EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000022685 (Gene tree)
Gene ID: 102789314
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 25182 bases
Position: chrJH422317.1:4032874-4058055
Accession: 102789314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000029832	RRM_1	PF00076.22	7.4e-16	1	1
ENSNBRP00000029844	RRM_1	PF00076.22	7.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030595	-	723	-	ENSNBRP00000029832	240 (aa)	-	-
ENSNBRT00000030607	-	753	XM_006796499	ENSNBRP00000029844	250 (aa)	XP_006796562	UPI0003EBC67B

Gene Model

Click here to download ENSNBRG00000022685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000022685	rbm38	64	69.182	ENSNBRG00000015853	rbm24b	100	57.983
ENSNBRG00000022685	rbm38	83	30.208	ENSNBRG00000000841	-	86	30.208
ENSNBRG00000022685	rbm38	81	58.454	ENSNBRG00000012347	rbm24a	100	58.650
ENSNBRG00000022685	rbm38	98	63.529	ENSNBRG00000022545	-	100	64.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022685	rbm38	97	58.921	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSNBRG00000022685	rbm38	100	94.000	ENSAPOG00000003301	rbm38	100	94.000	Acanthochromis_polyacanthus
ENSNBRG00000022685	rbm38	98	64.683	ENSAPOG00000009939	-	100	65.098	Acanthochromis_polyacanthus
ENSNBRG00000022685	rbm38	100	94.800	ENSACIG00000000010	rbm38	100	94.800	Amphilophus_citrinellus
ENSNBRG00000022685	rbm38	98	64.032	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSNBRG00000022685	rbm38	100	94.000	ENSAOCG00000013497	-	100	94.000	Amphiprion_ocellaris
ENSNBRG00000022685	rbm38	95	65.000	ENSAOCG00000012559	RBM38	98	65.432	Amphiprion_ocellaris
ENSNBRG00000022685	rbm38	100	94.000	ENSAPEG00000013137	rbm38	100	94.000	Amphiprion_percula
ENSNBRG00000022685	rbm38	98	63.889	ENSAPEG00000023581	-	100	64.314	Amphiprion_percula
ENSNBRG00000022685	rbm38	100	88.400	ENSATEG00000016366	rbm38	100	88.400	Anabas_testudineus
ENSNBRG00000022685	rbm38	98	65.079	ENSATEG00000016710	-	100	65.490	Anabas_testudineus
ENSNBRG00000022685	rbm38	91	59.111	ENSACAG00000016238	RBM38	90	59.111	Anolis_carolinensis
ENSNBRG00000022685	rbm38	91	61.161	ENSANAG00000031959	RBM38	92	79.130	Aotus_nancymaae
ENSNBRG00000022685	rbm38	98	64.542	ENSACLG00000019514	-	100	64.542	Astatotilapia_calliptera
ENSNBRG00000022685	rbm38	98	61.600	ENSAMXG00000015601	-	100	61.600	Astyanax_mexicanus
ENSNBRG00000022685	rbm38	95	56.303	ENSAMXG00000038120	rbm38	96	56.303	Astyanax_mexicanus
ENSNBRG00000022685	rbm38	91	61.161	ENSBTAG00000008105	RBM38	90	61.161	Bos_taurus
ENSNBRG00000022685	rbm38	60	60.000	WBGene00006321	sup-12	68	72.549	Caenorhabditis_elegans
ENSNBRG00000022685	rbm38	98	58.750	ENSCJAG00000019139	RBM38	92	79.130	Callithrix_jacchus
ENSNBRG00000022685	rbm38	98	60.000	ENSCAFG00020021943	RBM38	96	60.000	Canis_lupus_dingo
ENSNBRG00000022685	rbm38	89	60.731	ENSCHIG00000002609	RBM38	89	60.731	Capra_hircus
ENSNBRG00000022685	rbm38	98	60.417	ENSCPOG00000012781	RBM38	96	60.417	Cavia_porcellus
ENSNBRG00000022685	rbm38	98	58.750	ENSCCAG00000036872	RBM38	92	79.130	Cebus_capucinus
ENSNBRG00000022685	rbm38	98	60.000	ENSCATG00000032133	RBM38	92	79.130	Cercocebus_atys
ENSNBRG00000022685	rbm38	99	59.504	ENSCLAG00000005906	RBM38	100	59.504	Chinchilla_lanigera
ENSNBRG00000022685	rbm38	98	60.000	ENSCSAG00000015503	RBM38	96	60.000	Chlorocebus_sabaeus
ENSNBRG00000022685	rbm38	91	60.352	ENSCPBG00000024059	RBM38	100	60.352	Chrysemys_picta_bellii
ENSNBRG00000022685	rbm38	62	62.420	ENSCING00000025102	-	66	62.420	Ciona_intestinalis
ENSNBRG00000022685	rbm38	63	59.494	ENSCSAVG00000001132	-	58	59.494	Ciona_savignyi
ENSNBRG00000022685	rbm38	97	46.218	ENSCANG00000030105	-	86	46.218	Colobus_angolensis_palliatus
ENSNBRG00000022685	rbm38	84	61.165	ENSCGRG00001012928	Rbm38	100	58.130	Cricetulus_griseus_chok1gshd
ENSNBRG00000022685	rbm38	98	65.339	ENSCSEG00000004701	-	100	64.683	Cynoglossus_semilaevis
ENSNBRG00000022685	rbm38	84	66.986	ENSCSEG00000020943	rbm38	68	66.986	Cynoglossus_semilaevis
ENSNBRG00000022685	rbm38	100	84.400	ENSCVAG00000015952	rbm38	100	84.400	Cyprinodon_variegatus
ENSNBRG00000022685	rbm38	98	63.889	ENSCVAG00000005472	-	100	64.314	Cyprinodon_variegatus
ENSNBRG00000022685	rbm38	98	63.968	ENSDARG00000058818	rbm38	100	63.968	Danio_rerio
ENSNBRG00000022685	rbm38	91	60.360	ENSDNOG00000032004	RBM38	100	60.360	Dasypus_novemcinctus
ENSNBRG00000022685	rbm38	98	59.167	ENSECAG00000007700	RBM38	96	59.167	Equus_caballus
ENSNBRG00000022685	rbm38	96	58.898	ENSEEUG00000013489	RBM38	93	58.898	Erinaceus_europaeus
ENSNBRG00000022685	rbm38	92	73.478	ENSELUG00000000585	-	100	73.478	Esox_lucius
ENSNBRG00000022685	rbm38	98	64.314	ENSELUG00000005849	-	100	64.314	Esox_lucius
ENSNBRG00000022685	rbm38	98	59.167	ENSFCAG00000042916	RBM38	92	78.261	Felis_catus
ENSNBRG00000022685	rbm38	73	68.927	ENSFALG00000010805	RBM38	95	64.921	Ficedula_albicollis
ENSNBRG00000022685	rbm38	98	61.719	ENSFHEG00000006160	-	100	61.719	Fundulus_heteroclitus
ENSNBRG00000022685	rbm38	100	85.657	ENSFHEG00000017748	rbm38	100	85.657	Fundulus_heteroclitus
ENSNBRG00000022685	rbm38	77	69.519	ENSGMOG00000016655	-	99	72.193	Gadus_morhua
ENSNBRG00000022685	rbm38	91	60.268	ENSGALG00000026081	RBM38	100	60.268	Gallus_gallus
ENSNBRG00000022685	rbm38	91	83.105	ENSGACG00000015224	rbm38	100	83.105	Gasterosteus_aculeatus
ENSNBRG00000022685	rbm38	91	65.625	ENSGACG00000009873	-	100	65.625	Gasterosteus_aculeatus
ENSNBRG00000022685	rbm38	91	61.233	ENSGAGG00000001187	RBM38	100	61.233	Gopherus_agassizii
ENSNBRG00000022685	rbm38	98	64.542	ENSHBUG00000011778	-	100	64.542	Haplochromis_burtoni
ENSNBRG00000022685	rbm38	100	99.200	ENSHBUG00000012058	rbm38	100	99.200	Haplochromis_burtoni
ENSNBRG00000022685	rbm38	91	61.161	ENSHGLG00000015077	RBM38	90	61.161	Heterocephalus_glaber_female
ENSNBRG00000022685	rbm38	100	61.753	ENSHCOG00000019040	rbm38	100	61.753	Hippocampus_comes
ENSNBRG00000022685	rbm38	84	67.453	ENSHCOG00000005622	-	59	68.396	Hippocampus_comes
ENSNBRG00000022685	rbm38	98	60.400	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSNBRG00000022685	rbm38	91	74.043	ENSKMAG00000012402	rbm38	99	74.043	Kryptolebias_marmoratus
ENSNBRG00000022685	rbm38	100	88.400	ENSLBEG00000018878	rbm38	100	88.400	Labrus_bergylta
ENSNBRG00000022685	rbm38	98	62.550	ENSLBEG00000016163	RBM38	100	63.556	Labrus_bergylta
ENSNBRG00000022685	rbm38	98	65.726	ENSLOCG00000003456	rbm38	97	68.996	Lepisosteus_oculatus
ENSNBRG00000022685	rbm38	98	60.000	ENSMFAG00000043808	RBM38	92	79.130	Macaca_fascicularis
ENSNBRG00000022685	rbm38	98	60.000	ENSMMUG00000031391	RBM38	92	79.130	Macaca_mulatta
ENSNBRG00000022685	rbm38	98	60.000	ENSMNEG00000034683	RBM38	92	79.130	Macaca_nemestrina
ENSNBRG00000022685	rbm38	98	66.534	ENSMAMG00000020499	RBM38	100	66.929	Mastacembelus_armatus
ENSNBRG00000022685	rbm38	100	90.800	ENSMAMG00000024135	rbm38	100	90.800	Mastacembelus_armatus
ENSNBRG00000022685	rbm38	98	64.542	ENSMZEG00005000849	-	100	64.542	Maylandia_zebra
ENSNBRG00000022685	rbm38	100	99.200	ENSMZEG00005026036	rbm38	100	99.200	Maylandia_zebra
ENSNBRG00000022685	rbm38	99	57.317	ENSMAUG00000021211	Rbm38	100	58.943	Mesocricetus_auratus
ENSNBRG00000022685	rbm38	91	61.161	ENSMICG00000038011	RBM38	100	61.161	Microcebus_murinus
ENSNBRG00000022685	rbm38	99	56.911	ENSMOCG00000008715	Rbm38	100	58.537	Microtus_ochrogaster
ENSNBRG00000022685	rbm38	98	63.889	ENSMMOG00000020051	-	100	64.314	Mola_mola
ENSNBRG00000022685	rbm38	95	58.228	ENSMODG00000016458	RBM38	97	59.072	Monodelphis_domestica
ENSNBRG00000022685	rbm38	100	73.600	ENSMALG00000022327	rbm38	100	74.400	Monopterus_albus
ENSNBRG00000022685	rbm38	78	73.016	ENSMALG00000004680	RBM38	89	64.435	Monopterus_albus
ENSNBRG00000022685	rbm38	99	57.724	MGP_CAROLIEiJ_G0024745	Rbm38	100	57.724	Mus_caroli
ENSNBRG00000022685	rbm38	99	57.724	ENSMUSG00000027510	Rbm38	100	57.724	Mus_musculus
ENSNBRG00000022685	rbm38	99	57.724	MGP_PahariEiJ_G0026186	Rbm38	100	57.724	Mus_pahari
ENSNBRG00000022685	rbm38	99	57.724	MGP_SPRETEiJ_G0025665	Rbm38	100	57.724	Mus_spretus
ENSNBRG00000022685	rbm38	75	65.761	ENSMPUG00000006518	RBM38	98	61.951	Mustela_putorius_furo
ENSNBRG00000022685	rbm38	91	60.714	ENSMLUG00000011140	RBM38	100	60.714	Myotis_lucifugus
ENSNBRG00000022685	rbm38	53	67.969	ENSMEUG00000005475	-	95	67.969	Notamacropus_eugenii
ENSNBRG00000022685	rbm38	98	60.417	ENSODEG00000007980	RBM38	96	60.417	Octodon_degus
ENSNBRG00000022685	rbm38	98	64.400	ENSONIG00000020324	-	100	64.400	Oreochromis_niloticus
ENSNBRG00000022685	rbm38	98	98.776	ENSONIG00000017073	rbm38	100	98.776	Oreochromis_niloticus
ENSNBRG00000022685	rbm38	89	60.550	ENSOANG00000009259	RBM38	81	60.092	Ornithorhynchus_anatinus
ENSNBRG00000022685	rbm38	98	62.205	ENSORLG00000027180	-	100	63.035	Oryzias_latipes
ENSNBRG00000022685	rbm38	100	81.673	ENSORLG00000012154	rbm38	100	81.673	Oryzias_latipes
ENSNBRG00000022685	rbm38	100	81.673	ENSORLG00020017871	rbm38	100	81.673	Oryzias_latipes_hni
ENSNBRG00000022685	rbm38	100	61.628	ENSORLG00020020751	-	100	63.035	Oryzias_latipes_hni
ENSNBRG00000022685	rbm38	100	81.673	ENSORLG00015012606	rbm38	100	81.673	Oryzias_latipes_hsok
ENSNBRG00000022685	rbm38	98	62.451	ENSORLG00015017040	-	100	63.636	Oryzias_latipes_hsok
ENSNBRG00000022685	rbm38	100	80.876	ENSOMEG00000006805	rbm38	100	80.876	Oryzias_melastigma
ENSNBRG00000022685	rbm38	98	63.492	ENSOMEG00000023912	-	100	64.286	Oryzias_melastigma
ENSNBRG00000022685	rbm38	97	58.921	ENSOGAG00000029136	RBM38	97	58.921	Otolemur_garnettii
ENSNBRG00000022685	rbm38	98	59.167	ENSPPRG00000009507	RBM38	92	78.261	Panthera_pardus
ENSNBRG00000022685	rbm38	60	72.414	ENSPTRG00000045845	-	77	72.414	Pan_troglodytes
ENSNBRG00000022685	rbm38	81	63.959	ENSPTRG00000013661	RBM38	94	78.448	Pan_troglodytes
ENSNBRG00000022685	rbm38	97	48.523	ENSPANG00000033127	-	97	47.899	Papio_anubis
ENSNBRG00000022685	rbm38	98	60.000	ENSPANG00000020919	-	92	79.130	Papio_anubis
ENSNBRG00000022685	rbm38	98	59.200	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSNBRG00000022685	rbm38	97	62.348	ENSPKIG00000025417	rbm38	100	63.672	Paramormyrops_kingsleyae
ENSNBRG00000022685	rbm38	99	57.959	ENSPSIG00000011649	RBM38	100	57.959	Pelodiscus_sinensis
ENSNBRG00000022685	rbm38	98	60.630	ENSPMGG00000017094	-	100	61.024	Periophthalmus_magnuspinnatus
ENSNBRG00000022685	rbm38	100	77.689	ENSPMGG00000011343	rbm38	100	80.080	Periophthalmus_magnuspinnatus
ENSNBRG00000022685	rbm38	93	60.526	ENSPCIG00000013648	RBM38	94	60.526	Phascolarctos_cinereus
ENSNBRG00000022685	rbm38	100	86.220	ENSPFOG00000011658	rbm38	100	86.220	Poecilia_formosa
ENSNBRG00000022685	rbm38	98	63.281	ENSPLAG00000002500	-	100	64.542	Poecilia_latipinna
ENSNBRG00000022685	rbm38	100	85.827	ENSPLAG00000005218	rbm38	100	85.827	Poecilia_latipinna
ENSNBRG00000022685	rbm38	100	86.614	ENSPMEG00000015770	rbm38	100	86.614	Poecilia_mexicana
ENSNBRG00000022685	rbm38	100	85.827	ENSPREG00000007398	rbm38	100	85.827	Poecilia_reticulata
ENSNBRG00000022685	rbm38	99	58.300	ENSPCOG00000026201	RBM38	94	77.586	Propithecus_coquereli
ENSNBRG00000022685	rbm38	83	39.801	ENSPVAG00000006457	RBM38	96	40.417	Pteropus_vampyrus
ENSNBRG00000022685	rbm38	98	64.542	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSNBRG00000022685	rbm38	100	98.800	ENSPNYG00000021373	rbm38	100	98.800	Pundamilia_nyererei
ENSNBRG00000022685	rbm38	95	61.088	ENSPNAG00000010596	rbm38	96	61.088	Pygocentrus_nattereri
ENSNBRG00000022685	rbm38	98	62.400	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSNBRG00000022685	rbm38	99	58.943	ENSRNOG00000006420	Rbm38	100	58.943	Rattus_norvegicus
ENSNBRG00000022685	rbm38	97	52.521	ENSRROG00000036388	-	97	52.521	Rhinopithecus_roxellana
ENSNBRG00000022685	rbm38	91	60.268	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSNBRG00000022685	rbm38	98	57.200	ENSSFOG00015004453	rbm38	100	61.200	Scleropages_formosus
ENSNBRG00000022685	rbm38	98	65.079	ENSSDUG00000021082	RBM38	100	65.882	Seriola_dumerili
ENSNBRG00000022685	rbm38	100	93.200	ENSSDUG00000022611	rbm38	100	93.200	Seriola_dumerili
ENSNBRG00000022685	rbm38	98	65.079	ENSSLDG00000011778	RBM38	100	65.882	Seriola_lalandi_dorsalis
ENSNBRG00000022685	rbm38	100	93.200	ENSSLDG00000010845	rbm38	100	93.200	Seriola_lalandi_dorsalis
ENSNBRG00000022685	rbm38	98	65.079	ENSSPAG00000020989	RBM38	100	65.098	Stegastes_partitus
ENSNBRG00000022685	rbm38	100	94.400	ENSSPAG00000011113	rbm38	100	94.400	Stegastes_partitus
ENSNBRG00000022685	rbm38	98	59.583	ENSSSCG00000007504	RBM38	96	59.583	Sus_scrofa
ENSNBRG00000022685	rbm38	98	62.698	ENSTRUG00000019869	-	100	62.302	Takifugu_rubripes
ENSNBRG00000022685	rbm38	100	82.800	ENSTRUG00000024954	rbm38	100	83.600	Takifugu_rubripes
ENSNBRG00000022685	rbm38	91	66.814	ENSTNIG00000007093	-	100	66.814	Tetraodon_nigroviridis
ENSNBRG00000022685	rbm38	98	59.583	ENSUAMG00000019780	RBM38	96	59.583	Ursus_americanus
ENSNBRG00000022685	rbm38	98	60.000	ENSVVUG00000017246	RBM38	96	60.000	Vulpes_vulpes
ENSNBRG00000022685	rbm38	91	59.009	ENSXETG00000011268	rbm38	99	60.352	Xenopus_tropicalis
ENSNBRG00000022685	rbm38	52	77.692	ENSXCOG00000017324	-	62	75.735	Xiphophorus_couchianus
ENSNBRG00000022685	rbm38	100	88.000	ENSXMAG00000023662	rbm38	100	88.000	Xiphophorus_maculatus