EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000022885 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbfox3
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 70840 bases
Position: chrJH422354.1:181187-252026
Accession: 102785626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000030080	Fox-1_C	PF12414.8	4e-25	1	2
ENSNBRP00000030080	Fox-1_C	PF12414.8	4e-25	2	2
ENSNBRP00000030080	RRM_1	PF00076.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000030847	-	1020	XM_006801633	ENSNBRP00000030080	339 (aa)	XP_006801696	-

Gene Model

Click here to download ENSNBRG00000022885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000022885	-	60	61.538	ENSNBRG00000018155	rbfox2	75	50.546
ENSNBRG00000022885	-	99	49.873	ENSNBRG00000011084	rbfox1	92	48.346
ENSNBRG00000022885	-	60	65.198	ENSNBRG00000003346	rbfox1l	85	52.147
ENSNBRG00000022885	-	77	54.874	ENSNBRG00000001568	-	68	56.767
ENSNBRG00000022885	-	91	75.610	ENSNBRG00000010102	rbfox3b	90	75.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022885	-	77	93.103	ENSG00000167281	RBFOX3	100	73.482	Homo_sapiens
ENSNBRG00000022885	-	93	73.684	ENSAPOG00000015658	-	87	73.684	Acanthochromis_polyacanthus
ENSNBRG00000022885	-	92	75.224	ENSAPOG00000021630	rbfox3b	90	75.455	Acanthochromis_polyacanthus
ENSNBRG00000022885	-	96	63.684	ENSAMEG00000014170	RBFOX3	91	67.697	Ailuropoda_melanoleuca
ENSNBRG00000022885	-	86	79.868	ENSACIG00000010817	rbfox3b	100	80.066	Amphilophus_citrinellus
ENSNBRG00000022885	-	76	88.087	ENSACIG00000003768	-	78	88.087	Amphilophus_citrinellus
ENSNBRG00000022885	-	91	75.602	ENSAOCG00000012358	rbfox3b	90	75.758	Amphiprion_ocellaris
ENSNBRG00000022885	-	92	87.227	ENSAOCG00000010786	-	87	88.254	Amphiprion_ocellaris
ENSNBRG00000022885	-	91	82.493	ENSAPEG00000015891	-	87	82.985	Amphiprion_percula
ENSNBRG00000022885	-	90	78.317	ENSAPEG00000019081	rbfox3b	89	76.825	Amphiprion_percula
ENSNBRG00000022885	-	86	68.588	ENSATEG00000019945	rbfox3b	100	69.565	Anabas_testudineus
ENSNBRG00000022885	-	83	77.778	ENSATEG00000023101	-	98	78.505	Anabas_testudineus
ENSNBRG00000022885	-	91	72.673	ENSACAG00000016093	RBFOX3	92	72.673	Anolis_carolinensis
ENSNBRG00000022885	-	75	93.333	ENSANAG00000023457	RBFOX3	100	73.163	Aotus_nancymaae
ENSNBRG00000022885	-	92	75.904	ENSACLG00000020011	rbfox3b	100	76.452	Astatotilapia_calliptera
ENSNBRG00000022885	-	91	89.458	ENSACLG00000025552	-	90	89.458	Astatotilapia_calliptera
ENSNBRG00000022885	-	92	73.824	ENSAMXG00000037246	rbfox3a	98	77.273	Astyanax_mexicanus
ENSNBRG00000022885	-	91	71.471	ENSAMXG00000042841	rbfox3b	93	70.997	Astyanax_mexicanus
ENSNBRG00000022885	-	77	93.103	ENSBTAG00000006280	RBFOX3	76	93.333	Bos_taurus
ENSNBRG00000022885	-	78	93.333	ENSCJAG00000009563	RBFOX3	78	93.333	Callithrix_jacchus
ENSNBRG00000022885	-	66	78.926	ENSCAFG00000005547	RBFOX3	86	79.339	Canis_familiaris
ENSNBRG00000022885	-	78	93.333	ENSCAFG00020008126	RBFOX3	76	90.909	Canis_lupus_dingo
ENSNBRG00000022885	-	78	93.333	ENSCHIG00000009124	RBFOX3	76	90.909	Capra_hircus
ENSNBRG00000022885	-	77	93.103	ENSTSYG00000029617	RBFOX3	78	93.333	Carlito_syrichta
ENSNBRG00000022885	-	78	93.333	ENSCPOG00000021703	RBFOX3	78	93.333	Cavia_porcellus
ENSNBRG00000022885	-	75	93.333	ENSCCAG00000028450	RBFOX3	100	73.163	Cebus_capucinus
ENSNBRG00000022885	-	81	76.842	ENSCATG00000018349	RBFOX3	100	73.482	Cercocebus_atys
ENSNBRG00000022885	-	81	87.805	ENSCLAG00000006449	RBFOX3	78	93.333	Chinchilla_lanigera
ENSNBRG00000022885	-	81	72.148	ENSCSAG00000002355	RBFOX3	100	73.482	Chlorocebus_sabaeus
ENSNBRG00000022885	-	90	73.700	ENSCPBG00000010904	RBFOX3	100	74.121	Chrysemys_picta_bellii
ENSNBRG00000022885	-	78	90.625	ENSCANG00000043120	RBFOX3	100	73.482	Colobus_angolensis_palliatus
ENSNBRG00000022885	-	77	86.207	ENSCGRG00001019476	Rbfox3	78	86.667	Cricetulus_griseus_chok1gshd
ENSNBRG00000022885	-	77	86.207	ENSCGRG00000003268	Rbfox3	78	86.667	Cricetulus_griseus_crigri
ENSNBRG00000022885	-	96	83.082	ENSCSEG00000015567	RBFOX3	94	83.082	Cynoglossus_semilaevis
ENSNBRG00000022885	-	91	61.310	ENSCSEG00000020606	RBFOX3	90	60.843	Cynoglossus_semilaevis
ENSNBRG00000022885	-	91	75.602	ENSCVAG00000006882	rbfox3b	90	75.758	Cyprinodon_variegatus
ENSNBRG00000022885	-	91	74.481	ENSDARG00000010083	rbfox3a	99	77.879	Danio_rerio
ENSNBRG00000022885	-	86	73.064	ENSDARG00000074310	rbfox3b	96	72.542	Danio_rerio
ENSNBRG00000022885	-	63	93.103	ENSDNOG00000039391	RBFOX3	73	93.333	Dasypus_novemcinctus
ENSNBRG00000022885	-	78	87.805	ENSDORG00000005352	Rbfox3	80	77.273	Dipodomys_ordii
ENSNBRG00000022885	-	78	56.338	ENSEBUG00000013559	RBFOX3	74	57.143	Eptatretus_burgeri
ENSNBRG00000022885	-	90	62.209	ENSEBUG00000002129	RBFOX3	96	62.791	Eptatretus_burgeri
ENSNBRG00000022885	-	81	72.333	ENSEASG00005005059	RBFOX3	100	73.016	Equus_asinus_asinus
ENSNBRG00000022885	-	81	72.000	ENSECAG00000023811	RBFOX3	100	72.698	Equus_caballus
ENSNBRG00000022885	-	65	87.879	ENSEEUG00000013974	RBFOX3	65	87.879	Erinaceus_europaeus
ENSNBRG00000022885	-	92	75.000	ENSELUG00000017963	rbfox3b	100	66.346	Esox_lucius
ENSNBRG00000022885	-	91	71.386	ENSFCAG00000002555	RBFOX3	100	72.524	Felis_catus
ENSNBRG00000022885	-	91	58.402	ENSFALG00000012288	RBFOX3	89	60.163	Ficedula_albicollis
ENSNBRG00000022885	-	78	93.333	ENSFDAG00000007489	RBFOX3	76	93.333	Fukomys_damarensis
ENSNBRG00000022885	-	86	66.879	ENSFHEG00000008550	rbfox3b	100	66.987	Fundulus_heteroclitus
ENSNBRG00000022885	-	86	88.636	ENSGMOG00000019304	-	77	74.468	Gadus_morhua
ENSNBRG00000022885	-	91	73.952	ENSGALG00000032889	RBFOX3	92	74.174	Gallus_gallus
ENSNBRG00000022885	-	92	76.324	ENSGAFG00000005025	rbfox3b	89	76.176	Gambusia_affinis
ENSNBRG00000022885	-	76	93.939	ENSGACG00000002138	-	73	93.939	Gasterosteus_aculeatus
ENSNBRG00000022885	-	92	73.353	ENSGAGG00000020025	RBFOX3	100	74.441	Gopherus_agassizii
ENSNBRG00000022885	-	78	90.625	ENSGGOG00000012546	RBFOX3	100	73.482	Gorilla_gorilla
ENSNBRG00000022885	-	92	90.504	ENSHBUG00000023098	-	97	90.504	Haplochromis_burtoni
ENSNBRG00000022885	-	92	75.904	ENSHBUG00000018099	rbfox3b	90	76.453	Haplochromis_burtoni
ENSNBRG00000022885	-	78	93.333	ENSHGLG00000008679	RBFOX3	77	93.333	Heterocephalus_glaber_female
ENSNBRG00000022885	-	77	92.593	ENSHGLG00100014739	RBFOX3	74	89.655	Heterocephalus_glaber_male
ENSNBRG00000022885	-	91	79.935	ENSHCOG00000001863	RBFOX3	98	79.935	Hippocampus_comes
ENSNBRG00000022885	-	82	71.761	ENSHCOG00000007444	RBFOX3	86	67.470	Hippocampus_comes
ENSNBRG00000022885	-	86	65.443	ENSIPUG00000021966	rbfox3b	94	75.600	Ictalurus_punctatus
ENSNBRG00000022885	-	91	72.700	ENSIPUG00000012010	rbfox3a	98	75.380	Ictalurus_punctatus
ENSNBRG00000022885	-	82	61.644	ENSSTOG00000026817	RBFOX3	100	63.211	Ictidomys_tridecemlineatus
ENSNBRG00000022885	-	77	93.103	ENSJJAG00000014167	Rbfox3	78	93.333	Jaculus_jaculus
ENSNBRG00000022885	-	92	78.438	ENSKMAG00000006726	rbfox3b	89	79.245	Kryptolebias_marmoratus
ENSNBRG00000022885	-	91	82.831	ENSLBEG00000022508	-	90	82.831	Labrus_bergylta
ENSNBRG00000022885	-	92	75.224	ENSLBEG00000004030	rbfox3b	100	79.734	Labrus_bergylta
ENSNBRG00000022885	-	53	58.696	ENSLACG00000000021	-	95	59.783	Latimeria_chalumnae
ENSNBRG00000022885	-	89	67.887	ENSLACG00000018409	-	90	69.296	Latimeria_chalumnae
ENSNBRG00000022885	-	89	77.914	ENSLOCG00000012267	rbfox3a	98	80.368	Lepisosteus_oculatus
ENSNBRG00000022885	-	78	90.625	ENSLAFG00000016623	RBFOX3	76	90.909	Loxodonta_africana
ENSNBRG00000022885	-	77	93.103	ENSMFAG00000002247	RBFOX3	78	93.333	Macaca_fascicularis
ENSNBRG00000022885	-	74	93.103	ENSMMUG00000023028	RBFOX3	100	73.482	Macaca_mulatta
ENSNBRG00000022885	-	81	71.812	ENSMNEG00000041147	RBFOX3	100	73.163	Macaca_nemestrina
ENSNBRG00000022885	-	81	72.148	ENSMLEG00000025686	RBFOX3	100	73.482	Mandrillus_leucophaeus
ENSNBRG00000022885	-	86	77.926	ENSMAMG00000019810	rbfox3b	100	77.778	Mastacembelus_armatus
ENSNBRG00000022885	-	90	83.282	ENSMAMG00000020600	-	94	83.282	Mastacembelus_armatus
ENSNBRG00000022885	-	75	82.230	ENSMZEG00005003055	-	87	77.889	Maylandia_zebra
ENSNBRG00000022885	-	92	75.904	ENSMZEG00005000781	rbfox3b	90	76.147	Maylandia_zebra
ENSNBRG00000022885	-	64	77.027	ENSMGAG00000005600	RBFOX3	83	77.928	Meleagris_gallopavo
ENSNBRG00000022885	-	82	79.545	ENSMAUG00000013543	Rbfox3	78	86.667	Mesocricetus_auratus
ENSNBRG00000022885	-	83	90.625	ENSMICG00000014898	RBFOX3	100	73.077	Microcebus_murinus
ENSNBRG00000022885	-	77	86.207	ENSMOCG00000015373	Rbfox3	78	86.667	Microtus_ochrogaster
ENSNBRG00000022885	-	91	76.947	ENSMMOG00000020193	rbfox3b	89	76.636	Mola_mola
ENSNBRG00000022885	-	91	71.471	ENSMODG00000002089	RBFOX3	92	72.372	Monodelphis_domestica
ENSNBRG00000022885	-	91	74.699	ENSMALG00000020407	rbfox3b	90	75.455	Monopterus_albus
ENSNBRG00000022885	-	92	81.194	ENSMALG00000018270	-	97	84.539	Monopterus_albus
ENSNBRG00000022885	-	77	86.207	MGP_CAROLIEiJ_G0017487	Rbfox3	92	90.299	Mus_caroli
ENSNBRG00000022885	-	78	90.000	ENSMUSG00000025576	Rbfox3	92	90.299	Mus_musculus
ENSNBRG00000022885	-	77	89.655	MGP_PahariEiJ_G0018614	Rbfox3	92	91.045	Mus_pahari
ENSNBRG00000022885	-	77	89.655	MGP_SPRETEiJ_G0018331	Rbfox3	92	90.299	Mus_spretus
ENSNBRG00000022885	-	92	65.591	ENSMPUG00000012319	RBFOX3	97	65.860	Mustela_putorius_furo
ENSNBRG00000022885	-	77	89.655	ENSNGAG00000018006	Rbfox3	78	90.000	Nannospalax_galili
ENSNBRG00000022885	-	86	57.627	ENSNLEG00000000153	-	96	56.949	Nomascus_leucogenys
ENSNBRG00000022885	-	78	90.000	ENSMEUG00000004218	-	78	90.000	Notamacropus_eugenii
ENSNBRG00000022885	-	67	72.775	ENSOPRG00000016279	-	67	72.775	Ochotona_princeps
ENSNBRG00000022885	-	82	86.364	ENSODEG00000009433	RBFOX3	100	74.051	Octodon_degus
ENSNBRG00000022885	-	91	75.602	ENSONIG00000009549	rbfox3b	90	75.758	Oreochromis_niloticus
ENSNBRG00000022885	-	91	86.006	ENSONIG00000007282	-	100	86.006	Oreochromis_niloticus
ENSNBRG00000022885	-	91	76.205	ENSORLG00000000905	rbfox3b	71	74.924	Oryzias_latipes
ENSNBRG00000022885	-	91	76.205	ENSORLG00020018030	rbfox3b	98	67.183	Oryzias_latipes_hni
ENSNBRG00000022885	-	91	75.904	ENSORLG00015009200	rbfox3b	100	68.013	Oryzias_latipes_hsok
ENSNBRG00000022885	-	75	74.545	ENSOMEG00000014677	rbfox3b	75	74.913	Oryzias_melastigma
ENSNBRG00000022885	-	91	69.970	ENSOGAG00000029595	RBFOX3	88	70.871	Otolemur_garnettii
ENSNBRG00000022885	-	65	62.996	ENSOARG00000002908	RBFOX3	89	54.023	Ovis_aries
ENSNBRG00000022885	-	69	78.481	ENSPPAG00000025383	RBFOX3	88	78.571	Pan_paniscus
ENSNBRG00000022885	-	77	86.207	ENSPPRG00000007819	RBFOX3	80	86.667	Panthera_pardus
ENSNBRG00000022885	-	78	90.625	ENSPTRG00000009727	RBFOX3	100	73.482	Pan_troglodytes
ENSNBRG00000022885	-	81	72.148	ENSPANG00000019837	RBFOX3	100	73.482	Papio_anubis
ENSNBRG00000022885	-	97	75.362	ENSPKIG00000010299	rbfox3a	91	76.676	Paramormyrops_kingsleyae
ENSNBRG00000022885	-	90	62.997	ENSPKIG00000022633	-	89	62.462	Paramormyrops_kingsleyae
ENSNBRG00000022885	-	82	75.177	ENSPMGG00000008000	rbfox3b	84	79.926	Periophthalmus_magnuspinnatus
ENSNBRG00000022885	-	77	86.207	ENSPEMG00000010500	Rbfox3	78	86.667	Peromyscus_maniculatus_bairdii
ENSNBRG00000022885	-	88	87.879	ENSPCIG00000005766	RBFOX3	78	90.000	Phascolarctos_cinereus
ENSNBRG00000022885	-	83	86.364	ENSPFOG00000018294	rbfox3b	87	75.676	Poecilia_formosa
ENSNBRG00000022885	-	67	85.897	ENSPLAG00000000481	rbfox3b	75	86.522	Poecilia_latipinna
ENSNBRG00000022885	-	86	66.879	ENSPMEG00000022997	rbfox3b	100	66.987	Poecilia_mexicana
ENSNBRG00000022885	-	92	75.000	ENSPREG00000012886	rbfox3b	95	75.301	Poecilia_reticulata
ENSNBRG00000022885	-	77	71.591	ENSPPYG00000008704	RBFOX3	77	71.591	Pongo_abelii
ENSNBRG00000022885	-	77	86.207	ENSPCAG00000001401	RBFOX3	78	86.667	Procavia_capensis
ENSNBRG00000022885	-	82	93.333	ENSPCOG00000012689	RBFOX3	78	93.333	Propithecus_coquereli
ENSNBRG00000022885	-	77	86.207	ENSPVAG00000015243	RBFOX3	78	86.667	Pteropus_vampyrus
ENSNBRG00000022885	-	90	97.078	ENSPNYG00000009079	-	85	97.078	Pundamilia_nyererei
ENSNBRG00000022885	-	90	75.728	ENSPNYG00000010414	rbfox3b	88	75.325	Pundamilia_nyererei
ENSNBRG00000022885	-	75	96.970	ENSPNAG00000002889	rbfox3a	74	97.059	Pygocentrus_nattereri
ENSNBRG00000022885	-	90	64.516	ENSPNAG00000018173	rbfox3b	95	64.379	Pygocentrus_nattereri
ENSNBRG00000022885	-	78	87.500	ENSRNOG00000003386	Rbfox3	100	72.555	Rattus_norvegicus
ENSNBRG00000022885	-	91	71.687	ENSRBIG00000040449	RBFOX3	92	72.590	Rhinopithecus_bieti
ENSNBRG00000022885	-	81	72.148	ENSRROG00000000766	RBFOX3	100	73.482	Rhinopithecus_roxellana
ENSNBRG00000022885	-	77	93.103	ENSSBOG00000031591	RBFOX3	100	73.163	Saimiri_boliviensis_boliviensis
ENSNBRG00000022885	-	90	65.651	ENSSHAG00000016076	RBFOX3	100	63.376	Sarcophilus_harrisii
ENSNBRG00000022885	-	91	77.381	ENSSFOG00015023260	rbfox3a	90	79.279	Scleropages_formosus
ENSNBRG00000022885	-	89	65.741	ENSSFOG00015004716	RBFOX3	92	67.391	Scleropages_formosus
ENSNBRG00000022885	-	91	79.819	ENSSMAG00000019052	-	100	79.872	Scophthalmus_maximus
ENSNBRG00000022885	-	91	71.633	ENSSMAG00000012618	rbfox3b	79	71.470	Scophthalmus_maximus
ENSNBRG00000022885	-	92	84.277	ENSSDUG00000015801	-	89	84.494	Seriola_dumerili
ENSNBRG00000022885	-	86	66.879	ENSSDUG00000023183	rbfox3b	100	66.987	Seriola_dumerili
ENSNBRG00000022885	-	91	75.602	ENSSLDG00000000149	rbfox3b	90	75.758	Seriola_lalandi_dorsalis
ENSNBRG00000022885	-	92	86.335	ENSSLDG00000016098	-	89	86.335	Seriola_lalandi_dorsalis
ENSNBRG00000022885	-	91	64.350	ENSSPUG00000011733	RBFOX3	99	74.841	Sphenodon_punctatus
ENSNBRG00000022885	-	92	74.143	ENSSPAG00000017571	rbfox3b	89	74.295	Stegastes_partitus
ENSNBRG00000022885	-	73	75.556	ENSSPAG00000004898	-	74	81.600	Stegastes_partitus
ENSNBRG00000022885	-	70	90.625	ENSSSCG00000039498	RBFOX3	73	90.909	Sus_scrofa
ENSNBRG00000022885	-	90	72.997	ENSTRUG00000004894	rbfox3b	94	71.810	Takifugu_rubripes
ENSNBRG00000022885	-	96	64.491	ENSTNIG00000011278	rbfox3b	95	64.567	Tetraodon_nigroviridis
ENSNBRG00000022885	-	77	93.103	ENSTTRG00000003676	RBFOX3	78	93.333	Tursiops_truncatus
ENSNBRG00000022885	-	81	71.477	ENSUAMG00000004668	RBFOX3	100	72.843	Ursus_americanus
ENSNBRG00000022885	-	87	93.103	ENSVVUG00000017864	RBFOX3	100	73.163	Vulpes_vulpes
ENSNBRG00000022885	-	90	58.239	ENSXETG00000020236	rbfox3	93	57.568	Xenopus_tropicalis
ENSNBRG00000022885	-	91	75.000	ENSXCOG00000018262	rbfox3b	100	79.125	Xiphophorus_couchianus
ENSNBRG00000022885	-	92	75.224	ENSXMAG00000012939	rbfox3b	90	75.758	Xiphophorus_maculatus