EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000021252 (Gene tree)
Gene ID: 102786806
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5818 bases
Position: chrJH422388.1:214705-220522
Accession: 102786806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000027872	RNA_ligase	PF09414.10	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000028598	-	4514	XM_006804070	ENSNBRP00000027872	910 (aa)	XP_006804133	UPI0003EBD092

Gene Model

Click here to download ENSNBRG00000021252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021252	lig4	99	66.227	ENSG00000174405	LIG4	99	66.785	Homo_sapiens
ENSNBRG00000021252	lig4	99	90.209	ENSAPOG00000000866	lig4	100	90.110	Acanthochromis_polyacanthus
ENSNBRG00000021252	lig4	99	64.114	ENSAMEG00000019685	LIG4	99	64.114	Ailuropoda_melanoleuca
ENSNBRG00000021252	lig4	100	93.297	ENSACIG00000018309	lig4	100	93.297	Amphilophus_citrinellus
ENSNBRG00000021252	lig4	99	90.319	ENSAOCG00000011768	lig4	100	90.220	Amphiprion_ocellaris
ENSNBRG00000021252	lig4	100	90.220	ENSAPEG00000017815	lig4	100	90.220	Amphiprion_percula
ENSNBRG00000021252	lig4	99	87.996	ENSATEG00000005583	lig4	99	87.996	Anabas_testudineus
ENSNBRG00000021252	lig4	96	67.086	ENSAPLG00000001673	LIG4	99	67.086	Anas_platyrhynchos
ENSNBRG00000021252	lig4	99	68.217	ENSACAG00000014566	LIG4	99	68.217	Anolis_carolinensis
ENSNBRG00000021252	lig4	99	65.457	ENSANAG00000012446	LIG4	99	65.457	Aotus_nancymaae
ENSNBRG00000021252	lig4	100	99.011	ENSACLG00000027051	lig4	100	99.011	Astatotilapia_calliptera
ENSNBRG00000021252	lig4	99	80.065	ENSAMXG00000008192	lig4	95	80.065	Astyanax_mexicanus
ENSNBRG00000021252	lig4	99	65.055	ENSBTAG00000015868	LIG4	99	65.055	Bos_taurus
ENSNBRG00000021252	lig4	99	65.347	ENSCJAG00000014689	LIG4	99	65.347	Callithrix_jacchus
ENSNBRG00000021252	lig4	99	64.835	ENSCAFG00000006031	LIG4	99	64.835	Canis_familiaris
ENSNBRG00000021252	lig4	99	64.835	ENSCAFG00020021230	LIG4	99	64.835	Canis_lupus_dingo
ENSNBRG00000021252	lig4	99	65.055	ENSCHIG00000001019	LIG4	99	65.055	Capra_hircus
ENSNBRG00000021252	lig4	98	65.188	ENSCAPG00000006284	LIG4	99	65.188	Cavia_aperea
ENSNBRG00000021252	lig4	99	65.017	ENSCPOG00000014266	LIG4	99	65.017	Cavia_porcellus
ENSNBRG00000021252	lig4	99	66.007	ENSCCAG00000019971	LIG4	99	66.007	Cebus_capucinus
ENSNBRG00000021252	lig4	98	65.854	ENSCATG00000021075	LIG4	99	65.854	Cercocebus_atys
ENSNBRG00000021252	lig4	99	65.567	ENSCLAG00000003376	LIG4	99	65.567	Chinchilla_lanigera
ENSNBRG00000021252	lig4	99	65.787	ENSCSAG00000000211	LIG4	99	65.677	Chlorocebus_sabaeus
ENSNBRG00000021252	lig4	98	68.556	ENSCPBG00000023291	LIG4	99	68.018	Chrysemys_picta_bellii
ENSNBRG00000021252	lig4	69	47.484	ENSCING00000009536	-	97	47.484	Ciona_intestinalis
ENSNBRG00000021252	lig4	83	45.000	ENSCSAVG00000010336	-	98	45.000	Ciona_savignyi
ENSNBRG00000021252	lig4	99	65.567	ENSCANG00000005805	LIG4	99	65.567	Colobus_angolensis_palliatus
ENSNBRG00000021252	lig4	99	65.385	ENSCGRG00001012072	Lig4	99	65.060	Cricetulus_griseus_chok1gshd
ENSNBRG00000021252	lig4	99	65.385	ENSCGRG00000013417	Lig4	99	65.060	Cricetulus_griseus_crigri
ENSNBRG00000021252	lig4	97	84.667	ENSCSEG00000013905	lig4	96	84.667	Cynoglossus_semilaevis
ENSNBRG00000021252	lig4	100	87.377	ENSCVAG00000007896	lig4	100	87.377	Cyprinodon_variegatus
ENSNBRG00000021252	lig4	99	80.198	ENSDARG00000060620	lig4	99	80.198	Danio_rerio
ENSNBRG00000021252	lig4	99	65.495	ENSDNOG00000000513	LIG4	99	65.495	Dasypus_novemcinctus
ENSNBRG00000021252	lig4	98	65.743	ENSDORG00000027303	Lig4	99	65.743	Dipodomys_ordii
ENSNBRG00000021252	lig4	93	30.891	FBgn0030506	Lig4	93	30.891	Drosophila_melanogaster
ENSNBRG00000021252	lig4	98	63.374	ENSETEG00000015563	LIG4	99	63.596	Echinops_telfairi
ENSNBRG00000021252	lig4	99	44.351	ENSEBUG00000014243	lig4	99	43.933	Eptatretus_burgeri
ENSNBRG00000021252	lig4	99	65.275	ENSEASG00005022073	LIG4	99	65.275	Equus_asinus_asinus
ENSNBRG00000021252	lig4	99	65.495	ENSECAG00000003257	LIG4	99	65.495	Equus_caballus
ENSNBRG00000021252	lig4	98	83.204	ENSELUG00000006787	lig4	99	83.315	Esox_lucius
ENSNBRG00000021252	lig4	99	63.846	ENSFCAG00000031985	LIG4	99	63.846	Felis_catus
ENSNBRG00000021252	lig4	89	68.564	ENSFALG00000004214	LIG4	98	68.564	Ficedula_albicollis
ENSNBRG00000021252	lig4	99	64.356	ENSFDAG00000008973	LIG4	99	64.356	Fukomys_damarensis
ENSNBRG00000021252	lig4	100	87.925	ENSFHEG00000007398	lig4	90	88.022	Fundulus_heteroclitus
ENSNBRG00000021252	lig4	85	77.378	ENSGMOG00000012843	lig4	99	77.378	Gadus_morhua
ENSNBRG00000021252	lig4	99	65.862	ENSGALG00000016854	LIG4	99	65.862	Gallus_gallus
ENSNBRG00000021252	lig4	99	86.637	ENSGAFG00000019779	lig4	96	86.966	Gambusia_affinis
ENSNBRG00000021252	lig4	99	84.309	ENSGACG00000014135	lig4	99	84.309	Gasterosteus_aculeatus
ENSNBRG00000021252	lig4	99	66.007	ENSGGOG00000027771	LIG4	99	66.007	Gorilla_gorilla
ENSNBRG00000021252	lig4	100	98.791	ENSHBUG00000006245	lig4	100	98.791	Haplochromis_burtoni
ENSNBRG00000021252	lig4	99	64.868	ENSHGLG00000000718	LIG4	99	64.868	Heterocephalus_glaber_female
ENSNBRG00000021252	lig4	99	64.868	ENSHGLG00100003265	LIG4	99	64.868	Heterocephalus_glaber_male
ENSNBRG00000021252	lig4	99	81.010	ENSHCOG00000012010	lig4	99	81.010	Hippocampus_comes
ENSNBRG00000021252	lig4	100	77.912	ENSIPUG00000013748	lig4	100	77.912	Ictalurus_punctatus
ENSNBRG00000021252	lig4	99	65.127	ENSSTOG00000024303	LIG4	99	64.803	Ictidomys_tridecemlineatus
ENSNBRG00000021252	lig4	99	65.127	ENSJJAG00000006750	Lig4	99	64.693	Jaculus_jaculus
ENSNBRG00000021252	lig4	99	84.598	ENSKMAG00000001149	lig4	99	84.598	Kryptolebias_marmoratus
ENSNBRG00000021252	lig4	91	88.242	ENSLBEG00000014578	lig4	99	88.242	Labrus_bergylta
ENSNBRG00000021252	lig4	99	67.728	ENSLACG00000003282	LIG4	99	67.728	Latimeria_chalumnae
ENSNBRG00000021252	lig4	99	72.368	ENSLOCG00000008901	lig4	99	72.368	Lepisosteus_oculatus
ENSNBRG00000021252	lig4	99	64.544	ENSLAFG00000031152	LIG4	99	64.544	Loxodonta_africana
ENSNBRG00000021252	lig4	99	65.787	ENSMFAG00000037235	LIG4	99	65.787	Macaca_fascicularis
ENSNBRG00000021252	lig4	99	65.677	ENSMMUG00000008874	LIG4	99	65.677	Macaca_mulatta
ENSNBRG00000021252	lig4	99	65.787	ENSMNEG00000023575	LIG4	99	65.787	Macaca_nemestrina
ENSNBRG00000021252	lig4	99	65.567	ENSMLEG00000026720	LIG4	99	65.567	Mandrillus_leucophaeus
ENSNBRG00000021252	lig4	100	88.132	ENSMAMG00000008472	lig4	99	88.132	Mastacembelus_armatus
ENSNBRG00000021252	lig4	100	98.791	ENSMZEG00005001855	lig4	100	98.791	Maylandia_zebra
ENSNBRG00000021252	lig4	99	65.862	ENSMGAG00000015532	LIG4	99	65.862	Meleagris_gallopavo
ENSNBRG00000021252	lig4	99	63.806	ENSMOCG00000019000	Lig4	99	63.806	Microtus_ochrogaster
ENSNBRG00000021252	lig4	100	86.813	ENSMMOG00000004390	lig4	100	86.813	Mola_mola
ENSNBRG00000021252	lig4	99	66.813	ENSMODG00000025064	LIG4	99	66.813	Monodelphis_domestica
ENSNBRG00000021252	lig4	100	87.253	ENSMALG00000008555	lig4	100	87.253	Monopterus_albus
ENSNBRG00000021252	lig4	99	65.457	MGP_CAROLIEiJ_G0030809	Lig4	99	65.132	Mus_caroli
ENSNBRG00000021252	lig4	99	65.017	ENSMUSG00000049717	Lig4	99	64.693	Mus_musculus
ENSNBRG00000021252	lig4	99	65.017	MGP_PahariEiJ_G0021270	Lig4	99	64.906	Mus_pahari
ENSNBRG00000021252	lig4	99	65.237	MGP_SPRETEiJ_G0031917	Lig4	99	64.912	Mus_spretus
ENSNBRG00000021252	lig4	99	64.945	ENSMPUG00000018675	LIG4	99	64.945	Mustela_putorius_furo
ENSNBRG00000021252	lig4	99	65.495	ENSMLUG00000001267	LIG4	99	65.495	Myotis_lucifugus
ENSNBRG00000021252	lig4	99	65.457	ENSNGAG00000013258	Lig4	99	65.347	Nannospalax_galili
ENSNBRG00000021252	lig4	99	65.677	ENSNLEG00000007888	LIG4	99	65.677	Nomascus_leucogenys
ENSNBRG00000021252	lig4	99	64.466	ENSOPRG00000005765	LIG4	99	64.356	Ochotona_princeps
ENSNBRG00000021252	lig4	99	64.356	ENSODEG00000019683	LIG4	99	64.356	Octodon_degus
ENSNBRG00000021252	lig4	100	97.253	ENSONIG00000011969	lig4	99	97.253	Oreochromis_niloticus
ENSNBRG00000021252	lig4	99	64.796	ENSOCUG00000015734	LIG4	99	64.686	Oryctolagus_cuniculus
ENSNBRG00000021252	lig4	99	85.071	ENSORLG00000004041	lig4	99	85.071	Oryzias_latipes
ENSNBRG00000021252	lig4	99	84.962	ENSORLG00020019607	lig4	99	84.962	Oryzias_latipes_hni
ENSNBRG00000021252	lig4	99	85.071	ENSORLG00015017754	lig4	99	85.071	Oryzias_latipes_hsok
ENSNBRG00000021252	lig4	75	89.374	ENSOMEG00000003459	lig4	99	89.374	Oryzias_melastigma
ENSNBRG00000021252	lig4	99	65.717	ENSOGAG00000032120	LIG4	99	65.717	Otolemur_garnettii
ENSNBRG00000021252	lig4	81	69.086	ENSOARG00000005590	LIG4	98	69.086	Ovis_aries
ENSNBRG00000021252	lig4	99	66.007	ENSPPAG00000032998	LIG4	99	66.007	Pan_paniscus
ENSNBRG00000021252	lig4	99	64.505	ENSPPRG00000017804	LIG4	99	64.505	Panthera_pardus
ENSNBRG00000021252	lig4	99	64.396	ENSPTIG00000010051	LIG4	99	64.396	Panthera_tigris_altaica
ENSNBRG00000021252	lig4	99	66.117	ENSPTRG00000006025	LIG4	99	66.117	Pan_troglodytes
ENSNBRG00000021252	lig4	98	65.965	ENSPANG00000007562	LIG4	99	65.965	Papio_anubis
ENSNBRG00000021252	lig4	99	78.256	ENSPKIG00000011645	lig4	98	78.256	Paramormyrops_kingsleyae
ENSNBRG00000021252	lig4	99	67.947	ENSPSIG00000001504	LIG4	99	67.947	Pelodiscus_sinensis
ENSNBRG00000021252	lig4	98	81.075	ENSPMGG00000013486	lig4	99	80.308	Periophthalmus_magnuspinnatus
ENSNBRG00000021252	lig4	99	64.725	ENSPEMG00000000076	Lig4	99	64.725	Peromyscus_maniculatus_bairdii
ENSNBRG00000021252	lig4	99	65.604	ENSPCIG00000021882	LIG4	99	65.604	Phascolarctos_cinereus
ENSNBRG00000021252	lig4	100	87.281	ENSPFOG00000000797	lig4	99	87.706	Poecilia_formosa
ENSNBRG00000021252	lig4	100	87.281	ENSPLAG00000001196	lig4	99	87.706	Poecilia_latipinna
ENSNBRG00000021252	lig4	100	87.281	ENSPMEG00000021353	lig4	99	87.706	Poecilia_mexicana
ENSNBRG00000021252	lig4	100	86.952	ENSPREG00000007323	lig4	100	87.281	Poecilia_reticulata
ENSNBRG00000021252	lig4	99	65.457	ENSPPYG00000005540	LIG4	99	65.457	Pongo_abelii
ENSNBRG00000021252	lig4	99	64.615	ENSPVAG00000016403	LIG4	99	64.294	Pteropus_vampyrus
ENSNBRG00000021252	lig4	100	98.681	ENSPNYG00000009660	lig4	100	98.681	Pundamilia_nyererei
ENSNBRG00000021252	lig4	98	81.585	ENSPNAG00000028056	lig4	99	81.585	Pygocentrus_nattereri
ENSNBRG00000021252	lig4	98	81.585	ENSPNAG00000028069	LIG4	99	81.585	Pygocentrus_nattereri
ENSNBRG00000021252	lig4	99	64.796	ENSRNOG00000014605	Lig4	99	64.686	Rattus_norvegicus
ENSNBRG00000021252	lig4	99	64.906	ENSRBIG00000039962	LIG4	99	64.906	Rhinopithecus_bieti
ENSNBRG00000021252	lig4	99	65.567	ENSRROG00000006040	LIG4	99	65.567	Rhinopithecus_roxellana
ENSNBRG00000021252	lig4	99	65.457	ENSSBOG00000019029	LIG4	99	65.457	Saimiri_boliviensis_boliviensis
ENSNBRG00000021252	lig4	99	63.516	ENSSHAG00000009525	LIG4	99	63.308	Sarcophilus_harrisii
ENSNBRG00000021252	lig4	100	78.791	ENSSFOG00015012835	lig4	100	78.791	Scleropages_formosus
ENSNBRG00000021252	lig4	100	83.297	ENSSMAG00000011267	lig4	100	83.297	Scophthalmus_maximus
ENSNBRG00000021252	lig4	100	87.309	ENSSDUG00000010343	lig4	99	87.623	Seriola_dumerili
ENSNBRG00000021252	lig4	100	86.324	ENSSLDG00000003239	lig4	99	86.418	Seriola_lalandi_dorsalis
ENSNBRG00000021252	lig4	99	63.048	ENSSARG00000006573	LIG4	99	63.048	Sorex_araneus
ENSNBRG00000021252	lig4	92	69.487	ENSSPUG00000002444	LIG4	99	69.368	Sphenodon_punctatus
ENSNBRG00000021252	lig4	99	89.989	ENSSPAG00000001609	lig4	99	89.989	Stegastes_partitus
ENSNBRG00000021252	lig4	99	65.160	ENSSSCG00000009540	LIG4	99	65.160	Sus_scrofa
ENSNBRG00000021252	lig4	99	66.518	ENSTGUG00000010795	LIG4	99	66.518	Taeniopygia_guttata
ENSNBRG00000021252	lig4	99	84.378	ENSTRUG00000009984	lig4	99	84.378	Takifugu_rubripes
ENSNBRG00000021252	lig4	99	82.288	ENSTNIG00000010348	lig4	99	82.508	Tetraodon_nigroviridis
ENSNBRG00000021252	lig4	99	65.787	ENSTBEG00000017741	LIG4	99	65.787	Tupaia_belangeri
ENSNBRG00000021252	lig4	99	65.017	ENSTTRG00000012660	LIG4	99	65.017	Tursiops_truncatus
ENSNBRG00000021252	lig4	99	63.956	ENSUAMG00000003773	LIG4	99	63.956	Ursus_americanus
ENSNBRG00000021252	lig4	99	67.179	ENSXETG00000002654	lig4	99	67.179	Xenopus_tropicalis
ENSNBRG00000021252	lig4	100	87.171	ENSXCOG00000017401	lig4	99	87.267	Xiphophorus_couchianus
ENSNBRG00000021252	lig4	100	87.390	ENSXMAG00000015142	lig4	99	87.486	Xiphophorus_maculatus