EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000021980 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5928 bases
Position: chrJH422333.1:1898612-1904539
Accession: 102798753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000028905	Nop52	PF05997.12	9.5e-51	1	1
ENSNBRP00000028888	Nop52	PF05997.12	6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000029643	-	1728	XM_006799172	ENSNBRP00000028888	575 (aa)	XP_006799235	-
ENSNBRT00000029660	-	1182	-	ENSNBRP00000028905	393 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000021980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000021980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000021980	-	94	80.087	ENSACIG00000019121	rrp1	84	75.424	Amphilophus_citrinellus
ENSNBRG00000021980	-	53	75.000	ENSAOCG00000017894	-	52	76.382	Amphiprion_ocellaris
ENSNBRG00000021980	-	58	50.435	ENSCSAG00000007936	RRP1	63	51.675	Chlorocebus_sabaeus
ENSNBRG00000021980	-	52	37.089	ENSCING00000003304	-	52	36.493	Ciona_intestinalis
ENSNBRG00000021980	-	59	49.787	ENSCANG00000042611	RRP1	50	51.174	Colobus_angolensis_palliatus
ENSNBRG00000021980	-	52	65.534	ENSCVAG00000017568	-	52	65.385	Cyprinodon_variegatus
ENSNBRG00000021980	-	62	57.895	ENSELUG00000015885	-	57	61.905	Esox_lucius
ENSNBRG00000021980	-	92	95.045	ENSHBUG00000003766	-	81	88.987	Haplochromis_burtoni
ENSNBRG00000021980	-	52	66.346	ENSLBEG00000021417	RRP1	51	66.346	Labrus_bergylta
ENSNBRG00000021980	-	60	54.251	ENSMMOG00000019175	rrp1	61	53.815	Mola_mola
ENSNBRG00000021980	-	57	69.955	ENSMALG00000010310	rrp1	59	68.261	Monopterus_albus
ENSNBRG00000021980	-	80	92.342	ENSONIG00000004264	rrp1	67	88.940	Oreochromis_niloticus
ENSNBRG00000021980	-	62	48.780	ENSOANG00000006472	-	53	54.545	Ornithorhynchus_anatinus
ENSNBRG00000021980	-	52	50.685	ENSPMGG00000007512	-	54	50.685	Periophthalmus_magnuspinnatus
ENSNBRG00000021980	-	72	40.000	ENSPEMG00000018421	Rrp1	70	39.550	Peromyscus_maniculatus_bairdii
ENSNBRG00000021980	-	53	51.429	ENSSHAG00000010304	-	62	53.960	Sarcophilus_harrisii
ENSNBRG00000021980	-	56	71.946	ENSSMAG00000016847	-	51	74.272	Scophthalmus_maximus
ENSNBRG00000021980	-	55	67.431	ENSTRUG00000017592	rrp1	56	70.098	Takifugu_rubripes