon_degus
ENSNBRG00000020808csde19975.970ENSODEG00000007383-10075.970Octodon_degus
ENSNBRG00000020808csde110093.880ENSONIG00000009309csde110093.880Oreochromis_niloticus
ENSNBRG00000020808csde110081.356ENSOANG00000003346-8281.356Ornithorhynchus_anatinus
ENSNBRG00000020808csde110076.983ENSOCUG00000016438CSDE19476.983Oryctolagus_cuniculus
ENSNBRG00000020808csde110091.678ENSORLG00000000707csde110091.678Oryzias_latipes
ENSNBRG00000020808csde110088.346ENSORLG00020005148csde110086.291Oryzias_latipes_hni
ENSNBRG00000020808csde110091.547ENSORLG00015019415csde110091.547Oryzias_latipes_hsok
ENSNBRG00000020808csde110090.897ENSOMEG00000015656csde110091.678Oryzias_melastigma
ENSNBRG00000020808csde110077.503ENSOGAG00000012127CSDE19477.503Otolemur_garnettii
ENSNBRG00000020808csde110077.113ENSOARG00000020034CSDE19477.113Ovis_aries
ENSNBRG00000020808csde110077.373ENSPPAG00000025861CSDE110077.373Pan_paniscus
ENSNBRG00000020808csde110077.633ENSPPRG00000006747CSDE19477.633Panthera_pardus
ENSNBRG00000020808csde110077.633ENSPTIG00000015468CSDE110074.625Panthera_tigris_altaica
ENSNBRG00000020808csde110077.373ENSPTRG00000033721CSDE110074.375Pan_troglodytes
ENSNBRG00000020808csde110077.373ENSPANG00000018873CSDE110077.373Papio_anubis
ENSNBRG00000020808csde110084.785ENSPKIG00000009459csde110084.785Paramormyrops_kingsleyae
ENSNBRG00000020808csde19677.042ENSPSIG00000003823CSDE19676.380Pelodiscus_sinensis
ENSNBRG00000020808csde110090.260ENSPMGG00000000772csde110089.610Periophthalmus_magnuspinnatus
ENSNBRG00000020808csde19976.119ENSPEMG00000020357-10076.119Peromyscus_maniculatus_bairdii
ENSNBRG00000020808csde110075.625ENSPCIG00000022587CSDE110075.625Phascolarctos_cinereus
ENSNBRG00000020808csde19789.736ENSPFOG00000012664csde110090.202Poecilia_formosa
ENSNBRG00000020808csde19584.946ENSPLAG00000017680csde19384.946Poecilia_latipinna
ENSNBRG00000020808csde19585.253ENSPMEG00000005094csde19585.253Poecilia_mexicana
ENSNBRG00000020808csde110087.905ENSPREG00000011631csde110085.301Poecilia_reticulata
ENSNBRG00000020808csde110074.250ENSPPYG00000000996CSDE110074.250Pongo_abelii
ENSNBRG00000020808csde110074.642ENSPCAG00000014368CSDE19474.642Procavia_capensis
ENSNBRG00000020808csde19070.260ENSPCOG00000008223-9270.260Propithecus_coquereli
ENSNBRG00000020808csde110077.633ENSPCOG00000017893CSDE110077.633Propithecus_coquereli
ENSNBRG00000020808csde110072.172ENSPVAG00000008225CSDE19572.172Pteropus_vampyrus
ENSNBRG00000020808csde1100100.000ENSPNYG00000013745csde1100100.000Pundamilia_nyererei
ENSNBRG00000020808csde110086.252ENSPNAG00000001958csde110085.603Pygocentrus_nattereri
ENSNBRG00000020808csde110073.750ENSRNOG00000061058Csde110073.750Rattus_norvegicus
ENSNBRG00000020808csde110074.416ENSRBIG00000038088-10074.416Rhinopithecus_bieti
ENSNBRG00000020808csde110072.987ENSRBIG00000038966-9472.833Rhinopithecus_bieti
ENSNBRG00000020808csde110077.373ENSRROG00000043101CSDE19777.373Rhinopithecus_roxellana
ENSNBRG00000020808csde110077.243ENSSBOG00000035592CSDE19577.243Saimiri_boliviensis_boliviensis
ENSNBRG00000020808csde110078.674ENSSHAG00000009831CSDE110078.674Sarcophilus_harrisii
ENSNBRG00000020808csde110084.805ENSSFOG00015007498csde110084.805Scleropages_formosus
ENSNBRG00000020808csde110093.117ENSSMAG00000007203csde110092.848Scophthalmus_maximus
ENSNBRG00000020808csde110094.408ENSSDUG00000015380csde110094.408Seriola_dumerili
ENSNBRG00000020808csde110094.408ENSSLDG00000008819csde110094.408Seriola_lalandi_dorsalis
ENSNBRG00000020808csde110076.983ENSSARG00000000738CSDE19476.983Sorex_araneus
ENSNBRG00000020808csde110079.714ENSSPUG00000008714CSDE110079.324Sphenodon_punctatus
ENSNBRG00000020808csde110093.368ENSSPAG00000000716csde110093.368Stegastes_partitus
ENSNBRG00000020808csde110077.763ENSSSCG00000006752CSDE110077.763Sus_scrofa
ENSNBRG00000020808csde110075.187ENSTGUG00000000972CSDE110075.187Taeniopygia_guttata
ENSNBRG00000020808csde110086.216ENSTRUG00000007996csde110086.216Takifugu_rubripes
ENSNBRG00000020808csde19385.057ENSTNIG00000010878csde110085.057Tetraodon_nigroviridis
ENSNBRG00000020808csde17580.368ENSTBEG00000011880-6080.368Tupaia_belangeri
ENSNBRG00000020808csde110076.853ENSTTRG00000015583CSDE19476.853Tursiops_truncatus
ENSNBRG00000020808csde19282.353ENSUAMG00000021779-9882.609Ursus_americanus
ENSNBRG00000020808csde18973.034ENSUAMG00000024289-9973.034Ursus_americanus
ENSNBRG00000020808csde110071.001ENSUMAG00000009720-9771.001Ursus_maritimus
ENSNBRG00000020808csde18672.749ENSUMAG00000011714-9972.749Ursus_maritimus
ENSNBRG00000020808csde110080.420ENSVPAG00000000749CSDE17980.420Vicugna_pacos
ENSNBRG00000020808csde19372.886ENSVVUG00000009890CSDE19472.886Vulpes_vulpes
ENSNBRG00000020808csde110075.218ENSXETG00000021448csde110075.218Xenopus_tropicalis
ENSNBRG00000020808csde19494.553ENSXCOG00000000035csde18994.553Xiphophorus_couchianus
ENSNBRG00000020808csde19892.175ENSXMAG00000009080csde19892.175Xiphophorus_maculatus

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