EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000022789 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1856 bases
Position: chrJH422561.1:108599-110454
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000029948	zf-CCCH	PF00642.24	4.6e-30	1	4
ENSNBRP00000029948	zf-CCCH	PF00642.24	4.6e-30	2	4
ENSNBRP00000029948	zf-CCCH	PF00642.24	4.6e-30	3	4
ENSNBRP00000029948	zf-CCCH	PF00642.24	4.6e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030711	-	795	-	ENSNBRP00000029948	264 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000022789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022789	cth1	77	63.598	ENSAPOG00000012552	cth1	84	63.598	Acanthochromis_polyacanthus
ENSNBRG00000022789	cth1	88	71.014	ENSACIG00000016026	cth1	88	73.188	Amphilophus_citrinellus
ENSNBRG00000022789	cth1	88	64.599	ENSAOCG00000001644	cth1	88	64.469	Amphiprion_ocellaris
ENSNBRG00000022789	cth1	88	64.599	ENSAPEG00000008930	cth1	88	64.469	Amphiprion_percula
ENSNBRG00000022789	cth1	87	62.329	ENSATEG00000002281	cth1	86	62.587	Anabas_testudineus
ENSNBRG00000022789	cth1	82	84.959	ENSACLG00000015353	cth1	89	84.959	Astatotilapia_calliptera
ENSNBRG00000022789	cth1	83	57.455	ENSAMXG00000025717	cth1	58	68.681	Astyanax_mexicanus
ENSNBRG00000022789	cth1	88	62.324	ENSCSEG00000014617	cth1	88	61.620	Cynoglossus_semilaevis
ENSNBRG00000022789	cth1	94	57.092	ENSCVAG00000001680	cth1	59	57.091	Cyprinodon_variegatus
ENSNBRG00000022789	cth1	77	57.647	ENSDARG00000057328	cth1	90	56.993	Danio_rerio
ENSNBRG00000022789	cth1	88	54.153	ENSELUG00000012738	cth1	89	51.827	Esox_lucius
ENSNBRG00000022789	cth1	88	55.396	ENSFHEG00000022665	cth1	88	54.545	Fundulus_heteroclitus
ENSNBRG00000022789	cth1	88	60.949	ENSGMOG00000007360	cth1	89	59.559	Gadus_morhua
ENSNBRG00000022789	cth1	88	55.594	ENSGAFG00000019288	cth1	89	55.872	Gambusia_affinis
ENSNBRG00000022789	cth1	88	61.338	ENSGACG00000000802	cth1	88	61.049	Gasterosteus_aculeatus
ENSNBRG00000022789	cth1	88	85.824	ENSHBUG00000014400	cth1	88	85.824	Haplochromis_burtoni
ENSNBRG00000022789	cth1	86	54.878	ENSHCOG00000010276	cth1	86	53.846	Hippocampus_comes
ENSNBRG00000022789	cth1	86	56.643	ENSIPUG00000018040	cth1	92	56.122	Ictalurus_punctatus
ENSNBRG00000022789	cth1	99	54.000	ENSKMAG00000005944	cth1	100	54.000	Kryptolebias_marmoratus
ENSNBRG00000022789	cth1	88	62.278	ENSLBEG00000019253	cth1	89	62.143	Labrus_bergylta
ENSNBRG00000022789	cth1	65	57.143	ENSLOCG00000002047	cth1	82	58.385	Lepisosteus_oculatus
ENSNBRG00000022789	cth1	65	60.096	ENSMAMG00000001525	cth1	56	60.096	Mastacembelus_armatus
ENSNBRG00000022789	cth1	88	85.441	ENSMZEG00005022335	cth1	88	85.441	Maylandia_zebra
ENSNBRG00000022789	cth1	88	64.561	ENSMMOG00000020518	cth1	95	63.380	Mola_mola
ENSNBRG00000022789	cth1	88	82.836	ENSONIG00000021318	cth1	89	82.836	Oreochromis_niloticus
ENSNBRG00000022789	cth1	88	59.398	ENSORLG00000022847	cth1	89	60.150	Oryzias_latipes
ENSNBRG00000022789	cth1	88	60.223	ENSORLG00020011979	cth1	89	60.300	Oryzias_latipes_hni
ENSNBRG00000022789	cth1	80	59.836	ENSORLG00015013084	cth1	89	60.150	Oryzias_latipes_hsok
ENSNBRG00000022789	cth1	88	62.452	ENSOMEG00000005809	cth1	77	62.452	Oryzias_melastigma
ENSNBRG00000022789	cth1	90	52.448	ENSPKIG00000015883	cth1	92	50.000	Paramormyrops_kingsleyae
ENSNBRG00000022789	cth1	88	59.516	ENSPMGG00000004275	cth1	90	58.131	Periophthalmus_magnuspinnatus
ENSNBRG00000022789	cth1	88	58.303	ENSPFOG00000013583	cth1	82	59.701	Poecilia_formosa
ENSNBRG00000022789	cth1	88	58.303	ENSPLAG00000018158	cth1	82	59.701	Poecilia_latipinna
ENSNBRG00000022789	cth1	88	58.303	ENSPMEG00000005744	cth1	88	59.701	Poecilia_mexicana
ENSNBRG00000022789	cth1	88	58.647	ENSPREG00000004099	cth1	88	61.338	Poecilia_reticulata
ENSNBRG00000022789	cth1	85	91.266	ENSPNYG00000016705	cth1	88	91.266	Pundamilia_nyererei
ENSNBRG00000022789	cth1	95	53.896	ENSPNAG00000013147	cth1	94	53.268	Pygocentrus_nattereri
ENSNBRG00000022789	cth1	84	53.532	ENSSFOG00015017190	cth1	61	61.376	Scleropages_formosus
ENSNBRG00000022789	cth1	83	60.517	ENSSMAG00000007977	cth1	88	62.676	Scophthalmus_maximus
ENSNBRG00000022789	cth1	96	58.204	ENSSDUG00000004321	cth1	98	57.812	Seriola_dumerili
ENSNBRG00000022789	cth1	87	63.668	ENSSLDG00000012760	cth1	98	59.502	Seriola_lalandi_dorsalis
ENSNBRG00000022789	cth1	86	64.111	ENSSLDG00000010023	-	97	59.875	Seriola_lalandi_dorsalis
ENSNBRG00000022789	cth1	87	63.668	ENSSLDG00000004516	-	98	59.502	Seriola_lalandi_dorsalis
ENSNBRG00000022789	cth1	83	63.774	ENSSPAG00000018659	cth1	89	61.649	Stegastes_partitus
ENSNBRG00000022789	cth1	89	58.099	ENSTRUG00000012770	cth1	90	60.563	Takifugu_rubripes
ENSNBRG00000022789	cth1	96	57.097	ENSTNIG00000000740	cth1	100	54.890	Tetraodon_nigroviridis
ENSNBRG00000022789	cth1	81	63.801	ENSXCOG00000003710	cth1	82	62.439	Xiphophorus_couchianus
ENSNBRG00000022789	cth1	88	56.679	ENSXMAG00000023885	cth1	88	56.318	Xiphophorus_maculatus