EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000021596 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: protein RRP5 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 15527 bases
Position: chrJH422291.1:3684384-3699910
Accession: 102793751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000028472	S1	PF00575.23	1.7e-53	1	4
ENSNBRP00000028472	S1	PF00575.23	1.7e-53	2	4
ENSNBRP00000028472	S1	PF00575.23	1.7e-53	3	4
ENSNBRP00000028472	S1	PF00575.23	1.7e-53	4	4
ENSNBRP00000028509	S1	PF00575.23	3.1e-47	1	3
ENSNBRP00000028509	S1	PF00575.23	3.1e-47	2	3
ENSNBRP00000028509	S1	PF00575.23	3.1e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000029216	-	4335	XM_006790863	ENSNBRP00000028472	1444 (aa)	XP_006790926	-
ENSNBRT00000029253	-	2259	-	ENSNBRP00000028509	752 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000021596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021596	pdcd11	99	54.494	ENSG00000148843	PDCD11	85	55.357	Homo_sapiens
ENSNBRG00000021596	pdcd11	97	77.874	ENSAPOG00000015629	pdcd11	85	83.810	Acanthochromis_polyacanthus
ENSNBRG00000021596	pdcd11	99	56.583	ENSAMEG00000017935	PDCD11	85	55.162	Ailuropoda_melanoleuca
ENSNBRG00000021596	pdcd11	93	79.947	ENSACIG00000006458	-	93	73.210	Amphilophus_citrinellus
ENSNBRG00000021596	pdcd11	97	77.011	ENSAOCG00000015287	pdcd11	85	81.905	Amphiprion_ocellaris
ENSNBRG00000021596	pdcd11	99	73.724	ENSAPEG00000020240	pdcd11	96	65.436	Amphiprion_percula
ENSNBRG00000021596	pdcd11	97	76.791	ENSATEG00000021043	pdcd11	85	81.703	Anabas_testudineus
ENSNBRG00000021596	pdcd11	97	52.909	ENSAPLG00000010301	PDCD11	82	56.013	Anas_platyrhynchos
ENSNBRG00000021596	pdcd11	97	54.203	ENSACAG00000004796	PDCD11	93	55.389	Anolis_carolinensis
ENSNBRG00000021596	pdcd11	99	53.867	ENSANAG00000034576	PDCD11	85	54.599	Aotus_nancymaae
ENSNBRG00000021596	pdcd11	94	89.837	ENSACLG00000018236	pdcd11	92	85.414	Astatotilapia_calliptera
ENSNBRG00000021596	pdcd11	87	61.238	ENSAMXG00000005458	pdcd11	87	59.935	Astyanax_mexicanus
ENSNBRG00000021596	pdcd11	99	55.182	ENSBTAG00000009715	PDCD11	85	55.325	Bos_taurus
ENSNBRG00000021596	pdcd11	99	53.740	ENSCJAG00000018257	PDCD11	85	55.357	Callithrix_jacchus
ENSNBRG00000021596	pdcd11	99	55.125	ENSCAFG00000010411	PDCD11	85	56.380	Canis_familiaris
ENSNBRG00000021596	pdcd11	99	55.650	ENSCAFG00020010369	PDCD11	86	57.143	Canis_lupus_dingo
ENSNBRG00000021596	pdcd11	99	54.902	ENSCHIG00000025218	PDCD11	84	55.357	Capra_hircus
ENSNBRG00000021596	pdcd11	95	53.541	ENSTSYG00000033423	PDCD11	85	56.774	Carlito_syrichta
ENSNBRG00000021596	pdcd11	91	54.674	ENSCAPG00000005386	PDCD11	85	58.252	Cavia_aperea
ENSNBRG00000021596	pdcd11	96	54.674	ENSCPOG00000010957	PDCD11	91	57.372	Cavia_porcellus
ENSNBRG00000021596	pdcd11	99	53.740	ENSCCAG00000018950	PDCD11	85	55.357	Cebus_capucinus
ENSNBRG00000021596	pdcd11	99	54.213	ENSCATG00000044331	PDCD11	85	55.655	Cercocebus_atys
ENSNBRG00000021596	pdcd11	99	55.523	ENSCLAG00000001029	PDCD11	86	56.325	Chinchilla_lanigera
ENSNBRG00000021596	pdcd11	99	54.213	ENSCSAG00000005346	PDCD11	85	55.655	Chlorocebus_sabaeus
ENSNBRG00000021596	pdcd11	61	68.992	ENSCHOG00000004796	PDCD11	63	68.992	Choloepus_hoffmanni
ENSNBRG00000021596	pdcd11	97	41.549	ENSCPBG00000024487	PDCD11	95	40.704	Chrysemys_picta_bellii
ENSNBRG00000021596	pdcd11	89	30.340	ENSCING00000002715	-	52	44.059	Ciona_intestinalis
ENSNBRG00000021596	pdcd11	99	54.213	ENSCANG00000043300	PDCD11	85	55.988	Colobus_angolensis_palliatus
ENSNBRG00000021596	pdcd11	97	54.469	ENSCGRG00001006458	Pdcd11	84	56.380	Cricetulus_griseus_chok1gshd
ENSNBRG00000021596	pdcd11	97	54.190	ENSCGRG00000003583	Pdcd11	84	56.083	Cricetulus_griseus_crigri
ENSNBRG00000021596	pdcd11	95	78.964	ENSCSEG00000010739	pdcd11	87	76.923	Cynoglossus_semilaevis
ENSNBRG00000021596	pdcd11	92	77.215	ENSCVAG00000018903	pdcd11	81	82.807	Cyprinodon_variegatus
ENSNBRG00000021596	pdcd11	96	59.238	ENSDARG00000052480	pdcd11	83	62.102	Danio_rerio
ENSNBRG00000021596	pdcd11	99	53.699	ENSDNOG00000013838	PDCD11	83	59.396	Dasypus_novemcinctus
ENSNBRG00000021596	pdcd11	98	54.545	ENSDORG00000010420	Pdcd11	92	55.917	Dipodomys_ordii
ENSNBRG00000021596	pdcd11	84	57.500	ENSETEG00000000813	PDCD11	79	57.643	Echinops_telfairi
ENSNBRG00000021596	pdcd11	88	34.190	ENSEBUG00000002358	-	83	55.607	Eptatretus_burgeri
ENSNBRG00000021596	pdcd11	96	55.587	ENSEASG00005015159	PDCD11	85	56.509	Equus_asinus_asinus
ENSNBRG00000021596	pdcd11	99	55.153	ENSECAG00000020507	PDCD11	85	55.162	Equus_caballus
ENSNBRG00000021596	pdcd11	88	54.930	ENSEEUG00000009245	PDCD11	76	56.587	Erinaceus_europaeus
ENSNBRG00000021596	pdcd11	95	70.219	ENSELUG00000004211	pdcd11	84	73.567	Esox_lucius
ENSNBRG00000021596	pdcd11	99	55.866	ENSFCAG00000002384	PDCD11	85	56.677	Felis_catus
ENSNBRG00000021596	pdcd11	98	51.117	ENSFALG00000008775	PDCD11	85	55.325	Ficedula_albicollis
ENSNBRG00000021596	pdcd11	99	55.241	ENSFDAG00000009532	PDCD11	85	54.985	Fukomys_damarensis
ENSNBRG00000021596	pdcd11	97	75.072	ENSFHEG00000022997	pdcd11	83	90.367	Fundulus_heteroclitus
ENSNBRG00000021596	pdcd11	96	58.246	ENSGMOG00000004186	pdcd11	79	69.716	Gadus_morhua
ENSNBRG00000021596	pdcd11	96	41.656	ENSGALG00000008265	PDCD11	85	36.146	Gallus_gallus
ENSNBRG00000021596	pdcd11	95	75.953	ENSGAFG00000012806	pdcd11	81	81.818	Gambusia_affinis
ENSNBRG00000021596	pdcd11	97	75.989	ENSGACG00000018233	pdcd11	84	81.646	Gasterosteus_aculeatus
ENSNBRG00000021596	pdcd11	96	52.809	ENSGAGG00000024314	PDCD11	87	53.274	Gopherus_agassizii
ENSNBRG00000021596	pdcd11	99	54.571	ENSGGOG00000011621	PDCD11	85	55.952	Gorilla_gorilla
ENSNBRG00000021596	pdcd11	99	89.415	ENSHBUG00000020226	pdcd11	85	95.847	Haplochromis_burtoni
ENSNBRG00000021596	pdcd11	98	52.661	ENSHGLG00000001462	PDCD11	84	56.869	Heterocephalus_glaber_female
ENSNBRG00000021596	pdcd11	98	49.580	ENSHGLG00100018779	PDCD11	83	53.355	Heterocephalus_glaber_male
ENSNBRG00000021596	pdcd11	94	72.254	ENSHCOG00000016006	pdcd11	85	77.814	Hippocampus_comes
ENSNBRG00000021596	pdcd11	98	52.207	ENSIPUG00000015102	pdcd11	94	48.216	Ictalurus_punctatus
ENSNBRG00000021596	pdcd11	97	55.211	ENSSTOG00000014553	PDCD11	86	57.704	Ictidomys_tridecemlineatus
ENSNBRG00000021596	pdcd11	97	52.877	ENSJJAG00000015523	Pdcd11	85	55.490	Jaculus_jaculus
ENSNBRG00000021596	pdcd11	95	70.118	ENSKMAG00000021182	pdcd11	84	70.118	Kryptolebias_marmoratus
ENSNBRG00000021596	pdcd11	99	67.089	ENSLBEG00000009990	-	99	62.601	Labrus_bergylta
ENSNBRG00000021596	pdcd11	96	57.971	ENSLOCG00000011818	pdcd11	92	58.160	Lepisosteus_oculatus
ENSNBRG00000021596	pdcd11	99	52.368	ENSLAFG00000008398	PDCD11	86	53.116	Loxodonta_africana
ENSNBRG00000021596	pdcd11	99	54.213	ENSMFAG00000044058	PDCD11	85	55.655	Macaca_fascicularis
ENSNBRG00000021596	pdcd11	99	54.213	ENSMMUG00000007058	PDCD11	85	55.655	Macaca_mulatta
ENSNBRG00000021596	pdcd11	99	53.933	ENSMNEG00000040726	PDCD11	85	54.925	Macaca_nemestrina
ENSNBRG00000021596	pdcd11	97	57.233	ENSMLEG00000040978	PDCD11	85	58.497	Mandrillus_leucophaeus
ENSNBRG00000021596	pdcd11	97	75.000	ENSMAMG00000009572	pdcd11	85	80.952	Mastacembelus_armatus
ENSNBRG00000021596	pdcd11	99	89.415	ENSMZEG00005008949	pdcd11	85	96.166	Maylandia_zebra
ENSNBRG00000021596	pdcd11	95	51.923	ENSMGAG00000010482	PDCD11	83	57.143	Meleagris_gallopavo
ENSNBRG00000021596	pdcd11	92	43.129	ENSMAUG00000014924	Pdcd11	75	56.083	Mesocricetus_auratus
ENSNBRG00000021596	pdcd11	99	54.775	ENSMICG00000012421	PDCD11	85	55.821	Microcebus_murinus
ENSNBRG00000021596	pdcd11	99	52.632	ENSMOCG00000021792	Pdcd11	85	56.495	Microtus_ochrogaster
ENSNBRG00000021596	pdcd11	96	67.391	ENSMMOG00000007572	pdcd11	85	71.856	Mola_mola
ENSNBRG00000021596	pdcd11	89	53.297	ENSMODG00000011077	PDCD11	76	55.689	Monodelphis_domestica
ENSNBRG00000021596	pdcd11	93	72.984	ENSMALG00000003859	pdcd11	86	76.140	Monopterus_albus
ENSNBRG00000021596	pdcd11	99	55.899	MGP_CAROLIEiJ_G0023050	Pdcd11	86	57.567	Mus_caroli
ENSNBRG00000021596	pdcd11	99	55.587	ENSMUSG00000025047	Pdcd11	85	57.396	Mus_musculus
ENSNBRG00000021596	pdcd11	99	54.494	MGP_PahariEiJ_G0014540	Pdcd11	85	56.418	Mus_pahari
ENSNBRG00000021596	pdcd11	98	55.493	MGP_SPRETEiJ_G0023971	Pdcd11	85	57.313	Mus_spretus
ENSNBRG00000021596	pdcd11	99	55.307	ENSMPUG00000016829	PDCD11	85	55.917	Mustela_putorius_furo
ENSNBRG00000021596	pdcd11	99	54.875	ENSMLUG00000004997	PDCD11	85	56.213	Myotis_lucifugus
ENSNBRG00000021596	pdcd11	96	54.648	ENSNGAG00000018143	Pdcd11	85	56.287	Nannospalax_galili
ENSNBRG00000021596	pdcd11	99	53.652	ENSNLEG00000026700	PDCD11	85	55.060	Nomascus_leucogenys
ENSNBRG00000021596	pdcd11	89	53.955	ENSOPRG00000010593	PDCD11	82	55.689	Ochotona_princeps
ENSNBRG00000021596	pdcd11	99	53.977	ENSODEG00000008079	PDCD11	85	56.325	Octodon_degus
ENSNBRG00000021596	pdcd11	99	88.169	ENSONIG00000018835	pdcd11	85	94.249	Oreochromis_niloticus
ENSNBRG00000021596	pdcd11	98	53.221	ENSOANG00000001636	-	86	55.522	Ornithorhynchus_anatinus
ENSNBRG00000021596	pdcd11	98	53.631	ENSOCUG00000006312	PDCD11	84	55.090	Oryctolagus_cuniculus
ENSNBRG00000021596	pdcd11	93	72.252	ENSORLG00000012995	pdcd11	83	72.252	Oryzias_latipes
ENSNBRG00000021596	pdcd11	97	74.063	ENSORLG00020003642	pdcd11	85	78.413	Oryzias_latipes_hni
ENSNBRG00000021596	pdcd11	97	74.352	ENSORLG00015001618	pdcd11	85	78.730	Oryzias_latipes_hsok
ENSNBRG00000021596	pdcd11	59	75.145	ENSOMEG00000010904	pdcd11	79	75.668	Oryzias_melastigma
ENSNBRG00000021596	pdcd11	77	74.320	ENSOMEG00000010947	-	91	74.320	Oryzias_melastigma
ENSNBRG00000021596	pdcd11	99	54.648	ENSOGAG00000008683	PDCD11	85	57.485	Otolemur_garnettii
ENSNBRG00000021596	pdcd11	99	54.622	ENSOARG00000003719	PDCD11	84	54.896	Ovis_aries
ENSNBRG00000021596	pdcd11	99	54.494	ENSPPAG00000024593	PDCD11	85	55.357	Pan_paniscus
ENSNBRG00000021596	pdcd11	99	55.866	ENSPPRG00000015133	PDCD11	85	56.677	Panthera_pardus
ENSNBRG00000021596	pdcd11	99	55.587	ENSPTIG00000011433	PDCD11	85	56.716	Panthera_tigris_altaica
ENSNBRG00000021596	pdcd11	99	54.494	ENSPTRG00000002911	PDCD11	85	55.357	Pan_troglodytes
ENSNBRG00000021596	pdcd11	99	54.294	ENSPANG00000020959	PDCD11	85	55.655	Papio_anubis
ENSNBRG00000021596	pdcd11	97	60.234	ENSPKIG00000000973	pdcd11	85	63.578	Paramormyrops_kingsleyae
ENSNBRG00000021596	pdcd11	89	45.267	ENSPSIG00000005102	PDCD11	82	37.712	Pelodiscus_sinensis
ENSNBRG00000021596	pdcd11	93	64.382	ENSPMGG00000007289	pdcd11	91	86.697	Periophthalmus_magnuspinnatus
ENSNBRG00000021596	pdcd11	99	53.371	ENSPEMG00000010315	Pdcd11	85	56.548	Peromyscus_maniculatus_bairdii
ENSNBRG00000021596	pdcd11	94	46.724	ENSPMAG00000003098	pdcd11	81	52.532	Petromyzon_marinus
ENSNBRG00000021596	pdcd11	98	52.676	ENSPCIG00000001118	PDCD11	82	57.605	Phascolarctos_cinereus
ENSNBRG00000021596	pdcd11	95	76.590	ENSPFOG00000006012	pdcd11	85	80.892	Poecilia_formosa
ENSNBRG00000021596	pdcd11	98	75.645	ENSPLAG00000014494	pdcd11	85	80.757	Poecilia_latipinna
ENSNBRG00000021596	pdcd11	94	76.991	ENSPMEG00000018177	pdcd11	86	80.707	Poecilia_mexicana
ENSNBRG00000021596	pdcd11	95	76.012	ENSPREG00000000475	pdcd11	85	80.255	Poecilia_reticulata
ENSNBRG00000021596	pdcd11	99	53.652	ENSPPYG00000002621	PDCD11	84	55.060	Pongo_abelii
ENSNBRG00000021596	pdcd11	81	56.740	ENSPCOG00000023327	PDCD11	70	61.268	Propithecus_coquereli
ENSNBRG00000021596	pdcd11	93	54.318	ENSPVAG00000004176	PDCD11	79	55.030	Pteropus_vampyrus
ENSNBRG00000021596	pdcd11	99	89.539	ENSPNYG00000003979	pdcd11	85	96.166	Pundamilia_nyererei
ENSNBRG00000021596	pdcd11	94	63.557	ENSPNAG00000017225	pdcd11	85	67.524	Pygocentrus_nattereri
ENSNBRG00000021596	pdcd11	99	55.775	ENSRNOG00000020304	Pdcd11	85	57.784	Rattus_norvegicus
ENSNBRG00000021596	pdcd11	99	54.017	ENSRBIG00000011889	PDCD11	85	55.689	Rhinopithecus_bieti
ENSNBRG00000021596	pdcd11	99	54.294	ENSRROG00000030483	PDCD11	85	55.988	Rhinopithecus_roxellana
ENSNBRG00000021596	pdcd11	94	34.503	YMR229C	-	73	43.234	Saccharomyces_cerevisiae
ENSNBRG00000021596	pdcd11	99	54.775	ENSSBOG00000030308	PDCD11	84	55.952	Saimiri_boliviensis_boliviensis
ENSNBRG00000021596	pdcd11	95	50.970	ENSSHAG00000018258	PDCD11	82	56.311	Sarcophilus_harrisii
ENSNBRG00000021596	pdcd11	97	61.389	ENSSFOG00015003881	pdcd11	91	67.097	Scleropages_formosus
ENSNBRG00000021596	pdcd11	97	74.011	ENSSMAG00000006612	pdcd11	85	81.962	Scophthalmus_maximus
ENSNBRG00000021596	pdcd11	91	78.107	ENSSDUG00000021302	pdcd11	82	83.226	Seriola_dumerili
ENSNBRG00000021596	pdcd11	99	72.431	ENSSLDG00000010228	pdcd11	87	73.434	Seriola_lalandi_dorsalis
ENSNBRG00000021596	pdcd11	95	48.810	ENSSARG00000002540	PDCD11	52	37.342	Sorex_araneus
ENSNBRG00000021596	pdcd11	95	84.127	ENSSPAG00000017558	pdcd11	88	83.810	Stegastes_partitus
ENSNBRG00000021596	pdcd11	98	55.337	ENSSSCG00000010599	PDCD11	86	56.805	Sus_scrofa
ENSNBRG00000021596	pdcd11	99	67.000	ENSTRUG00000014291	pdcd11	96	57.166	Takifugu_rubripes
ENSNBRG00000021596	pdcd11	97	74.212	ENSTNIG00000012085	pdcd11	84	79.430	Tetraodon_nigroviridis
ENSNBRG00000021596	pdcd11	87	56.604	ENSTBEG00000001893	PDCD11	76	57.843	Tupaia_belangeri
ENSNBRG00000021596	pdcd11	94	49.014	ENSTTRG00000003356	PDCD11	80	50.445	Tursiops_truncatus
ENSNBRG00000021596	pdcd11	99	56.022	ENSUAMG00000018015	PDCD11	85	57.227	Ursus_americanus
ENSNBRG00000021596	pdcd11	99	56.022	ENSUMAG00000023567	PDCD11	84	57.612	Ursus_maritimus
ENSNBRG00000021596	pdcd11	73	56.098	ENSVPAG00000007405	PDCD11	60	55.102	Vicugna_pacos
ENSNBRG00000021596	pdcd11	99	55.125	ENSVVUG00000004457	PDCD11	87	56.677	Vulpes_vulpes
ENSNBRG00000021596	pdcd11	98	53.886	ENSXETG00000009482	pdcd11	83	61.039	Xenopus_tropicalis
ENSNBRG00000021596	pdcd11	92	70.163	ENSXCOG00000012420	pdcd11	81	62.633	Xiphophorus_couchianus
ENSNBRG00000021596	pdcd11	95	76.369	ENSXMAG00000004638	pdcd11	85	81.789	Xiphophorus_maculatus