EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000021247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 105304 bases
Position: chrJH422411.1:106917-212220
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027907	zf-C2H2	PF00096.26	5.5e-21	1	4
ENSNBRP00000027907	zf-C2H2	PF00096.26	5.5e-21	2	4
ENSNBRP00000027907	zf-C2H2	PF00096.26	5.5e-21	3	4
ENSNBRP00000027907	zf-C2H2	PF00096.26	5.5e-21	4	4
ENSNBRP00000027945	zf-C2H2	PF00096.26	1.2e-15	1	3
ENSNBRP00000027945	zf-C2H2	PF00096.26	1.2e-15	2	3
ENSNBRP00000027945	zf-C2H2	PF00096.26	1.2e-15	3	3
ENSNBRP00000027917	zf-C2H2	PF00096.26	5.6e-14	1	3
ENSNBRP00000027917	zf-C2H2	PF00096.26	5.6e-14	2	3
ENSNBRP00000027917	zf-C2H2	PF00096.26	5.6e-14	3	3
ENSNBRP00000027930	zf-C2H2	PF00096.26	3.2e-11	1	3
ENSNBRP00000027930	zf-C2H2	PF00096.26	3.2e-11	2	3
ENSNBRP00000027930	zf-C2H2	PF00096.26	3.2e-11	3	3
ENSNBRP00000027945	zf-met	PF12874.7	6e-05	1	1
ENSNBRP00000027907	zf-met	PF12874.7	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000028635	-	1533	-	ENSNBRP00000027907	510 (aa)	-	-
ENSNBRT00000028645	-	1044	-	ENSNBRP00000027917	347 (aa)	-	-
ENSNBRT00000028658	-	855	-	ENSNBRP00000027930	284 (aa)	-	-
ENSNBRT00000028674	-	993	-	ENSNBRP00000027945	330 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000021247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000021247	-	79	40.336	ENSNBRG00000018449	PRDM15	50	40.336
ENSNBRG00000021247	-	58	51.724	ENSNBRG00000000960	-	99	51.807
ENSNBRG00000021247	-	56	38.462	ENSNBRG00000016666	-	96	51.408
ENSNBRG00000021247	-	98	46.729	ENSNBRG00000013838	-	99	46.729
ENSNBRG00000021247	-	54	41.818	ENSNBRG00000004557	-	83	45.217
ENSNBRG00000021247	-	55	51.190	ENSNBRG00000015873	-	94	54.098
ENSNBRG00000021247	-	56	46.789	ENSNBRG00000007384	-	51	49.635
ENSNBRG00000021247	-	58	45.122	ENSNBRG00000009075	znf236	75	39.130
ENSNBRG00000021247	-	61	44.828	ENSNBRG00000019987	GZF1	62	47.170
ENSNBRG00000021247	-	93	31.707	ENSNBRG00000018141	-	95	31.707
ENSNBRG00000021247	-	52	45.217	ENSNBRG00000005805	-	95	45.122
ENSNBRG00000021247	-	63	43.966	ENSNBRG00000016577	si:dkey-182i3.9	90	43.966
ENSNBRG00000021247	-	63	38.710	ENSNBRG00000013796	zbtb18	51	38.710
ENSNBRG00000021247	-	95	44.186	ENSNBRG00000007335	zbtb24	64	44.186
ENSNBRG00000021247	-	96	36.047	ENSNBRG00000016032	patz1	58	36.047
ENSNBRG00000021247	-	62	50.000	ENSNBRG00000024020	-	74	50.000
ENSNBRG00000021247	-	61	45.872	ENSNBRG00000024054	-	56	51.220
ENSNBRG00000021247	-	50	51.220	ENSNBRG00000024051	-	51	51.220
ENSNBRG00000021247	-	69	47.170	ENSNBRG00000005823	-	83	47.407
ENSNBRG00000021247	-	59	49.351	ENSNBRG00000003250	-	89	49.351
ENSNBRG00000021247	-	99	44.928	ENSNBRG00000021960	zbtb17	96	44.928
ENSNBRG00000021247	-	57	41.667	ENSNBRG00000021967	-	78	41.667
ENSNBRG00000021247	-	67	51.754	ENSNBRG00000003124	-	95	51.724
ENSNBRG00000021247	-	57	39.450	ENSNBRG00000024293	-	85	44.231
ENSNBRG00000021247	-	50	51.852	ENSNBRG00000023229	-	78	51.852
ENSNBRG00000021247	-	63	48.315	ENSNBRG00000024345	-	99	48.315
ENSNBRG00000021247	-	96	42.982	ENSNBRG00000004792	-	99	42.982
ENSNBRG00000021247	-	95	45.631	ENSNBRG00000019459	zbtb49	71	45.312
ENSNBRG00000021247	-	50	52.727	ENSNBRG00000024086	-	58	53.623
ENSNBRG00000021247	-	97	41.758	ENSNBRG00000002571	bcl6b	91	46.552
ENSNBRG00000021247	-	72	49.153	ENSNBRG00000002902	-	98	51.449
ENSNBRG00000021247	-	54	54.688	ENSNBRG00000006125	-	91	54.688
ENSNBRG00000021247	-	96	45.055	ENSNBRG00000006757	-	97	45.055
ENSNBRG00000021247	-	57	55.963	ENSNBRG00000014088	-	98	55.556
ENSNBRG00000021247	-	50	45.455	ENSNBRG00000024179	-	61	46.000
ENSNBRG00000021247	-	95	32.673	ENSNBRG00000014299	znf131	75	32.673
ENSNBRG00000021247	-	61	53.488	ENSNBRG00000009128	-	100	46.226
ENSNBRG00000021247	-	61	49.541	ENSNBRG00000023956	-	67	49.541
ENSNBRG00000021247	-	50	56.897	ENSNBRG00000015442	ZNF319	80	56.897
ENSNBRG00000021247	-	57	51.579	ENSNBRG00000019481	-	90	51.579
ENSNBRG00000021247	-	68	38.667	ENSNBRG00000010364	si:ch211-236k19.4	90	38.667
ENSNBRG00000021247	-	54	44.792	ENSNBRG00000015774	gfi1ab	60	44.792
ENSNBRG00000021247	-	53	51.376	ENSNBRG00000016234	-	66	50.617
ENSNBRG00000021247	-	62	42.727	ENSNBRG00000023960	-	90	42.727
ENSNBRG00000021247	-	52	39.080	ENSNBRG00000004976	prdm5	66	42.169
ENSNBRG00000021247	-	63	52.727	ENSNBRG00000024066	-	97	46.281
ENSNBRG00000021247	-	60	49.573	ENSNBRG00000000321	-	93	52.381
ENSNBRG00000021247	-	59	35.366	ENSNBRG00000005175	zbtb41	73	39.815
ENSNBRG00000021247	-	58	51.667	ENSNBRG00000016603	-	91	51.562
ENSNBRG00000021247	-	62	46.226	ENSNBRG00000010987	-	86	46.226
ENSNBRG00000021247	-	58	52.294	ENSNBRG00000016169	-	66	54.321
ENSNBRG00000021247	-	53	42.742	ENSNBRG00000004523	-	90	44.068
ENSNBRG00000021247	-	50	39.744	ENSNBRG00000018718	zbtb47b	68	52.055
ENSNBRG00000021247	-	67	41.304	ENSNBRG00000020589	hic2	54	41.304
ENSNBRG00000021247	-	51	54.217	ENSNBRG00000016282	-	91	56.140
ENSNBRG00000021247	-	68	50.000	ENSNBRG00000016639	-	60	50.000
ENSNBRG00000021247	-	59	40.909	ENSNBRG00000009815	-	87	40.909
ENSNBRG00000021247	-	63	50.000	ENSNBRG00000021237	-	84	49.254
ENSNBRG00000021247	-	52	53.153	ENSNBRG00000001163	-	98	51.163
ENSNBRG00000021247	-	95	52.294	ENSNBRG00000021375	-	90	52.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021247	-	76	68.644	ENSCAPG00000009177	ZBTB40	52	68.644	Cavia_aperea
ENSNBRG00000021247	-	74	54.777	ENSFCAG00000028182	ZBTB40	50	51.705	Felis_catus
ENSNBRG00000021247	-	84	53.797	ENSMUSG00000060862	Zbtb40	86	42.991	Mus_musculus
ENSNBRG00000021247	-	96	45.614	ENSTRUG00000022515	-	100	45.614	Takifugu_rubripes
ENSNBRG00000021247	-	99	50.886	ENSXCOG00000010422	-	94	58.824	Xiphophorus_couchianus