EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000022690 (Gene tree)
Gene ID: 102792203
Gene Symbol: trmu
Alias: zgc:110555
Full Name: mitochondrial tRNA-specific 2-thiouridylase 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4066 bases
Position: chrJH422274.1:1069948-1074013
Accession: 102792203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000029861	tRNA_Me_trans	PF03054.16	1.1e-135	1	1
ENSNBRP00000029867	tRNA_Me_trans	PF03054.16	1.2e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030630	-	1251	XM_006780554	ENSNBRP00000029867	416 (aa)	XP_006780617	UPI0003EC307A
ENSNBRT00000030624	-	1221	-	ENSNBRP00000029861	406 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000022690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022690	trmu	99	70.864	ENSG00000100416	TRMU	96	76.101	Homo_sapiens
ENSNBRG00000022690	trmu	100	88.489	ENSAPOG00000014458	trmu	100	88.489	Acanthochromis_polyacanthus
ENSNBRG00000022690	trmu	99	70.149	ENSAMEG00000003319	TRMU	96	70.426	Ailuropoda_melanoleuca
ENSNBRG00000022690	trmu	100	93.510	ENSACIG00000002101	trmu	100	93.510	Amphilophus_citrinellus
ENSNBRG00000022690	trmu	100	89.209	ENSAOCG00000013155	trmu	100	89.209	Amphiprion_ocellaris
ENSNBRG00000022690	trmu	100	88.969	ENSAPEG00000013350	trmu	100	88.969	Amphiprion_percula
ENSNBRG00000022690	trmu	100	85.468	ENSATEG00000007814	trmu	100	84.856	Anabas_testudineus
ENSNBRG00000022690	trmu	93	72.944	ENSAPLG00000016380	TRMU	98	71.835	Anas_platyrhynchos
ENSNBRG00000022690	trmu	99	70.324	ENSACAG00000007720	TRMU	96	70.324	Anolis_carolinensis
ENSNBRG00000022690	trmu	99	70.123	ENSANAG00000038053	TRMU	96	70.123	Aotus_nancymaae
ENSNBRG00000022690	trmu	100	99.038	ENSACLG00000005395	trmu	100	99.038	Astatotilapia_calliptera
ENSNBRG00000022690	trmu	99	79.753	ENSAMXG00000005282	trmu	99	79.218	Astyanax_mexicanus
ENSNBRG00000022690	trmu	100	70.197	ENSBTAG00000005595	TRMU	97	70.197	Bos_taurus
ENSNBRG00000022690	trmu	94	40.513	WBGene00007114	mttu-1	98	40.513	Caenorhabditis_elegans
ENSNBRG00000022690	trmu	98	69.849	ENSCJAG00000000198	TRMU	99	67.866	Callithrix_jacchus
ENSNBRG00000022690	trmu	100	70.197	ENSCAFG00000000779	TRMU	96	70.197	Canis_familiaris
ENSNBRG00000022690	trmu	100	70.197	ENSCAFG00020009184	TRMU	96	70.197	Canis_lupus_dingo
ENSNBRG00000022690	trmu	100	69.951	ENSCHIG00000017074	TRMU	97	69.951	Capra_hircus
ENSNBRG00000022690	trmu	100	70.690	ENSTSYG00000003853	TRMU	96	70.720	Carlito_syrichta
ENSNBRG00000022690	trmu	97	65.366	ENSCAPG00000013034	TRMU	96	66.093	Cavia_aperea
ENSNBRG00000022690	trmu	100	69.212	ENSCPOG00000020780	TRMU	96	69.975	Cavia_porcellus
ENSNBRG00000022690	trmu	99	68.889	ENSCCAG00000021641	TRMU	99	68.029	Cebus_capucinus
ENSNBRG00000022690	trmu	98	70.603	ENSCATG00000032800	TRMU	95	70.677	Cercocebus_atys
ENSNBRG00000022690	trmu	100	69.704	ENSCLAG00000017269	TRMU	96	70.223	Chinchilla_lanigera
ENSNBRG00000022690	trmu	98	70.603	ENSCSAG00000005279	TRMU	96	69.877	Chlorocebus_sabaeus
ENSNBRG00000022690	trmu	91	72.162	ENSCPBG00000011621	TRMU	93	72.162	Chrysemys_picta_bellii
ENSNBRG00000022690	trmu	97	46.851	ENSCING00000019371	-	97	46.851	Ciona_intestinalis
ENSNBRG00000022690	trmu	98	70.101	ENSCANG00000041645	TRMU	96	69.383	Colobus_angolensis_palliatus
ENSNBRG00000022690	trmu	99	69.383	ENSCGRG00001001739	Trmu	97	69.383	Cricetulus_griseus_chok1gshd
ENSNBRG00000022690	trmu	99	64.198	ENSCGRG00000002781	Trmu	97	64.198	Cricetulus_griseus_crigri
ENSNBRG00000022690	trmu	99	80.247	ENSCSEG00000012382	trmu	99	79.710	Cynoglossus_semilaevis
ENSNBRG00000022690	trmu	99	89.250	ENSCVAG00000001366	trmu	100	87.500	Cyprinodon_variegatus
ENSNBRG00000022690	trmu	100	74.519	ENSDARG00000043734	trmu	100	74.519	Danio_rerio
ENSNBRG00000022690	trmu	66	56.343	ENSDNOG00000047245	-	95	56.089	Dasypus_novemcinctus
ENSNBRG00000022690	trmu	100	69.704	ENSDORG00000007455	Trmu	99	69.704	Dipodomys_ordii
ENSNBRG00000022690	trmu	95	44.041	FBgn0040337	CG3021	95	44.041	Drosophila_melanogaster
ENSNBRG00000022690	trmu	98	55.500	ENSEBUG00000007454	trmu	99	55.500	Eptatretus_burgeri
ENSNBRG00000022690	trmu	100	71.429	ENSEASG00005021725	TRMU	96	71.429	Equus_asinus_asinus
ENSNBRG00000022690	trmu	100	71.429	ENSECAG00000000467	TRMU	96	71.429	Equus_caballus
ENSNBRG00000022690	trmu	71	53.310	ENSEEUG00000000074	-	68	53.310	Erinaceus_europaeus
ENSNBRG00000022690	trmu	99	80.000	ENSELUG00000009464	trmu	99	80.978	Esox_lucius
ENSNBRG00000022690	trmu	100	70.690	ENSFCAG00000006533	TRMU	96	70.690	Felis_catus
ENSNBRG00000022690	trmu	91	71.958	ENSFALG00000010035	TRMU	96	71.842	Ficedula_albicollis
ENSNBRG00000022690	trmu	91	69.648	ENSFDAG00000017472	TRMU	95	69.251	Fukomys_damarensis
ENSNBRG00000022690	trmu	99	88.500	ENSFHEG00000003162	trmu	100	87.260	Fundulus_heteroclitus
ENSNBRG00000022690	trmu	99	72.236	ENSGMOG00000001323	trmu	100	73.219	Gadus_morhua
ENSNBRG00000022690	trmu	98	72.660	ENSGALG00000031922	TRMU	96	72.727	Gallus_gallus
ENSNBRG00000022690	trmu	99	89.000	ENSGAFG00000013331	trmu	98	88.293	Gambusia_affinis
ENSNBRG00000022690	trmu	100	85.106	ENSGACG00000019024	trmu	100	85.106	Gasterosteus_aculeatus
ENSNBRG00000022690	trmu	99	70.617	ENSGGOG00000000203	TRMU	98	69.976	Gorilla_gorilla
ENSNBRG00000022690	trmu	100	99.038	ENSHBUG00000023421	trmu	100	99.038	Haplochromis_burtoni
ENSNBRG00000022690	trmu	98	69.949	ENSHGLG00000009278	TRMU	95	69.403	Heterocephalus_glaber_female
ENSNBRG00000022690	trmu	98	69.949	ENSHGLG00100018863	TRMU	95	69.403	Heterocephalus_glaber_male
ENSNBRG00000022690	trmu	98	85.678	ENSHCOG00000013459	trmu	99	84.300	Hippocampus_comes
ENSNBRG00000022690	trmu	99	78.765	ENSIPUG00000009785	trmu	99	78.765	Ictalurus_punctatus
ENSNBRG00000022690	trmu	100	70.443	ENSSTOG00000010993	TRMU	96	70.471	Ictidomys_tridecemlineatus
ENSNBRG00000022690	trmu	100	68.966	ENSJJAG00000000667	Trmu	97	68.966	Jaculus_jaculus
ENSNBRG00000022690	trmu	100	84.856	ENSKMAG00000008516	trmu	100	84.856	Kryptolebias_marmoratus
ENSNBRG00000022690	trmu	100	86.058	ENSLBEG00000018831	trmu	100	86.058	Labrus_bergylta
ENSNBRG00000022690	trmu	99	76.675	ENSLACG00000013713	TRMU	96	76.675	Latimeria_chalumnae
ENSNBRG00000022690	trmu	99	79.104	ENSLOCG00000016066	trmu	96	79.250	Lepisosteus_oculatus
ENSNBRG00000022690	trmu	100	62.836	ENSLAFG00000005129	TRMU	99	61.836	Loxodonta_africana
ENSNBRG00000022690	trmu	98	70.854	ENSMFAG00000039767	TRMU	96	70.123	Macaca_fascicularis
ENSNBRG00000022690	trmu	98	70.854	ENSMMUG00000000807	TRMU	96	70.123	Macaca_mulatta
ENSNBRG00000022690	trmu	98	70.854	ENSMNEG00000028164	TRMU	96	70.123	Macaca_nemestrina
ENSNBRG00000022690	trmu	98	70.603	ENSMLEG00000033884	TRMU	95	70.677	Mandrillus_leucophaeus
ENSNBRG00000022690	trmu	100	85.577	ENSMAMG00000004717	trmu	100	85.577	Mastacembelus_armatus
ENSNBRG00000022690	trmu	100	98.798	ENSMZEG00005015797	trmu	100	98.798	Maylandia_zebra
ENSNBRG00000022690	trmu	78	72.222	ENSMGAG00000007550	TRMU	95	72.222	Meleagris_gallopavo
ENSNBRG00000022690	trmu	99	68.642	ENSMAUG00000022282	Trmu	97	68.642	Mesocricetus_auratus
ENSNBRG00000022690	trmu	100	69.212	ENSMICG00000029046	TRMU	98	69.212	Microcebus_murinus
ENSNBRG00000022690	trmu	99	69.383	ENSMOCG00000014641	Trmu	97	69.727	Microtus_ochrogaster
ENSNBRG00000022690	trmu	100	82.692	ENSMMOG00000007229	trmu	100	82.692	Mola_mola
ENSNBRG00000022690	trmu	99	66.832	ENSMODG00000007433	TRMU	94	66.832	Monodelphis_domestica
ENSNBRG00000022690	trmu	100	85.337	ENSMALG00000007721	trmu	100	85.337	Monopterus_albus
ENSNBRG00000022690	trmu	100	68.473	MGP_CAROLIEiJ_G0020134	Trmu	99	67.883	Mus_caroli
ENSNBRG00000022690	trmu	100	68.966	ENSMUSG00000022386	Trmu	99	68.116	Mus_musculus
ENSNBRG00000022690	trmu	100	68.719	MGP_PahariEiJ_G0020139	Trmu	99	67.874	Mus_pahari
ENSNBRG00000022690	trmu	100	68.966	MGP_SPRETEiJ_G0021031	Trmu	99	68.116	Mus_spretus
ENSNBRG00000022690	trmu	100	69.704	ENSMPUG00000002523	TRMU	96	69.704	Mustela_putorius_furo
ENSNBRG00000022690	trmu	100	69.458	ENSNGAG00000005132	Trmu	99	68.675	Nannospalax_galili
ENSNBRG00000022690	trmu	98	71.106	ENSNLEG00000015773	TRMU	96	70.720	Nomascus_leucogenys
ENSNBRG00000022690	trmu	81	58.410	ENSMEUG00000000216	TRMU	99	58.410	Notamacropus_eugenii
ENSNBRG00000022690	trmu	100	69.212	ENSODEG00000014745	TRMU	98	68.873	Octodon_degus
ENSNBRG00000022690	trmu	100	98.077	ENSONIG00000009821	trmu	100	98.077	Oreochromis_niloticus
ENSNBRG00000022690	trmu	93	64.524	ENSOANG00000001891	TRMU	98	64.524	Ornithorhynchus_anatinus
ENSNBRG00000022690	trmu	93	69.577	ENSOCUG00000003664	TRMU	95	68.434	Oryctolagus_cuniculus
ENSNBRG00000022690	trmu	99	82.716	ENSORLG00000019015	trmu	99	82.567	Oryzias_latipes
ENSNBRG00000022690	trmu	99	82.963	ENSORLG00020006830	trmu	99	82.809	Oryzias_latipes_hni
ENSNBRG00000022690	trmu	99	82.963	ENSORLG00015003907	trmu	99	82.809	Oryzias_latipes_hsok
ENSNBRG00000022690	trmu	56	88.987	ENSOMEG00000015541	trmu	83	89.520	Oryzias_melastigma
ENSNBRG00000022690	trmu	100	68.473	ENSOGAG00000008096	TRMU	97	68.486	Otolemur_garnettii
ENSNBRG00000022690	trmu	94	67.632	ENSOARG00000019475	TRMU	93	67.632	Ovis_aries
ENSNBRG00000022690	trmu	99	70.617	ENSPPAG00000033944	TRMU	98	69.976	Pan_paniscus
ENSNBRG00000022690	trmu	99	70.370	ENSPPRG00000004197	TRMU	96	70.443	Panthera_pardus
ENSNBRG00000022690	trmu	68	71.119	ENSPTIG00000014122	TRMU	97	72.727	Panthera_tigris_altaica
ENSNBRG00000022690	trmu	99	70.617	ENSPTRG00000014510	TRMU	98	69.976	Pan_troglodytes
ENSNBRG00000022690	trmu	98	70.603	ENSPANG00000023074	TRMU	97	67.945	Papio_anubis
ENSNBRG00000022690	trmu	100	77.404	ENSPKIG00000002849	trmu	100	77.404	Paramormyrops_kingsleyae
ENSNBRG00000022690	trmu	91	71.274	ENSPSIG00000013020	TRMU	96	71.274	Pelodiscus_sinensis
ENSNBRG00000022690	trmu	100	83.654	ENSPMGG00000004083	trmu	100	83.654	Periophthalmus_magnuspinnatus
ENSNBRG00000022690	trmu	99	69.136	ENSPEMG00000014007	Trmu	97	69.136	Peromyscus_maniculatus_bairdii
ENSNBRG00000022690	trmu	96	67.179	ENSPCIG00000009923	TRMU	95	65.679	Phascolarctos_cinereus
ENSNBRG00000022690	trmu	96	85.897	ENSPFOG00000008197	trmu	90	84.406	Poecilia_formosa
ENSNBRG00000022690	trmu	99	89.000	ENSPLAG00000008414	trmu	99	87.440	Poecilia_latipinna
ENSNBRG00000022690	trmu	99	89.500	ENSPMEG00000004326	trmu	100	87.740	Poecilia_mexicana
ENSNBRG00000022690	trmu	99	89.250	ENSPREG00000007980	trmu	99	87.681	Poecilia_reticulata
ENSNBRG00000022690	trmu	99	70.864	ENSPPYG00000011949	TRMU	98	69.880	Pongo_abelii
ENSNBRG00000022690	trmu	93	63.492	ENSPCAG00000013462	TRMU	99	62.791	Procavia_capensis
ENSNBRG00000022690	trmu	100	68.966	ENSPCOG00000016539	TRMU	97	68.966	Propithecus_coquereli
ENSNBRG00000022690	trmu	99	64.938	ENSPVAG00000013202	TRMU	97	65.025	Pteropus_vampyrus
ENSNBRG00000022690	trmu	100	99.038	ENSPNYG00000005629	trmu	100	99.038	Pundamilia_nyererei
ENSNBRG00000022690	trmu	100	78.606	ENSPNAG00000006339	trmu	97	78.606	Pygocentrus_nattereri
ENSNBRG00000022690	trmu	99	68.642	ENSRNOG00000016465	Trmu	97	68.734	Rattus_norvegicus
ENSNBRG00000022690	trmu	98	69.598	ENSRBIG00000038973	TRMU	96	68.889	Rhinopithecus_bieti
ENSNBRG00000022690	trmu	98	69.849	ENSRROG00000004267	TRMU	96	69.136	Rhinopithecus_roxellana
ENSNBRG00000022690	trmu	96	33.172	YDL033C	SLM3	94	33.172	Saccharomyces_cerevisiae
ENSNBRG00000022690	trmu	98	70.101	ENSSBOG00000030184	TRMU	99	68.510	Saimiri_boliviensis_boliviensis
ENSNBRG00000022690	trmu	91	77.027	ENSSFOG00015020664	trmu	99	75.462	Scleropages_formosus
ENSNBRG00000022690	trmu	100	86.779	ENSSMAG00000019450	trmu	100	86.779	Scophthalmus_maximus
ENSNBRG00000022690	trmu	100	88.221	ENSSDUG00000011913	trmu	100	88.221	Seriola_dumerili
ENSNBRG00000022690	trmu	100	87.981	ENSSLDG00000011684	trmu	100	87.981	Seriola_lalandi_dorsalis
ENSNBRG00000022690	trmu	98	61.307	ENSSPUG00000017123	TRMU	96	59.709	Sphenodon_punctatus
ENSNBRG00000022690	trmu	100	86.058	ENSSPAG00000021875	trmu	100	86.058	Stegastes_partitus
ENSNBRG00000022690	trmu	100	69.951	ENSSSCG00000000007	TRMU	96	69.975	Sus_scrofa
ENSNBRG00000022690	trmu	91	73.387	ENSTGUG00000003663	-	100	73.458	Taeniopygia_guttata
ENSNBRG00000022690	trmu	99	85.149	ENSTRUG00000001231	trmu	100	84.746	Takifugu_rubripes
ENSNBRG00000022690	trmu	99	84.236	ENSTNIG00000010484	trmu	98	83.855	Tetraodon_nigroviridis
ENSNBRG00000022690	trmu	76	53.782	ENSTBEG00000011276	-	79	53.782	Tupaia_belangeri
ENSNBRG00000022690	trmu	100	70.690	ENSTTRG00000004160	TRMU	96	70.690	Tursiops_truncatus
ENSNBRG00000022690	trmu	72	72.509	ENSUAMG00000024825	TRMU	97	72.509	Ursus_americanus
ENSNBRG00000022690	trmu	100	57.882	ENSUMAG00000019079	TRMU	97	71.984	Ursus_maritimus
ENSNBRG00000022690	trmu	54	61.187	ENSVPAG00000000685	-	100	61.187	Vicugna_pacos
ENSNBRG00000022690	trmu	100	69.458	ENSVVUG00000024963	TRMU	96	69.458	Vulpes_vulpes
ENSNBRG00000022690	trmu	99	73.580	ENSXETG00000023304	trmu	95	73.580	Xenopus_tropicalis
ENSNBRG00000022690	trmu	99	87.345	ENSXCOG00000015105	trmu	99	85.851	Xiphophorus_couchianus
ENSNBRG00000022690	trmu	99	90.000	ENSXMAG00000006697	trmu	99	88.406	Xiphophorus_maculatus