EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000022370 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 606 bases
Position: chrJH422317.1:3353483-3354088
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000029368	SM-ATX	PF14438.6	7.1e-08	1	1
ENSNBRP00000029368	LSM14	PF12701.7	3.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030125	-	318	-	ENSNBRP00000029368	105 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000022370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000022370	-	95	66.000	ENSNBRG00000022606	-	75	66.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022370	-	87	74.725	ENSAPOG00000009997	-	84	74.725	Acanthochromis_polyacanthus
ENSNBRG00000022370	-	94	85.859	ENSACIG00000003134	-	80	85.859	Amphilophus_citrinellus
ENSNBRG00000022370	-	89	77.419	ENSAPEG00000013779	-	92	77.419	Amphiprion_percula
ENSNBRG00000022370	-	76	85.000	ENSATEG00000015882	-	91	85.000	Anabas_testudineus
ENSNBRG00000022370	-	90	82.979	ENSCVAG00000012411	-	97	82.979	Cyprinodon_variegatus
ENSNBRG00000022370	-	87	65.934	ENSCVAG00000005570	-	94	65.934	Cyprinodon_variegatus
ENSNBRG00000022370	-	90	84.043	ENSGAFG00000013718	-	97	84.043	Gambusia_affinis
ENSNBRG00000022370	-	95	65.000	ENSHBUG00000011864	-	75	65.000	Haplochromis_burtoni
ENSNBRG00000022370	-	100	96.190	ENSHBUG00000012323	-	100	96.190	Haplochromis_burtoni
ENSNBRG00000022370	-	87	64.835	ENSHCOG00000004862	-	83	64.835	Hippocampus_comes
ENSNBRG00000022370	-	90	80.851	ENSKMAG00000012850	-	97	80.851	Kryptolebias_marmoratus
ENSNBRG00000022370	-	84	78.409	ENSKMAG00000016674	-	84	78.495	Kryptolebias_marmoratus
ENSNBRG00000022370	-	94	79.208	ENSLBEG00000007971	-	97	79.208	Labrus_bergylta
ENSNBRG00000022370	-	86	71.111	ENSLBEG00000016427	lsm14b	63	71.111	Labrus_bergylta
ENSNBRG00000022370	-	87	70.330	ENSNGAG00000016305	-	73	70.330	Nannospalax_galili
ENSNBRG00000022370	-	90	77.895	ENSORLG00020018184	-	97	77.895	Oryzias_latipes_hni
ENSNBRG00000022370	-	74	76.923	ENSOMEG00000007241	-	94	76.923	Oryzias_melastigma
ENSNBRG00000022370	-	87	72.527	ENSPKIG00000003275	lsm14b	84	72.527	Paramormyrops_kingsleyae
ENSNBRG00000022370	-	90	68.421	ENSPMGG00000014569	lsm14b	59	68.421	Periophthalmus_magnuspinnatus
ENSNBRG00000022370	-	73	74.026	ENSPMGG00000004595	-	78	74.026	Periophthalmus_magnuspinnatus
ENSNBRG00000022370	-	87	68.132	ENSPREG00000016484	-	59	68.132	Poecilia_reticulata
ENSNBRG00000022370	-	75	81.013	ENSPREG00000007817	-	91	81.013	Poecilia_reticulata
ENSNBRG00000022370	-	95	65.000	ENSPNYG00000019601	-	75	65.000	Pundamilia_nyererei
ENSNBRG00000022370	-	100	96.190	ENSPNYG00000021706	-	99	96.190	Pundamilia_nyererei
ENSNBRG00000022370	-	77	67.901	ENSSLDG00000011706	-	88	67.901	Seriola_lalandi_dorsalis
ENSNBRG00000022370	-	79	83.133	ENSSLDG00000012686	-	90	83.133	Seriola_lalandi_dorsalis
ENSNBRG00000022370	-	79	83.133	ENSSLDG00000011341	-	90	83.133	Seriola_lalandi_dorsalis
ENSNBRG00000022370	-	89	76.344	ENSSPAG00000018837	-	92	76.344	Stegastes_partitus
ENSNBRG00000022370	-	87	68.132	ENSXCOG00000017365	-	92	68.132	Xiphophorus_couchianus
ENSNBRG00000022370	-	80	82.143	ENSXCOG00000011423	-	92	82.143	Xiphophorus_couchianus
ENSNBRG00000022370	-	80	82.143	ENSXMAG00000015481	-	92	82.143	Xiphophorus_maculatus