EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000021510 (Gene tree)
Gene ID: 102775767
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA wybutosine-synthesizing protein 2 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3205 bases
Position: chrJH422275.1:599157-602361
Accession: 102775767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000028234	MTS	PF05175.14	4.6e-06	1	1
ENSNBRP00000028234	Met_10	PF02475.16	6.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000028976	-	1188	XM_006781210	ENSNBRP00000028234	395 (aa)	XP_006781273	-

Gene Model

Click here to download ENSNBRG00000021510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021510	trmt12	96	50.365	ENSG00000183665	TRMT12	92	50.365	Homo_sapiens
ENSNBRG00000021510	trmt12	100	77.612	ENSAPOG00000011979	trmt12	100	77.612	Acanthochromis_polyacanthus
ENSNBRG00000021510	trmt12	96	50.240	ENSAMEG00000019612	TRMT12	92	50.240	Ailuropoda_melanoleuca
ENSNBRG00000021510	trmt12	96	82.552	ENSACIG00000012982	trmt12	100	82.552	Amphilophus_citrinellus
ENSNBRG00000021510	trmt12	100	80.506	ENSAOCG00000020570	trmt12	100	80.506	Amphiprion_ocellaris
ENSNBRG00000021510	trmt12	100	80.506	ENSAPEG00000006335	trmt12	100	80.506	Amphiprion_percula
ENSNBRG00000021510	trmt12	100	75.616	ENSATEG00000018316	trmt12	100	75.616	Anabas_testudineus
ENSNBRG00000021510	trmt12	100	94.776	ENSACLG00000001008	trmt12	100	94.776	Astatotilapia_calliptera
ENSNBRG00000021510	trmt12	99	57.957	ENSAMXG00000040366	trmt12	99	57.957	Astyanax_mexicanus
ENSNBRG00000021510	trmt12	96	50.000	ENSBTAG00000020398	TRMT12	89	50.000	Bos_taurus
ENSNBRG00000021510	trmt12	63	36.364	WBGene00009586	F40F9.10	54	36.364	Caenorhabditis_elegans
ENSNBRG00000021510	trmt12	97	47.700	ENSCJAG00000022174	TRMT12	92	47.700	Callithrix_jacchus
ENSNBRG00000021510	trmt12	96	50.608	ENSCAFG00000001040	TRMT12	93	50.608	Canis_familiaris
ENSNBRG00000021510	trmt12	96	50.608	ENSCAFG00020006500	TRMT12	93	50.608	Canis_lupus_dingo
ENSNBRG00000021510	trmt12	95	50.123	ENSCHIG00000016574	TRMT12	93	50.123	Capra_hircus
ENSNBRG00000021510	trmt12	96	50.245	ENSCPOG00000026520	TRMT12	92	50.245	Cavia_porcellus
ENSNBRG00000021510	trmt12	96	50.122	ENSCSAG00000018615	TRMT12	92	50.122	Chlorocebus_sabaeus
ENSNBRG00000021510	trmt12	96	50.948	ENSCPBG00000014290	TRMT12	92	50.948	Chrysemys_picta_bellii
ENSNBRG00000021510	trmt12	72	47.766	ENSCING00000019633	-	97	47.766	Ciona_intestinalis
ENSNBRG00000021510	trmt12	73	50.000	ENSCSAVG00000000415	-	92	50.000	Ciona_savignyi
ENSNBRG00000021510	trmt12	95	48.985	ENSCGRG00001014834	Trmt12	93	48.985	Cricetulus_griseus_chok1gshd
ENSNBRG00000021510	trmt12	99	67.726	ENSCSEG00000002675	trmt12	95	67.726	Cynoglossus_semilaevis
ENSNBRG00000021510	trmt12	100	70.823	ENSCVAG00000005590	trmt12	100	70.823	Cyprinodon_variegatus
ENSNBRG00000021510	trmt12	99	58.881	ENSDARG00000060338	trmt12	99	59.220	Danio_rerio
ENSNBRG00000021510	trmt12	95	48.529	ENSETEG00000009373	TRMT12	91	48.529	Echinops_telfairi
ENSNBRG00000021510	trmt12	96	50.608	ENSEASG00005022441	TRMT12	93	50.608	Equus_asinus_asinus
ENSNBRG00000021510	trmt12	96	49.268	ENSEEUG00000004844	TRMT12	92	49.268	Erinaceus_europaeus
ENSNBRG00000021510	trmt12	99	65.111	ENSELUG00000004240	trmt12	99	66.488	Esox_lucius
ENSNBRG00000021510	trmt12	65	60.000	ENSFALG00000003825	TRMT12	93	67.317	Ficedula_albicollis
ENSNBRG00000021510	trmt12	96	49.878	ENSFDAG00000016647	TRMT12	93	49.878	Fukomys_damarensis
ENSNBRG00000021510	trmt12	94	64.706	ENSFHEG00000017338	trmt12	96	64.706	Fundulus_heteroclitus
ENSNBRG00000021510	trmt12	86	54.795	ENSGALG00000006773	TRMT12	79	54.795	Gallus_gallus
ENSNBRG00000021510	trmt12	100	73.383	ENSGAFG00000020056	trmt12	100	73.383	Gambusia_affinis
ENSNBRG00000021510	trmt12	96	73.698	ENSGACG00000017351	trmt12	99	73.698	Gasterosteus_aculeatus
ENSNBRG00000021510	trmt12	96	52.029	ENSGAGG00000006032	TRMT12	94	52.029	Gopherus_agassizii
ENSNBRG00000021510	trmt12	100	94.527	ENSHBUG00000016412	trmt12	100	94.527	Haplochromis_burtoni
ENSNBRG00000021510	trmt12	96	48.786	ENSHGLG00000020498	TRMT12	93	48.786	Heterocephalus_glaber_female
ENSNBRG00000021510	trmt12	96	49.029	ENSHGLG00100020132	TRMT12	93	49.029	Heterocephalus_glaber_male
ENSNBRG00000021510	trmt12	100	69.750	ENSHCOG00000005050	trmt12	100	69.750	Hippocampus_comes
ENSNBRG00000021510	trmt12	99	55.961	ENSIPUG00000018011	trmt12	92	55.961	Ictalurus_punctatus
ENSNBRG00000021510	trmt12	95	49.153	ENSSTOG00000030617	TRMT12	92	49.153	Ictidomys_tridecemlineatus
ENSNBRG00000021510	trmt12	99	75.628	ENSKMAG00000000891	trmt12	99	75.628	Kryptolebias_marmoratus
ENSNBRG00000021510	trmt12	100	68.966	ENSLBEG00000028712	trmt12	100	68.966	Labrus_bergylta
ENSNBRG00000021510	trmt12	54	75.229	ENSLBEG00000017456	-	89	75.229	Labrus_bergylta
ENSNBRG00000021510	trmt12	97	51.074	ENSLACG00000015869	TRMT12	93	51.074	Latimeria_chalumnae
ENSNBRG00000021510	trmt12	99	56.650	ENSLOCG00000015290	trmt12	99	56.650	Lepisosteus_oculatus
ENSNBRG00000021510	trmt12	97	51.090	ENSLAFG00000012519	TRMT12	94	51.090	Loxodonta_africana
ENSNBRG00000021510	trmt12	96	49.635	ENSMMUG00000015490	TRMT12	92	49.635	Macaca_mulatta
ENSNBRG00000021510	trmt12	99	73.697	ENSMAMG00000020311	trmt12	99	73.697	Mastacembelus_armatus
ENSNBRG00000021510	trmt12	100	94.030	ENSMZEG00005007349	trmt12	100	94.030	Maylandia_zebra
ENSNBRG00000021510	trmt12	96	51.970	ENSMGAG00000004174	TRMT12	92	51.970	Meleagris_gallopavo
ENSNBRG00000021510	trmt12	99	72.864	ENSMMOG00000000412	trmt12	99	72.864	Mola_mola
ENSNBRG00000021510	trmt12	96	50.000	ENSMODG00000021403	-	91	50.000	Monodelphis_domestica
ENSNBRG00000021510	trmt12	98	49.877	ENSMODG00000011798	-	85	49.877	Monodelphis_domestica
ENSNBRG00000021510	trmt12	100	74.138	ENSMALG00000008668	trmt12	100	74.138	Monopterus_albus
ENSNBRG00000021510	trmt12	95	50.369	MGP_CAROLIEiJ_G0019820	Trmt12	91	50.369	Mus_caroli
ENSNBRG00000021510	trmt12	95	50.860	ENSMUSG00000037085	Trmt12	91	50.860	Mus_musculus
ENSNBRG00000021510	trmt12	95	51.597	MGP_PahariEiJ_G0019829	Trmt12	91	51.597	Mus_pahari
ENSNBRG00000021510	trmt12	95	50.369	MGP_SPRETEiJ_G0020717	Trmt12	91	50.369	Mus_spretus
ENSNBRG00000021510	trmt12	96	50.728	ENSMPUG00000019150	TRMT12	92	50.728	Mustela_putorius_furo
ENSNBRG00000021510	trmt12	97	49.395	ENSMLUG00000003753	TRMT12	94	49.395	Myotis_lucifugus
ENSNBRG00000021510	trmt12	96	48.905	ENSNGAG00000014548	Trmt12	94	48.905	Nannospalax_galili
ENSNBRG00000021510	trmt12	96	46.359	ENSOPRG00000008067	TRMT12	92	46.359	Ochotona_princeps
ENSNBRG00000021510	trmt12	96	50.608	ENSODEG00000018933	TRMT12	93	50.608	Octodon_degus
ENSNBRG00000021510	trmt12	100	93.532	ENSONIG00000002614	trmt12	100	93.532	Oreochromis_niloticus
ENSNBRG00000021510	trmt12	96	46.667	ENSOANG00000009987	TRMT12	94	46.667	Ornithorhynchus_anatinus
ENSNBRG00000021510	trmt12	96	46.117	ENSOCUG00000026379	TRMT12	92	46.117	Oryctolagus_cuniculus
ENSNBRG00000021510	trmt12	100	71.859	ENSORLG00000001280	trmt12	100	71.859	Oryzias_latipes
ENSNBRG00000021510	trmt12	100	71.859	ENSORLG00020000708	trmt12	100	71.859	Oryzias_latipes_hni
ENSNBRG00000021510	trmt12	100	71.106	ENSORLG00015012344	trmt12	100	71.106	Oryzias_latipes_hsok
ENSNBRG00000021510	trmt12	100	70.352	ENSOMEG00000015267	trmt12	98	70.352	Oryzias_melastigma
ENSNBRG00000021510	trmt12	96	49.392	ENSOGAG00000015845	TRMT12	93	49.392	Otolemur_garnettii
ENSNBRG00000021510	trmt12	99	60.988	ENSPKIG00000004640	trmt12	99	61.282	Paramormyrops_kingsleyae
ENSNBRG00000021510	trmt12	59	59.480	ENSPSIG00000003476	TRMT12	99	59.480	Pelodiscus_sinensis
ENSNBRG00000021510	trmt12	99	63.433	ENSPMGG00000016356	trmt12	97	63.433	Periophthalmus_magnuspinnatus
ENSNBRG00000021510	trmt12	91	52.646	ENSPCIG00000002967	TRMT12	80	52.646	Phascolarctos_cinereus
ENSNBRG00000021510	trmt12	96	74.278	ENSPFOG00000016931	trmt12	94	74.278	Poecilia_formosa
ENSNBRG00000021510	trmt12	100	73.566	ENSPLAG00000020621	trmt12	100	73.566	Poecilia_latipinna
ENSNBRG00000021510	trmt12	100	75.062	ENSPMEG00000000818	trmt12	100	75.062	Poecilia_mexicana
ENSNBRG00000021510	trmt12	100	74.185	ENSPREG00000011621	trmt12	100	74.687	Poecilia_reticulata
ENSNBRG00000021510	trmt12	96	50.122	ENSPPYG00000018866	TRMT12	92	50.122	Pongo_abelii
ENSNBRG00000021510	trmt12	95	50.245	ENSPCAG00000000556	TRMT12	91	50.245	Procavia_capensis
ENSNBRG00000021510	trmt12	96	49.878	ENSPVAG00000009149	TRMT12	92	49.878	Pteropus_vampyrus
ENSNBRG00000021510	trmt12	96	94.271	ENSPNYG00000010696	trmt12	100	94.271	Pundamilia_nyererei
ENSNBRG00000021510	trmt12	99	55.952	ENSPNAG00000019028	trmt12	99	55.952	Pygocentrus_nattereri
ENSNBRG00000021510	trmt12	95	51.351	ENSRNOG00000008978	Trmt12	93	51.351	Rattus_norvegicus
ENSNBRG00000021510	trmt12	96	49.749	ENSSHAG00000003345	TRMT12	91	49.749	Sarcophilus_harrisii
ENSNBRG00000021510	trmt12	99	56.595	ENSSFOG00015006090	trmt12	99	56.595	Scleropages_formosus
ENSNBRG00000021510	trmt12	99	75.561	ENSSMAG00000013247	trmt12	99	75.561	Scophthalmus_maximus
ENSNBRG00000021510	trmt12	100	77.171	ENSSDUG00000006168	trmt12	100	77.171	Seriola_dumerili
ENSNBRG00000021510	trmt12	100	76.355	ENSSLDG00000025007	trmt12	100	76.355	Seriola_lalandi_dorsalis
ENSNBRG00000021510	trmt12	96	52.029	ENSSPUG00000005321	TRMT12	92	52.029	Sphenodon_punctatus
ENSNBRG00000021510	trmt12	100	79.104	ENSSPAG00000009435	trmt12	97	79.104	Stegastes_partitus
ENSNBRG00000021510	trmt12	74	57.508	ENSTGUG00000002280	TRMT12	99	50.000	Taeniopygia_guttata
ENSNBRG00000021510	trmt12	99	67.419	ENSTRUG00000011548	trmt12	99	67.419	Takifugu_rubripes
ENSNBRG00000021510	trmt12	99	65.099	ENSTNIG00000016866	trmt12	99	65.099	Tetraodon_nigroviridis
ENSNBRG00000021510	trmt12	96	50.608	ENSUAMG00000002067	TRMT12	94	50.608	Ursus_americanus
ENSNBRG00000021510	trmt12	96	50.852	ENSVPAG00000006519	TRMT12	92	50.852	Vicugna_pacos
ENSNBRG00000021510	trmt12	97	49.282	ENSVVUG00000016790	TRMT12	93	49.282	Vulpes_vulpes
ENSNBRG00000021510	trmt12	99	52.750	ENSXETG00000009641	trmt12	95	52.750	Xenopus_tropicalis
ENSNBRG00000021510	trmt12	100	73.515	ENSXCOG00000016505	trmt12	100	73.515	Xiphophorus_couchianus
ENSNBRG00000021510	trmt12	100	74.129	ENSXMAG00000025318	trmt12	100	74.129	Xiphophorus_maculatus