EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000021487 (Gene tree)
Gene ID: 102781182
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7756 bases
Position: chrJH422309.1:2550241-2557996
Accession: 102781182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000028187	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000028928	-	5911	XM_006795238	ENSNBRP00000028187	266 (aa)	XP_006795301	UPI0003EBCB71

Gene Model

Click here to download ENSNBRG00000021487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000021487	rab42a	62	36.585	ENSNBRG00000016922	-	73	36.585
ENSNBRG00000021487	rab42a	59	43.671	ENSNBRG00000007077	rab33ba	61	43.671
ENSNBRG00000021487	rab42a	82	54.128	ENSNBRG00000005082	RAB39B	100	54.128
ENSNBRG00000021487	rab42a	69	41.530	ENSNBRG00000000372	rab11bb	83	41.530
ENSNBRG00000021487	rab42a	61	39.521	ENSNBRG00000013940	rab9b	74	39.521
ENSNBRG00000021487	rab42a	59	32.278	ENSNBRG00000000489	rabl2	68	32.278
ENSNBRG00000021487	rab42a	67	41.011	ENSNBRG00000003873	rab1ba	91	40.217
ENSNBRG00000021487	rab42a	80	35.648	ENSNBRG00000002778	RAB15	98	35.648
ENSNBRG00000021487	rab42a	63	37.427	ENSNBRG00000008714	RAB29	74	37.427
ENSNBRG00000021487	rab42a	62	34.940	ENSNBRG00000017793	RAB17	73	34.940
ENSNBRG00000021487	rab42a	70	40.860	ENSNBRG00000002726	-	86	40.860
ENSNBRG00000021487	rab42a	74	31.188	ENSNBRG00000019750	rab34a	77	31.188
ENSNBRG00000021487	rab42a	70	30.208	ENSNBRG00000007544	rab32b	87	30.208
ENSNBRG00000021487	rab42a	72	30.244	ENSNBRG00000011713	rasl11a	78	30.244
ENSNBRG00000021487	rab42a	55	41.216	ENSNBRG00000022235	rab33a	62	41.216
ENSNBRG00000021487	rab42a	71	47.340	ENSNBRG00000001241	rab2a	89	46.842
ENSNBRG00000021487	rab42a	64	41.379	ENSNBRG00000002684	zgc:101559	74	41.379
ENSNBRG00000021487	rab42a	61	34.337	ENSNBRG00000002772	-	79	34.337
ENSNBRG00000021487	rab42a	57	36.842	ENSNBRG00000014613	si:ch73-116o1.2	79	36.145
ENSNBRG00000021487	rab42a	71	40.526	ENSNBRG00000014428	rab12	94	36.929
ENSNBRG00000021487	rab42a	82	55.046	ENSNBRG00000018106	-	100	55.046
ENSNBRG00000021487	rab42a	79	32.701	ENSNBRG00000013673	rab6ba	94	32.701
ENSNBRG00000021487	rab42a	61	35.802	ENSNBRG00000011763	rab5aa	74	35.802
ENSNBRG00000021487	rab42a	61	39.157	ENSNBRG00000024340	RAB9A	77	39.157
ENSNBRG00000021487	rab42a	69	41.530	ENSNBRG00000012893	rab11a	84	41.530
ENSNBRG00000021487	rab42a	62	39.394	ENSNBRG00000013507	rab18a	80	39.394
ENSNBRG00000021487	rab42a	55	42.105	ENSNBRG00000017996	-	65	42.105
ENSNBRG00000021487	rab42a	67	42.135	ENSNBRG00000020492	-	87	42.135
ENSNBRG00000021487	rab42a	69	42.391	ENSNBRG00000023898	rab11ba	70	42.391
ENSNBRG00000021487	rab42a	79	36.916	ENSNBRG00000001056	rab15	96	36.916
ENSNBRG00000021487	rab42a	69	42.077	ENSNBRG00000005116	rab11al	84	42.077
ENSNBRG00000021487	rab42a	70	33.333	ENSNBRG00000013795	rheb	94	33.333
ENSNBRG00000021487	rab42a	57	33.775	ENSNBRG00000004403	kras	86	32.927
ENSNBRG00000021487	rab42a	62	35.976	ENSNBRG00000018165	rab5c	74	35.976
ENSNBRG00000021487	rab42a	64	42.012	ENSNBRG00000004124	rab13	95	39.286
ENSNBRG00000021487	rab42a	59	34.177	ENSNBRG00000013691	rab23	74	34.641
ENSNBRG00000021487	rab42a	60	44.375	ENSNBRG00000002082	rab30	72	44.375
ENSNBRG00000021487	rab42a	62	41.818	ENSNBRG00000008137	rab18b	80	41.818
ENSNBRG00000021487	rab42a	79	30.047	ENSNBRG00000002825	-	96	30.047
ENSNBRG00000021487	rab42a	59	39.623	ENSNBRG00000023214	si:dkey-13a21.4	76	39.623
ENSNBRG00000021487	rab42a	61	34.337	ENSNBRG00000021829	RAB7A	79	34.337
ENSNBRG00000021487	rab42a	59	39.490	ENSNBRG00000022702	rab41	73	39.490
ENSNBRG00000021487	rab42a	63	44.311	ENSNBRG00000006202	zgc:171927	78	44.311
ENSNBRG00000021487	rab42a	62	43.902	ENSNBRG00000008930	si:dkey-16l2.16	77	43.902
ENSNBRG00000021487	rab42a	63	31.737	ENSNBRG00000016978	rhebl1	88	31.737
ENSNBRG00000021487	rab42a	59	39.490	ENSNBRG00000016716	rab6a	75	39.490
ENSNBRG00000021487	rab42a	69	41.530	ENSNBRG00000023885	-	83	41.530
ENSNBRG00000021487	rab42a	79	39.713	ENSNBRG00000011607	rab25a	96	39.713
ENSNBRG00000021487	rab42a	80	38.318	ENSNBRG00000005542	-	97	38.318
ENSNBRG00000021487	rab42a	58	38.562	ENSNBRG00000015905	rab6bb	76	38.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021487	rab42a	82	96.789	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSNBRG00000021487	rab42a	82	97.706	ENSACIG00000003102	rab42a	100	97.706	Amphilophus_citrinellus
ENSNBRG00000021487	rab42a	89	95.339	ENSAOCG00000012921	rab42a	95	93.281	Amphiprion_ocellaris
ENSNBRG00000021487	rab42a	89	95.339	ENSAPEG00000007713	rab42a	95	93.281	Amphiprion_percula
ENSNBRG00000021487	rab42a	82	94.037	ENSATEG00000009052	rab42a	100	94.037	Anabas_testudineus
ENSNBRG00000021487	rab42a	82	99.541	ENSACLG00000007514	rab42a	100	99.541	Astatotilapia_calliptera
ENSNBRG00000021487	rab42a	82	91.743	ENSAMXG00000032729	rab42a	100	91.743	Astyanax_mexicanus
ENSNBRG00000021487	rab42a	82	94.037	ENSCSEG00000010582	rab42a	100	94.037	Cynoglossus_semilaevis
ENSNBRG00000021487	rab42a	82	91.284	ENSDARG00000034215	rab42a	100	91.284	Danio_rerio
ENSNBRG00000021487	rab42a	82	47.032	ENSDARG00000102580	CU571310.1	99	47.032	Danio_rerio
ENSNBRG00000021487	rab42a	82	90.367	ENSELUG00000010345	rab42a	100	90.367	Esox_lucius
ENSNBRG00000021487	rab42a	82	95.413	ENSFHEG00000013106	rab42a	100	95.413	Fundulus_heteroclitus
ENSNBRG00000021487	rab42a	82	94.495	ENSGAFG00000002141	rab42a	100	94.495	Gambusia_affinis
ENSNBRG00000021487	rab42a	100	98.872	ENSHBUG00000015126	rab42a	100	98.872	Haplochromis_burtoni
ENSNBRG00000021487	rab42a	82	88.532	ENSIPUG00000011376	rab42a	100	88.532	Ictalurus_punctatus
ENSNBRG00000021487	rab42a	82	94.954	ENSKMAG00000007267	rab42a	100	94.954	Kryptolebias_marmoratus
ENSNBRG00000021487	rab42a	82	95.413	ENSLBEG00000001193	rab42a	100	96.330	Labrus_bergylta
ENSNBRG00000021487	rab42a	82	63.761	ENSLACG00000012755	-	100	63.761	Latimeria_chalumnae
ENSNBRG00000021487	rab42a	82	51.142	ENSLOCG00000015825	-	99	51.142	Lepisosteus_oculatus
ENSNBRG00000021487	rab42a	82	83.028	ENSLOCG00000003453	rab42a	100	83.028	Lepisosteus_oculatus
ENSNBRG00000021487	rab42a	82	97.706	ENSMAMG00000002296	rab42a	100	97.706	Mastacembelus_armatus
ENSNBRG00000021487	rab42a	100	98.872	ENSMZEG00005012460	rab42a	100	98.872	Maylandia_zebra
ENSNBRG00000021487	rab42a	82	93.578	ENSMMOG00000014358	rab42a	100	93.578	Mola_mola
ENSNBRG00000021487	rab42a	82	95.872	ENSORLG00000022335	rab42a	100	95.872	Oryzias_latipes
ENSNBRG00000021487	rab42a	82	95.872	ENSORLG00020013895	rab42a	100	95.872	Oryzias_latipes_hni
ENSNBRG00000021487	rab42a	82	95.872	ENSORLG00015004273	rab42a	100	95.872	Oryzias_latipes_hsok
ENSNBRG00000021487	rab42a	82	95.872	ENSOMEG00000020418	rab42a	100	95.872	Oryzias_melastigma
ENSNBRG00000021487	rab42a	81	47.465	ENSPKIG00000015234	-	93	50.000	Paramormyrops_kingsleyae
ENSNBRG00000021487	rab42a	82	77.523	ENSPKIG00000021215	-	100	77.523	Paramormyrops_kingsleyae
ENSNBRG00000021487	rab42a	74	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSNBRG00000021487	rab42a	95	84.766	ENSPFOG00000004838	rab42a	96	84.766	Poecilia_formosa
ENSNBRG00000021487	rab42a	82	94.037	ENSPLAG00000005628	rab42a	100	94.037	Poecilia_latipinna
ENSNBRG00000021487	rab42a	82	93.578	ENSPMEG00000019497	rab42a	100	93.578	Poecilia_mexicana
ENSNBRG00000021487	rab42a	82	94.495	ENSPREG00000013962	rab42a	100	94.495	Poecilia_reticulata
ENSNBRG00000021487	rab42a	100	98.872	ENSPNYG00000010325	rab42a	100	98.872	Pundamilia_nyererei
ENSNBRG00000021487	rab42a	82	91.284	ENSPNAG00000016567	rab42a	100	91.284	Pygocentrus_nattereri
ENSNBRG00000021487	rab42a	82	85.780	ENSSFOG00015020732	rab42a	100	85.780	Scleropages_formosus
ENSNBRG00000021487	rab42a	82	46.119	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSNBRG00000021487	rab42a	82	94.037	ENSSMAG00000020311	rab42a	100	94.037	Scophthalmus_maximus
ENSNBRG00000021487	rab42a	82	96.789	ENSSDUG00000011851	rab42a	100	96.789	Seriola_dumerili
ENSNBRG00000021487	rab42a	82	96.789	ENSSLDG00000020354	rab42a	100	96.789	Seriola_lalandi_dorsalis
ENSNBRG00000021487	rab42a	82	98.165	ENSSPAG00000016167	rab42a	100	98.165	Stegastes_partitus
ENSNBRG00000021487	rab42a	82	96.330	ENSTRUG00000010224	rab42a	100	96.330	Takifugu_rubripes
ENSNBRG00000021487	rab42a	82	94.954	ENSXCOG00000003428	rab42a	100	94.954	Xiphophorus_couchianus
ENSNBRG00000021487	rab42a	82	94.954	ENSXMAG00000028376	rab42a	100	94.954	Xiphophorus_maculatus