EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000022402 (Gene tree)
Gene ID: 102793065
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specificity factor subunit 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 8860 bases
Position: chrJH422297.1:3524428-3533287
Accession: 102793065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000029426	Beta-Casp	PF10996.8	5.3e-21	1	1
ENSNBRP00000029426	Lactamase_B	PF00753.27	2.3e-06	1	1
ENSNBRP00000029426	RMMBL	PF07521.12	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030183	-	2843	XM_006792607	ENSNBRP00000029426	787 (aa)	XP_006792670	UPI0003EBBE68

Gene Model

Click here to download ENSNBRG00000022402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022402	cpsf2	100	85.678	ENSG00000165934	CPSF2	100	85.678	Homo_sapiens
ENSNBRG00000022402	cpsf2	100	95.934	ENSAPOG00000001242	cpsf2	100	95.934	Acanthochromis_polyacanthus
ENSNBRG00000022402	cpsf2	100	96.827	ENSACIG00000009331	cpsf2	100	96.827	Amphilophus_citrinellus
ENSNBRG00000022402	cpsf2	100	96.188	ENSAOCG00000014095	cpsf2	100	96.188	Amphiprion_ocellaris
ENSNBRG00000022402	cpsf2	100	96.188	ENSAPEG00000009158	cpsf2	100	96.188	Amphiprion_percula
ENSNBRG00000022402	cpsf2	96	94.063	ENSATEG00000017644	cpsf2	99	93.792	Anabas_testudineus
ENSNBRG00000022402	cpsf2	100	85.588	ENSAPLG00000006330	CPSF2	100	85.588	Anas_platyrhynchos
ENSNBRG00000022402	cpsf2	100	85.171	ENSACAG00000009245	CPSF2	100	85.171	Anolis_carolinensis
ENSNBRG00000022402	cpsf2	100	85.805	ENSANAG00000022915	CPSF2	100	85.805	Aotus_nancymaae
ENSNBRG00000022402	cpsf2	100	89.607	ENSAMXG00000018696	cpsf2	100	89.607	Astyanax_mexicanus
ENSNBRG00000022402	cpsf2	100	85.805	ENSBTAG00000010227	CPSF2	100	85.805	Bos_taurus
ENSNBRG00000022402	cpsf2	100	41.647	WBGene00017313	cpsf-2	100	41.784	Caenorhabditis_elegans
ENSNBRG00000022402	cpsf2	100	85.805	ENSCJAG00000018069	CPSF2	100	85.805	Callithrix_jacchus
ENSNBRG00000022402	cpsf2	100	85.678	ENSCAFG00000010909	CPSF2	100	85.678	Canis_familiaris
ENSNBRG00000022402	cpsf2	100	85.678	ENSCAFG00020020670	CPSF2	100	85.678	Canis_lupus_dingo
ENSNBRG00000022402	cpsf2	100	85.805	ENSCHIG00000023848	CPSF2	100	85.805	Capra_hircus
ENSNBRG00000022402	cpsf2	100	85.678	ENSTSYG00000009036	CPSF2	100	85.678	Carlito_syrichta
ENSNBRG00000022402	cpsf2	100	85.805	ENSCPOG00000010899	CPSF2	100	85.805	Cavia_porcellus
ENSNBRG00000022402	cpsf2	100	85.805	ENSCCAG00000028088	CPSF2	100	85.805	Cebus_capucinus
ENSNBRG00000022402	cpsf2	100	85.805	ENSCATG00000030132	CPSF2	100	85.805	Cercocebus_atys
ENSNBRG00000022402	cpsf2	100	85.805	ENSCLAG00000012404	CPSF2	100	85.805	Chinchilla_lanigera
ENSNBRG00000022402	cpsf2	100	85.805	ENSCSAG00000011300	CPSF2	100	85.805	Chlorocebus_sabaeus
ENSNBRG00000022402	cpsf2	100	79.975	ENSCHOG00000012904	CPSF2	100	79.975	Choloepus_hoffmanni
ENSNBRG00000022402	cpsf2	100	85.443	ENSCPBG00000008766	CPSF2	97	85.443	Chrysemys_picta_bellii
ENSNBRG00000022402	cpsf2	100	53.071	ENSCING00000007881	-	100	52.580	Ciona_intestinalis
ENSNBRG00000022402	cpsf2	94	86.216	ENSCANG00000041651	CPSF2	100	86.198	Colobus_angolensis_palliatus
ENSNBRG00000022402	cpsf2	100	85.298	ENSCGRG00001006901	Cpsf2	100	85.298	Cricetulus_griseus_chok1gshd
ENSNBRG00000022402	cpsf2	100	85.298	ENSCGRG00000012416	Cpsf2	100	85.298	Cricetulus_griseus_crigri
ENSNBRG00000022402	cpsf2	100	92.893	ENSCSEG00000004116	cpsf2	100	92.893	Cynoglossus_semilaevis
ENSNBRG00000022402	cpsf2	100	93.901	ENSCVAG00000000095	cpsf2	100	93.901	Cyprinodon_variegatus
ENSNBRG00000022402	cpsf2	100	88.228	ENSDARG00000028971	cpsf2	100	88.228	Danio_rerio
ENSNBRG00000022402	cpsf2	100	85.805	ENSDNOG00000042757	CPSF2	100	85.805	Dasypus_novemcinctus
ENSNBRG00000022402	cpsf2	100	85.805	ENSDORG00000013709	Cpsf2	100	85.805	Dipodomys_ordii
ENSNBRG00000022402	cpsf2	100	53.770	FBgn0027873	Cpsf100	100	53.284	Drosophila_melanogaster
ENSNBRG00000022402	cpsf2	100	78.101	ENSETEG00000012123	CPSF2	100	78.101	Echinops_telfairi
ENSNBRG00000022402	cpsf2	52	77.262	ENSEBUG00000012098	cpsf2	93	77.262	Eptatretus_burgeri
ENSNBRG00000022402	cpsf2	89	90.444	ENSEASG00005021193	CPSF2	100	90.444	Equus_asinus_asinus
ENSNBRG00000022402	cpsf2	100	85.678	ENSECAG00000023935	CPSF2	100	85.678	Equus_caballus
ENSNBRG00000022402	cpsf2	100	88.568	ENSELUG00000008442	cpsf2	100	88.568	Esox_lucius
ENSNBRG00000022402	cpsf2	100	85.678	ENSFCAG00000007886	CPSF2	100	85.678	Felis_catus
ENSNBRG00000022402	cpsf2	100	85.551	ENSFALG00000002412	CPSF2	100	85.551	Ficedula_albicollis
ENSNBRG00000022402	cpsf2	100	85.678	ENSFDAG00000006327	CPSF2	100	85.678	Fukomys_damarensis
ENSNBRG00000022402	cpsf2	96	91.885	ENSFHEG00000015465	cpsf2	98	92.661	Fundulus_heteroclitus
ENSNBRG00000022402	cpsf2	100	89.899	ENSGMOG00000008761	cpsf2	100	89.899	Gadus_morhua
ENSNBRG00000022402	cpsf2	100	86.312	ENSGALG00000010783	CPSF2	100	86.312	Gallus_gallus
ENSNBRG00000022402	cpsf2	100	94.028	ENSGAFG00000001407	cpsf2	100	94.028	Gambusia_affinis
ENSNBRG00000022402	cpsf2	100	94.536	ENSGACG00000008418	cpsf2	100	94.536	Gasterosteus_aculeatus
ENSNBRG00000022402	cpsf2	100	85.316	ENSGAGG00000008287	CPSF2	100	85.316	Gopherus_agassizii
ENSNBRG00000022402	cpsf2	100	85.678	ENSGGOG00000011799	CPSF2	100	85.678	Gorilla_gorilla
ENSNBRG00000022402	cpsf2	100	99.365	ENSHBUG00000023466	cpsf2	100	99.365	Haplochromis_burtoni
ENSNBRG00000022402	cpsf2	100	85.805	ENSHGLG00000018311	CPSF2	100	85.805	Heterocephalus_glaber_female
ENSNBRG00000022402	cpsf2	100	85.805	ENSHGLG00100016460	CPSF2	100	85.805	Heterocephalus_glaber_male
ENSNBRG00000022402	cpsf2	100	92.757	ENSHCOG00000019527	cpsf2	98	92.757	Hippocampus_comes
ENSNBRG00000022402	cpsf2	100	90.241	ENSIPUG00000020857	cpsf2	100	90.241	Ictalurus_punctatus
ENSNBRG00000022402	cpsf2	100	85.805	ENSSTOG00000009528	CPSF2	100	85.805	Ictidomys_tridecemlineatus
ENSNBRG00000022402	cpsf2	100	85.551	ENSJJAG00000017925	Cpsf2	100	85.551	Jaculus_jaculus
ENSNBRG00000022402	cpsf2	100	93.266	ENSKMAG00000019429	cpsf2	100	93.266	Kryptolebias_marmoratus
ENSNBRG00000022402	cpsf2	95	93.691	ENSLBEG00000011585	cpsf2	99	93.691	Labrus_bergylta
ENSNBRG00000022402	cpsf2	100	84.391	ENSLACG00000019024	CPSF2	100	84.537	Latimeria_chalumnae
ENSNBRG00000022402	cpsf2	100	89.128	ENSLOCG00000014102	cpsf2	100	89.128	Lepisosteus_oculatus
ENSNBRG00000022402	cpsf2	100	85.461	ENSLAFG00000004891	CPSF2	100	85.461	Loxodonta_africana
ENSNBRG00000022402	cpsf2	100	85.805	ENSMFAG00000041212	CPSF2	100	85.805	Macaca_fascicularis
ENSNBRG00000022402	cpsf2	100	85.805	ENSMMUG00000000699	CPSF2	100	85.805	Macaca_mulatta
ENSNBRG00000022402	cpsf2	100	85.805	ENSMNEG00000031584	CPSF2	100	85.805	Macaca_nemestrina
ENSNBRG00000022402	cpsf2	100	85.805	ENSMLEG00000029394	CPSF2	100	85.805	Mandrillus_leucophaeus
ENSNBRG00000022402	cpsf2	100	95.299	ENSMAMG00000004235	cpsf2	100	95.299	Mastacembelus_armatus
ENSNBRG00000022402	cpsf2	100	99.492	ENSMZEG00005001769	cpsf2	100	99.492	Maylandia_zebra
ENSNBRG00000022402	cpsf2	100	86.076	ENSMGAG00000013122	CPSF2	100	86.076	Meleagris_gallopavo
ENSNBRG00000022402	cpsf2	100	85.298	ENSMAUG00000015160	Cpsf2	100	85.298	Mesocricetus_auratus
ENSNBRG00000022402	cpsf2	100	85.805	ENSMICG00000016441	CPSF2	100	85.805	Microcebus_murinus
ENSNBRG00000022402	cpsf2	100	85.298	ENSMOCG00000015372	Cpsf2	100	85.298	Microtus_ochrogaster
ENSNBRG00000022402	cpsf2	100	88.056	ENSMMOG00000015590	cpsf2	100	88.183	Mola_mola
ENSNBRG00000022402	cpsf2	100	85.805	ENSMODG00000002042	CPSF2	100	85.805	Monodelphis_domestica
ENSNBRG00000022402	cpsf2	100	91.233	ENSMALG00000022275	cpsf2	100	91.233	Monopterus_albus
ENSNBRG00000022402	cpsf2	100	85.425	ENSMUSG00000041781	Cpsf2	100	85.425	Mus_musculus
ENSNBRG00000022402	cpsf2	100	85.298	MGP_PahariEiJ_G0029791	Cpsf2	100	85.298	Mus_pahari
ENSNBRG00000022402	cpsf2	100	85.425	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.425	Mus_spretus
ENSNBRG00000022402	cpsf2	100	85.932	ENSMPUG00000007617	CPSF2	98	85.932	Mustela_putorius_furo
ENSNBRG00000022402	cpsf2	100	85.678	ENSMLUG00000005570	CPSF2	100	85.678	Myotis_lucifugus
ENSNBRG00000022402	cpsf2	100	85.551	ENSNGAG00000020312	Cpsf2	100	85.551	Nannospalax_galili
ENSNBRG00000022402	cpsf2	100	84.918	ENSNLEG00000017132	CPSF2	100	84.918	Nomascus_leucogenys
ENSNBRG00000022402	cpsf2	91	93.204	ENSMEUG00000008138	CPSF2	91	93.204	Notamacropus_eugenii
ENSNBRG00000022402	cpsf2	86	89.535	ENSOPRG00000008484	-	92	89.535	Ochotona_princeps
ENSNBRG00000022402	cpsf2	100	85.678	ENSODEG00000008682	CPSF2	100	85.678	Octodon_degus
ENSNBRG00000022402	cpsf2	100	98.856	ENSONIG00000005901	cpsf2	100	98.856	Oreochromis_niloticus
ENSNBRG00000022402	cpsf2	100	86.058	ENSOANG00000003822	CPSF2	100	86.058	Ornithorhynchus_anatinus
ENSNBRG00000022402	cpsf2	100	85.551	ENSOCUG00000005713	CPSF2	100	85.551	Oryctolagus_cuniculus
ENSNBRG00000022402	cpsf2	100	86.785	ENSORLG00000011628	cpsf2	100	86.785	Oryzias_latipes
ENSNBRG00000022402	cpsf2	100	92.503	ENSORLG00020016980	cpsf2	100	92.503	Oryzias_latipes_hni
ENSNBRG00000022402	cpsf2	100	92.503	ENSORLG00015011910	cpsf2	100	92.503	Oryzias_latipes_hsok
ENSNBRG00000022402	cpsf2	100	92.766	ENSOMEG00000022876	cpsf2	100	92.893	Oryzias_melastigma
ENSNBRG00000022402	cpsf2	100	82.807	ENSOARG00000012889	CPSF2	100	82.807	Ovis_aries
ENSNBRG00000022402	cpsf2	100	85.678	ENSPPAG00000039666	CPSF2	100	85.678	Pan_paniscus
ENSNBRG00000022402	cpsf2	99	85.660	ENSPPRG00000010869	CPSF2	100	85.660	Panthera_pardus
ENSNBRG00000022402	cpsf2	100	85.678	ENSPTIG00000021202	CPSF2	100	85.678	Panthera_tigris_altaica
ENSNBRG00000022402	cpsf2	100	85.678	ENSPTRG00000006651	CPSF2	100	85.678	Pan_troglodytes
ENSNBRG00000022402	cpsf2	100	85.805	ENSPANG00000017417	CPSF2	100	85.805	Papio_anubis
ENSNBRG00000022402	cpsf2	100	85.044	ENSPKIG00000021453	cpsf2	100	85.044	Paramormyrops_kingsleyae
ENSNBRG00000022402	cpsf2	100	84.918	ENSPSIG00000006289	CPSF2	100	84.918	Pelodiscus_sinensis
ENSNBRG00000022402	cpsf2	76	87.188	ENSPMGG00000002511	cpsf2	99	88.000	Periophthalmus_magnuspinnatus
ENSNBRG00000022402	cpsf2	100	85.425	ENSPEMG00000007917	Cpsf2	100	85.425	Peromyscus_maniculatus_bairdii
ENSNBRG00000022402	cpsf2	100	72.773	ENSPMAG00000006205	cpsf2	100	72.898	Petromyzon_marinus
ENSNBRG00000022402	cpsf2	100	85.805	ENSPCIG00000011393	CPSF2	100	85.805	Phascolarctos_cinereus
ENSNBRG00000022402	cpsf2	100	94.028	ENSPFOG00000018648	cpsf2	100	94.028	Poecilia_formosa
ENSNBRG00000022402	cpsf2	100	94.028	ENSPLAG00000019199	cpsf2	99	94.028	Poecilia_latipinna
ENSNBRG00000022402	cpsf2	96	93.931	ENSPMEG00000012100	cpsf2	99	93.960	Poecilia_mexicana
ENSNBRG00000022402	cpsf2	100	93.647	ENSPREG00000008960	cpsf2	100	93.647	Poecilia_reticulata
ENSNBRG00000022402	cpsf2	64	81.710	ENSPPYG00000029685	-	100	81.710	Pongo_abelii
ENSNBRG00000022402	cpsf2	100	85.678	ENSPCAG00000012477	CPSF2	100	85.678	Procavia_capensis
ENSNBRG00000022402	cpsf2	100	85.932	ENSPCOG00000026387	CPSF2	100	85.932	Propithecus_coquereli
ENSNBRG00000022402	cpsf2	64	91.327	ENSPVAG00000004223	CPSF2	65	91.327	Pteropus_vampyrus
ENSNBRG00000022402	cpsf2	100	98.858	ENSPNYG00000023356	cpsf2	100	98.858	Pundamilia_nyererei
ENSNBRG00000022402	cpsf2	100	90.875	ENSPNAG00000001849	cpsf2	100	90.875	Pygocentrus_nattereri
ENSNBRG00000022402	cpsf2	100	85.425	ENSRNOG00000005733	Cpsf2	100	85.425	Rattus_norvegicus
ENSNBRG00000022402	cpsf2	100	85.805	ENSRBIG00000044792	CPSF2	100	85.805	Rhinopithecus_bieti
ENSNBRG00000022402	cpsf2	100	85.805	ENSRROG00000034875	CPSF2	100	85.805	Rhinopithecus_roxellana
ENSNBRG00000022402	cpsf2	100	85.805	ENSSBOG00000024571	CPSF2	100	85.805	Saimiri_boliviensis_boliviensis
ENSNBRG00000022402	cpsf2	100	85.805	ENSSHAG00000010458	CPSF2	100	85.805	Sarcophilus_harrisii
ENSNBRG00000022402	cpsf2	100	91.001	ENSSFOG00015002117	cpsf2	100	91.255	Scleropages_formosus
ENSNBRG00000022402	cpsf2	100	93.401	ENSSMAG00000002001	cpsf2	100	94.162	Scophthalmus_maximus
ENSNBRG00000022402	cpsf2	100	95.807	ENSSDUG00000004084	cpsf2	100	95.807	Seriola_dumerili
ENSNBRG00000022402	cpsf2	100	95.426	ENSSLDG00000024330	cpsf2	100	95.426	Seriola_lalandi_dorsalis
ENSNBRG00000022402	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSNBRG00000022402	cpsf2	100	85.190	ENSSPUG00000013485	CPSF2	100	85.190	Sphenodon_punctatus
ENSNBRG00000022402	cpsf2	100	95.426	ENSSPAG00000013284	cpsf2	100	95.426	Stegastes_partitus
ENSNBRG00000022402	cpsf2	100	85.551	ENSSSCG00000002447	CPSF2	100	85.551	Sus_scrofa
ENSNBRG00000022402	cpsf2	100	85.678	ENSTGUG00000012571	-	100	85.678	Taeniopygia_guttata
ENSNBRG00000022402	cpsf2	100	92.757	ENSTRUG00000003742	cpsf2	100	92.757	Takifugu_rubripes
ENSNBRG00000022402	cpsf2	100	91.508	ENSTNIG00000012228	cpsf2	100	92.522	Tetraodon_nigroviridis
ENSNBRG00000022402	cpsf2	91	83.913	ENSTBEG00000004530	CPSF2	94	83.913	Tupaia_belangeri
ENSNBRG00000022402	cpsf2	88	84.462	ENSTTRG00000008697	CPSF2	88	84.462	Tursiops_truncatus
ENSNBRG00000022402	cpsf2	100	85.805	ENSUAMG00000028071	CPSF2	100	85.805	Ursus_americanus
ENSNBRG00000022402	cpsf2	100	85.805	ENSUMAG00000005029	CPSF2	99	90.580	Ursus_maritimus
ENSNBRG00000022402	cpsf2	99	85.660	ENSVPAG00000003503	CPSF2	100	85.660	Vicugna_pacos
ENSNBRG00000022402	cpsf2	100	85.678	ENSVVUG00000024642	CPSF2	100	85.678	Vulpes_vulpes
ENSNBRG00000022402	cpsf2	100	84.537	ENSXETG00000010289	cpsf2	100	84.537	Xenopus_tropicalis
ENSNBRG00000022402	cpsf2	100	93.647	ENSXCOG00000001764	cpsf2	100	93.647	Xiphophorus_couchianus
ENSNBRG00000022402	cpsf2	100	94.282	ENSXMAG00000017048	cpsf2	100	94.282	Xiphophorus_maculatus