EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000021035 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 16854 bases
Position: chrJH422278.1:14644599-14661452
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027576	zf-met	PF12874.7	6.6e-15	1	2
ENSNBRP00000027576	zf-met	PF12874.7	6.6e-15	2	2
ENSNBRP00000027576	zf-C2H2_jaz	PF12171.8	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000028295	-	405	-	ENSNBRP00000027576	134 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000021035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000021035	zgc:171482	81	73.832	ENSNBRG00000011844	zmat4a	73	73.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021035	zgc:171482	90	95.868	ENSAPOG00000019970	zgc:171482	79	95.868	Acanthochromis_polyacanthus
ENSNBRG00000021035	zgc:171482	87	98.276	ENSACIG00000021512	zgc:171482	87	98.276	Amphilophus_citrinellus
ENSNBRG00000021035	zgc:171482	90	95.868	ENSAOCG00000000751	zgc:171482	89	95.868	Amphiprion_ocellaris
ENSNBRG00000021035	zgc:171482	90	95.868	ENSAPEG00000014154	zgc:171482	87	95.868	Amphiprion_percula
ENSNBRG00000021035	zgc:171482	85	97.368	ENSATEG00000001371	zgc:171482	79	96.552	Anabas_testudineus
ENSNBRG00000021035	zgc:171482	87	98.276	ENSACLG00000010511	zgc:171482	81	98.276	Astatotilapia_calliptera
ENSNBRG00000021035	zgc:171482	98	83.969	ENSAMXG00000002299	zgc:171482	99	83.969	Astyanax_mexicanus
ENSNBRG00000021035	zgc:171482	84	98.214	ENSCSEG00000006509	zgc:171482	73	98.214	Cynoglossus_semilaevis
ENSNBRG00000021035	zgc:171482	87	97.414	ENSCVAG00000013606	zgc:171482	80	97.414	Cyprinodon_variegatus
ENSNBRG00000021035	zgc:171482	96	83.721	ENSDARG00000074415	zgc:171482	96	83.721	Danio_rerio
ENSNBRG00000021035	zgc:171482	87	72.650	ENSELUG00000017517	-	60	85.393	Esox_lucius
ENSNBRG00000021035	zgc:171482	83	98.198	ENSELUG00000021817	zgc:171482	100	83.453	Esox_lucius
ENSNBRG00000021035	zgc:171482	84	99.115	ENSFHEG00000002233	zgc:171482	81	99.115	Fundulus_heteroclitus
ENSNBRG00000021035	zgc:171482	87	95.690	ENSGMOG00000010508	zgc:171482	79	95.690	Gadus_morhua
ENSNBRG00000021035	zgc:171482	87	98.276	ENSGAFG00000009398	zgc:171482	76	98.276	Gambusia_affinis
ENSNBRG00000021035	zgc:171482	87	98.276	ENSGACG00000007680	zgc:171482	80	98.276	Gasterosteus_aculeatus
ENSNBRG00000021035	zgc:171482	87	98.276	ENSHBUG00000023289	zgc:171482	87	98.276	Haplochromis_burtoni
ENSNBRG00000021035	zgc:171482	96	86.822	ENSHCOG00000018086	zgc:171482	96	86.822	Hippocampus_comes
ENSNBRG00000021035	zgc:171482	87	93.966	ENSIPUG00000000361	zgc:171482	84	93.966	Ictalurus_punctatus
ENSNBRG00000021035	zgc:171482	90	94.215	ENSKMAG00000005077	zgc:171482	68	94.215	Kryptolebias_marmoratus
ENSNBRG00000021035	zgc:171482	96	82.857	ENSLBEG00000023823	zgc:171482	100	82.857	Labrus_bergylta
ENSNBRG00000021035	zgc:171482	91	89.344	ENSLOCG00000008863	zgc:171482	77	89.344	Lepisosteus_oculatus
ENSNBRG00000021035	zgc:171482	90	93.388	ENSMAMG00000001031	zgc:171482	76	93.388	Mastacembelus_armatus
ENSNBRG00000021035	zgc:171482	87	92.241	ENSMZEG00005027721	zgc:171482	79	92.241	Maylandia_zebra
ENSNBRG00000021035	zgc:171482	90	95.041	ENSMMOG00000010523	zgc:171482	92	95.041	Mola_mola
ENSNBRG00000021035	zgc:171482	87	97.414	ENSMALG00000017883	zgc:171482	80	97.414	Monopterus_albus
ENSNBRG00000021035	zgc:171482	87	98.276	ENSONIG00000018365	zgc:171482	78	98.276	Oreochromis_niloticus
ENSNBRG00000021035	zgc:171482	96	90.625	ENSORLG00000007607	zgc:171482	80	100.000	Oryzias_latipes
ENSNBRG00000021035	zgc:171482	84	99.115	ENSORLG00020003563	zgc:171482	80	99.115	Oryzias_latipes_hni
ENSNBRG00000021035	zgc:171482	96	90.625	ENSORLG00015008552	zgc:171482	80	100.000	Oryzias_latipes_hsok
ENSNBRG00000021035	zgc:171482	99	84.783	ENSOMEG00000003526	zgc:171482	97	84.783	Oryzias_melastigma
ENSNBRG00000021035	zgc:171482	87	94.828	ENSPKIG00000015911	-	81	94.828	Paramormyrops_kingsleyae
ENSNBRG00000021035	zgc:171482	82	90.909	ENSPKIG00000016244	zgc:171482	83	88.034	Paramormyrops_kingsleyae
ENSNBRG00000021035	zgc:171482	86	98.261	ENSPMGG00000020230	zgc:171482	82	98.261	Periophthalmus_magnuspinnatus
ENSNBRG00000021035	zgc:171482	90	95.041	ENSPFOG00000001974	zgc:171482	78	95.041	Poecilia_formosa
ENSNBRG00000021035	zgc:171482	90	95.041	ENSPLAG00000003327	zgc:171482	79	95.041	Poecilia_latipinna
ENSNBRG00000021035	zgc:171482	90	95.041	ENSPMEG00000004988	zgc:171482	73	95.041	Poecilia_mexicana
ENSNBRG00000021035	zgc:171482	90	95.041	ENSPREG00000019241	zgc:171482	88	95.041	Poecilia_reticulata
ENSNBRG00000021035	zgc:171482	87	98.276	ENSPNYG00000007773	zgc:171482	81	98.276	Pundamilia_nyererei
ENSNBRG00000021035	zgc:171482	85	93.860	ENSPNAG00000007619	zgc:171482	79	93.860	Pygocentrus_nattereri
ENSNBRG00000021035	zgc:171482	87	89.655	ENSSFOG00015016149	zgc:171482	93	89.655	Scleropages_formosus
ENSNBRG00000021035	zgc:171482	87	90.517	ENSSFOG00015021238	zgc:171482	78	90.517	Scleropages_formosus
ENSNBRG00000021035	zgc:171482	87	97.414	ENSSMAG00000002715	zgc:171482	74	97.414	Scophthalmus_maximus
ENSNBRG00000021035	zgc:171482	90	95.041	ENSSDUG00000008773	zgc:171482	85	95.041	Seriola_dumerili
ENSNBRG00000021035	zgc:171482	90	95.041	ENSSLDG00000019510	zgc:171482	85	95.041	Seriola_lalandi_dorsalis
ENSNBRG00000021035	zgc:171482	90	95.041	ENSSPAG00000013724	zgc:171482	96	95.041	Stegastes_partitus
ENSNBRG00000021035	zgc:171482	85	97.368	ENSTRUG00000005705	zgc:171482	68	97.368	Takifugu_rubripes
ENSNBRG00000021035	zgc:171482	84	76.106	ENSTNIG00000008679	zgc:171482	80	76.106	Tetraodon_nigroviridis
ENSNBRG00000021035	zgc:171482	74	86.957	ENSXETG00000013525	zmat4	78	86.957	Xenopus_tropicalis
ENSNBRG00000021035	zgc:171482	87	87.179	ENSXMAG00000002641	zgc:171482	75	87.179	Xiphophorus_maculatus