EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000022606 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 967 bases
Position: chrJH422279.1:11805657-11806623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000029686	SM-ATX	PF14438.6	5.4e-09	1	1
ENSNBRP00000029686	LSM14	PF12701.7	3.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030448	-	402	-	ENSNBRP00000029686	133 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000022606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000022606	-	75	66.000	ENSNBRG00000022370	-	95	66.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022606	-	67	65.169	ENSAPOG00000009997	-	82	65.169	Acanthochromis_polyacanthus
ENSNBRG00000022606	-	74	66.327	ENSACIG00000003134	-	80	66.327	Amphilophus_citrinellus
ENSNBRG00000022606	-	74	63.265	ENSAPEG00000013779	-	97	63.265	Amphiprion_percula
ENSNBRG00000022606	-	58	71.429	ENSATEG00000015882	-	88	71.429	Anabas_testudineus
ENSNBRG00000022606	-	71	90.526	ENSCVAG00000005570	-	98	90.526	Cyprinodon_variegatus
ENSNBRG00000022606	-	72	67.708	ENSCVAG00000012411	-	99	67.708	Cyprinodon_variegatus
ENSNBRG00000022606	-	72	65.625	ENSGAFG00000013718	-	99	65.625	Gambusia_affinis
ENSNBRG00000022606	-	100	99.248	ENSHBUG00000011864	-	100	99.248	Haplochromis_burtoni
ENSNBRG00000022606	-	75	65.000	ENSHBUG00000012323	-	95	65.000	Haplochromis_burtoni
ENSNBRG00000022606	-	71	89.362	ENSHCOG00000004862	-	86	89.362	Hippocampus_comes
ENSNBRG00000022606	-	71	66.316	ENSKMAG00000012850	-	98	66.316	Kryptolebias_marmoratus
ENSNBRG00000022606	-	67	64.045	ENSKMAG00000016674	-	96	55.000	Kryptolebias_marmoratus
ENSNBRG00000022606	-	83	77.236	ENSLBEG00000016427	lsm14b	86	77.236	Labrus_bergylta
ENSNBRG00000022606	-	68	72.527	ENSLBEG00000007971	-	88	72.527	Labrus_bergylta
ENSNBRG00000022606	-	74	76.531	ENSNGAG00000016305	-	76	78.947	Nannospalax_galili
ENSNBRG00000022606	-	72	65.979	ENSORLG00020018184	-	99	65.979	Oryzias_latipes_hni
ENSNBRG00000022606	-	59	67.089	ENSOMEG00000007241	-	95	67.089	Oryzias_melastigma
ENSNBRG00000022606	-	70	82.796	ENSPKIG00000003275	lsm14b	86	82.796	Paramormyrops_kingsleyae
ENSNBRG00000022606	-	57	60.526	ENSPMGG00000004595	-	77	60.526	Periophthalmus_magnuspinnatus
ENSNBRG00000022606	-	89	81.513	ENSPMGG00000014569	lsm14b	66	81.513	Periophthalmus_magnuspinnatus
ENSNBRG00000022606	-	71	89.474	ENSPREG00000016484	-	62	89.474	Poecilia_reticulata
ENSNBRG00000022606	-	62	65.854	ENSPREG00000007817	-	94	65.854	Poecilia_reticulata
ENSNBRG00000022606	-	75	65.000	ENSPNYG00000021706	-	94	65.000	Pundamilia_nyererei
ENSNBRG00000022606	-	100	99.248	ENSPNYG00000019601	-	100	99.248	Pundamilia_nyererei
ENSNBRG00000022606	-	65	94.318	ENSSLDG00000011706	-	96	94.318	Seriola_lalandi_dorsalis
ENSNBRG00000022606	-	60	71.250	ENSSLDG00000012686	-	87	71.250	Seriola_lalandi_dorsalis
ENSNBRG00000022606	-	60	71.250	ENSSLDG00000011341	-	87	71.250	Seriola_lalandi_dorsalis
ENSNBRG00000022606	-	67	67.416	ENSSPAG00000018837	-	88	67.416	Stegastes_partitus
ENSNBRG00000022606	-	73	90.816	ENSXCOG00000017365	-	99	90.816	Xiphophorus_couchianus
ENSNBRG00000022606	-	64	62.353	ENSXCOG00000011423	-	93	62.353	Xiphophorus_couchianus
ENSNBRG00000022606	-	64	62.353	ENSXMAG00000015481	-	93	62.353	Xiphophorus_maculatus