EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000022968 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: protein strawberry notch homolog 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 42535 bases
Position: chrJH422344.1:92876-135410
Accession: 102798063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000030344	ResIII	PF04851.15	2.4e-07	1	1
ENSNBRP00000030317	ResIII	PF04851.15	7.3e-07	1	1
ENSNBRP00000030300	ResIII	PF04851.15	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031089	-	3393	-	ENSNBRP00000030317	1131 (aa)	-	-
ENSNBRT00000031121	-	2658	-	ENSNBRP00000030344	885 (aa)	-	-
ENSNBRT00000031072	-	3642	XM_006800375	ENSNBRP00000030300	1213 (aa)	XP_006800438	-

Gene Model

Click here to download ENSNBRG00000022968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000022968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000022968	si:ch73-63e15.2	88	63.532	ENSNBRG00000019189	sbno1	73	62.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000022968	si:ch73-63e15.2	96	72.292	ENSG00000064932	SBNO2	84	67.296	Homo_sapiens
ENSNBRG00000022968	si:ch73-63e15.2	99	90.888	ENSAPOG00000003185	si:ch73-63e15.2	93	82.422	Acanthochromis_polyacanthus
ENSNBRG00000022968	si:ch73-63e15.2	99	91.238	ENSAOCG00000016581	si:ch73-63e15.2	98	89.815	Amphiprion_ocellaris
ENSNBRG00000022968	si:ch73-63e15.2	99	91.238	ENSAPEG00000008862	si:ch73-63e15.2	81	90.437	Amphiprion_percula
ENSNBRG00000022968	si:ch73-63e15.2	99	90.877	ENSATEG00000023838	si:ch73-63e15.2	99	82.197	Anabas_testudineus
ENSNBRG00000022968	si:ch73-63e15.2	93	75.146	ENSAPLG00000007158	SBNO2	87	71.097	Anas_platyrhynchos
ENSNBRG00000022968	si:ch73-63e15.2	93	72.418	ENSANAG00000026685	SBNO2	85	67.174	Aotus_nancymaae
ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	ENSACLG00000005090	si:ch73-63e15.2	77	98.319	Astatotilapia_calliptera
ENSNBRG00000022968	si:ch73-63e15.2	93	84.856	ENSAMXG00000018868	sbno2a	95	78.601	Astyanax_mexicanus
ENSNBRG00000022968	si:ch73-63e15.2	97	85.234	ENSAMXG00000015881	si:ch73-63e15.2	80	81.096	Astyanax_mexicanus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.919	ENSBTAG00000020780	SBNO2	84	68.677	Bos_taurus
ENSNBRG00000022968	si:ch73-63e15.2	98	71.365	ENSCAFG00000019543	SBNO2	80	68.795	Canis_familiaris
ENSNBRG00000022968	si:ch73-63e15.2	98	71.365	ENSCAFG00020017115	SBNO2	85	68.795	Canis_lupus_dingo
ENSNBRG00000022968	si:ch73-63e15.2	93	72.919	ENSCHIG00000026127	SBNO2	82	68.468	Capra_hircus
ENSNBRG00000022968	si:ch73-63e15.2	97	70.787	ENSCAPG00000005731	SBNO2	91	66.186	Cavia_aperea
ENSNBRG00000022968	si:ch73-63e15.2	93	72.268	ENSCPOG00000007477	SBNO2	83	66.186	Cavia_porcellus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.535	ENSCCAG00000037518	SBNO2	86	66.876	Cebus_capucinus
ENSNBRG00000022968	si:ch73-63e15.2	96	72.437	ENSCATG00000037046	SBNO2	84	67.385	Cercocebus_atys
ENSNBRG00000022968	si:ch73-63e15.2	97	71.685	ENSCLAG00000010178	SBNO2	95	67.783	Chinchilla_lanigera
ENSNBRG00000022968	si:ch73-63e15.2	96	72.323	ENSCSAG00000012317	SBNO2	81	67.296	Chlorocebus_sabaeus
ENSNBRG00000022968	si:ch73-63e15.2	93	76.331	ENSCPBG00000008920	SBNO2	79	81.179	Chrysemys_picta_bellii
ENSNBRG00000022968	si:ch73-63e15.2	96	71.801	ENSCANG00000036745	SBNO2	95	66.788	Colobus_angolensis_palliatus
ENSNBRG00000022968	si:ch73-63e15.2	88	73.555	ENSCGRG00001023960	Sbno2	82	65.588	Cricetulus_griseus_chok1gshd
ENSNBRG00000022968	si:ch73-63e15.2	92	73.373	ENSCGRG00000011984	Sbno2	82	66.996	Cricetulus_griseus_crigri
ENSNBRG00000022968	si:ch73-63e15.2	93	87.981	ENSCSEG00000006856	si:ch73-63e15.2	95	85.622	Cynoglossus_semilaevis
ENSNBRG00000022968	si:ch73-63e15.2	99	89.744	ENSCVAG00000005663	si:ch73-63e15.2	81	87.364	Cyprinodon_variegatus
ENSNBRG00000022968	si:ch73-63e15.2	93	84.375	ENSDARG00000098801	sbno2a	81	78.442	Danio_rerio
ENSNBRG00000022968	si:ch73-63e15.2	93	86.315	ENSDARG00000016188	SBNO2	78	81.005	Danio_rerio
ENSNBRG00000022968	si:ch73-63e15.2	93	73.122	ENSDORG00000002916	Sbno2	81	68.108	Dipodomys_ordii
ENSNBRG00000022968	si:ch73-63e15.2	93	72.770	ENSEASG00005021621	SBNO2	85	68.468	Equus_asinus_asinus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.770	ENSECAG00000011827	SBNO2	85	68.559	Equus_caballus
ENSNBRG00000022968	si:ch73-63e15.2	99	87.981	ENSELUG00000020457	si:ch73-63e15.2	75	85.428	Esox_lucius
ENSNBRG00000022968	si:ch73-63e15.2	92	74.706	ENSFALG00000013988	SBNO2	81	70.520	Ficedula_albicollis
ENSNBRG00000022968	si:ch73-63e15.2	93	70.388	ENSFDAG00000015186	SBNO2	84	66.126	Fukomys_damarensis
ENSNBRG00000022968	si:ch73-63e15.2	99	89.327	ENSFHEG00000022262	si:ch73-63e15.2	80	87.978	Fundulus_heteroclitus
ENSNBRG00000022968	si:ch73-63e15.2	96	86.705	ENSGMOG00000007542	si:ch73-63e15.2	91	84.840	Gadus_morhua
ENSNBRG00000022968	si:ch73-63e15.2	93	75.029	ENSGALG00000037522	SBNO2	81	71.799	Gallus_gallus
ENSNBRG00000022968	si:ch73-63e15.2	98	90.876	ENSGAFG00000004860	si:ch73-63e15.2	87	88.241	Gambusia_affinis
ENSNBRG00000022968	si:ch73-63e15.2	95	87.889	ENSGACG00000013190	si:ch73-63e15.2	92	85.779	Gasterosteus_aculeatus
ENSNBRG00000022968	si:ch73-63e15.2	98	73.119	ENSGAGG00000008348	SBNO2	82	71.928	Gopherus_agassizii
ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	ENSHBUG00000010742	si:ch73-63e15.2	81	97.479	Haplochromis_burtoni
ENSNBRG00000022968	si:ch73-63e15.2	93	72.973	ENSHGLG00000008739	SBNO2	81	67.687	Heterocephalus_glaber_female
ENSNBRG00000022968	si:ch73-63e15.2	93	72.973	ENSHGLG00100005269	SBNO2	95	67.687	Heterocephalus_glaber_male
ENSNBRG00000022968	si:ch73-63e15.2	96	90.756	ENSHCOG00000000884	si:ch73-63e15.2	95	79.450	Hippocampus_comes
ENSNBRG00000022968	si:ch73-63e15.2	93	84.940	ENSIPUG00000019672	sbno2	92	79.219	Ictalurus_punctatus
ENSNBRG00000022968	si:ch73-63e15.2	96	82.778	ENSIPUG00000000537	si:ch73-63e15.2	80	80.365	Ictalurus_punctatus
ENSNBRG00000022968	si:ch73-63e15.2	92	72.609	ENSSTOG00000025832	SBNO2	81	67.892	Ictidomys_tridecemlineatus
ENSNBRG00000022968	si:ch73-63e15.2	99	66.995	ENSJJAG00000017397	Sbno2	82	64.991	Jaculus_jaculus
ENSNBRG00000022968	si:ch73-63e15.2	99	89.215	ENSKMAG00000005541	si:ch73-63e15.2	81	87.420	Kryptolebias_marmoratus
ENSNBRG00000022968	si:ch73-63e15.2	61	84.248	ENSLBEG00000005937	-	100	80.635	Labrus_bergylta
ENSNBRG00000022968	si:ch73-63e15.2	99	90.625	ENSLBEG00000025016	si:ch73-63e15.2	99	82.777	Labrus_bergylta
ENSNBRG00000022968	si:ch73-63e15.2	61	75.993	ENSLACG00000012598	SBNO2	97	70.805	Latimeria_chalumnae
ENSNBRG00000022968	si:ch73-63e15.2	96	85.814	ENSLOCG00000004643	si:ch73-63e15.2	81	83.942	Lepisosteus_oculatus
ENSNBRG00000022968	si:ch73-63e15.2	97	70.316	ENSLAFG00000008824	SBNO2	86	64.499	Loxodonta_africana
ENSNBRG00000022968	si:ch73-63e15.2	96	70.148	ENSMFAG00000040030	SBNO2	86	66.097	Macaca_fascicularis
ENSNBRG00000022968	si:ch73-63e15.2	96	72.323	ENSMMUG00000010886	SBNO2	84	66.097	Macaca_mulatta
ENSNBRG00000022968	si:ch73-63e15.2	96	72.323	ENSMNEG00000039927	SBNO2	84	67.206	Macaca_nemestrina
ENSNBRG00000022968	si:ch73-63e15.2	96	72.323	ENSMLEG00000038556	SBNO2	89	67.678	Mandrillus_leucophaeus
ENSNBRG00000022968	si:ch73-63e15.2	99	90.643	ENSMAMG00000018758	si:ch73-63e15.2	81	89.608	Mastacembelus_armatus
ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	ENSMZEG00005010682	si:ch73-63e15.2	77	98.319	Maylandia_zebra
ENSNBRG00000022968	si:ch73-63e15.2	93	74.912	ENSMGAG00000003801	SBNO2	86	71.071	Meleagris_gallopavo
ENSNBRG00000022968	si:ch73-63e15.2	92	72.609	ENSMAUG00000008034	Sbno2	82	67.145	Mesocricetus_auratus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.770	ENSMICG00000013071	SBNO2	84	67.477	Microcebus_murinus
ENSNBRG00000022968	si:ch73-63e15.2	92	73.491	ENSMOCG00000010504	Sbno2	82	67.175	Microtus_ochrogaster
ENSNBRG00000022968	si:ch73-63e15.2	97	73.761	ENSMODG00000005382	SBNO2	78	70.270	Monodelphis_domestica
ENSNBRG00000022968	si:ch73-63e15.2	99	77.825	ENSMALG00000021831	si:ch73-63e15.2	99	77.825	Monopterus_albus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.418	ENSMUSG00000035673	Sbno2	90	67.026	Mus_musculus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.653	MGP_PahariEiJ_G0030976	Sbno2	82	66.936	Mus_pahari
ENSNBRG00000022968	si:ch73-63e15.2	93	72.653	MGP_SPRETEiJ_G0016381	Sbno2	87	66.936	Mus_spretus
ENSNBRG00000022968	si:ch73-63e15.2	98	71.365	ENSMPUG00000008747	SBNO2	90	70.061	Mustela_putorius_furo
ENSNBRG00000022968	si:ch73-63e15.2	99	70.524	ENSNGAG00000004308	Sbno2	83	66.907	Nannospalax_galili
ENSNBRG00000022968	si:ch73-63e15.2	88	71.915	ENSNLEG00000001305	SBNO2	83	68.123	Nomascus_leucogenys
ENSNBRG00000022968	si:ch73-63e15.2	85	66.412	ENSMEUG00000013511	-	72	75.174	Notamacropus_eugenii
ENSNBRG00000022968	si:ch73-63e15.2	93	72.066	ENSOPRG00000017238	SBNO2	90	67.509	Ochotona_princeps
ENSNBRG00000022968	si:ch73-63e15.2	93	71.429	ENSODEG00000011822	SBNO2	82	66.517	Octodon_degus
ENSNBRG00000022968	si:ch73-63e15.2	99	98.361	ENSONIG00000002490	si:ch73-63e15.2	88	96.757	Oreochromis_niloticus
ENSNBRG00000022968	si:ch73-63e15.2	99	88.660	ENSORLG00000000913	si:ch73-63e15.2	78	87.931	Oryzias_latipes
ENSNBRG00000022968	si:ch73-63e15.2	99	88.660	ENSORLG00020010978	si:ch73-63e15.2	82	87.931	Oryzias_latipes_hni
ENSNBRG00000022968	si:ch73-63e15.2	99	88.660	ENSORLG00015000202	si:ch73-63e15.2	82	88.123	Oryzias_latipes_hsok
ENSNBRG00000022968	si:ch73-63e15.2	99	89.595	ENSOMEG00000000359	si:ch73-63e15.2	78	88.054	Oryzias_melastigma
ENSNBRG00000022968	si:ch73-63e15.2	93	71.747	ENSOARG00000011130	SBNO2	82	67.278	Ovis_aries
ENSNBRG00000022968	si:ch73-63e15.2	96	72.178	ENSPPAG00000032482	SBNO2	86	66.816	Pan_paniscus
ENSNBRG00000022968	si:ch73-63e15.2	96	72.292	ENSPTRG00000010185	SBNO2	84	67.296	Pan_troglodytes
ENSNBRG00000022968	si:ch73-63e15.2	96	67.882	ENSPANG00000009658	SBNO2	84	63.792	Papio_anubis
ENSNBRG00000022968	si:ch73-63e15.2	95	80.626	ENSPKIG00000009707	-	84	77.653	Paramormyrops_kingsleyae
ENSNBRG00000022968	si:ch73-63e15.2	93	86.988	ENSPKIG00000024201	si:ch73-63e15.2	79	81.901	Paramormyrops_kingsleyae
ENSNBRG00000022968	si:ch73-63e15.2	93	74.679	ENSPSIG00000002852	SBNO2	99	71.530	Pelodiscus_sinensis
ENSNBRG00000022968	si:ch73-63e15.2	97	87.981	ENSPMGG00000014375	si:ch73-63e15.2	95	77.441	Periophthalmus_magnuspinnatus
ENSNBRG00000022968	si:ch73-63e15.2	93	70.283	ENSPEMG00000024122	Sbno2	71	77.652	Peromyscus_maniculatus_bairdii
ENSNBRG00000022968	si:ch73-63e15.2	97	73.761	ENSPCIG00000011264	SBNO2	79	70.360	Phascolarctos_cinereus
ENSNBRG00000022968	si:ch73-63e15.2	99	89.261	ENSPFOG00000004096	si:ch73-63e15.2	96	84.919	Poecilia_formosa
ENSNBRG00000022968	si:ch73-63e15.2	99	87.862	ENSPLAG00000014653	si:ch73-63e15.2	81	88.332	Poecilia_latipinna
ENSNBRG00000022968	si:ch73-63e15.2	99	89.145	ENSPMEG00000002129	si:ch73-63e15.2	90	86.752	Poecilia_mexicana
ENSNBRG00000022968	si:ch73-63e15.2	99	89.261	ENSPREG00000006755	si:ch73-63e15.2	77	88.514	Poecilia_reticulata
ENSNBRG00000022968	si:ch73-63e15.2	96	69.625	ENSPCAG00000012256	SBNO2	77	67.115	Procavia_capensis
ENSNBRG00000022968	si:ch73-63e15.2	93	64.671	ENSPCOG00000015216	SBNO2	84	61.337	Propithecus_coquereli
ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	ENSPNYG00000019926	si:ch73-63e15.2	81	99.160	Pundamilia_nyererei
ENSNBRG00000022968	si:ch73-63e15.2	97	85.954	ENSPNAG00000020260	si:ch73-63e15.2	79	82.466	Pygocentrus_nattereri
ENSNBRG00000022968	si:ch73-63e15.2	95	83.587	ENSPNAG00000026609	sbno2a	87	77.537	Pygocentrus_nattereri
ENSNBRG00000022968	si:ch73-63e15.2	93	72.418	ENSRNOG00000013987	Sbno2	86	67.145	Rattus_norvegicus
ENSNBRG00000022968	si:ch73-63e15.2	93	71.864	ENSRBIG00000009740	SBNO2	85	66.000	Rhinopithecus_bieti
ENSNBRG00000022968	si:ch73-63e15.2	81	75.204	ENSRROG00000044671	SBNO2	81	69.693	Rhinopithecus_roxellana
ENSNBRG00000022968	si:ch73-63e15.2	93	72.300	ENSSBOG00000023562	SBNO2	85	66.428	Saimiri_boliviensis_boliviensis
ENSNBRG00000022968	si:ch73-63e15.2	93	75.235	ENSSHAG00000010241	SBNO2	95	69.884	Sarcophilus_harrisii
ENSNBRG00000022968	si:ch73-63e15.2	93	84.856	ENSSFOG00015005861	si:ch73-63e15.2	89	82.310	Scleropages_formosus
ENSNBRG00000022968	si:ch73-63e15.2	99	89.312	ENSSMAG00000012489	si:ch73-63e15.2	80	89.152	Scophthalmus_maximus
ENSNBRG00000022968	si:ch73-63e15.2	99	90.390	ENSSDUG00000003527	si:ch73-63e15.2	80	90.693	Seriola_dumerili
ENSNBRG00000022968	si:ch73-63e15.2	99	90.994	ENSSLDG00000004623	si:ch73-63e15.2	80	90.328	Seriola_lalandi_dorsalis
ENSNBRG00000022968	si:ch73-63e15.2	99	90.217	ENSSPAG00000017717	si:ch73-63e15.2	80	90.064	Stegastes_partitus
ENSNBRG00000022968	si:ch73-63e15.2	93	72.919	ENSSSCG00000030042	SBNO2	86	68.108	Sus_scrofa
ENSNBRG00000022968	si:ch73-63e15.2	95	89.382	ENSTRUG00000018193	si:ch73-63e15.2	85	86.248	Takifugu_rubripes
ENSNBRG00000022968	si:ch73-63e15.2	58	90.234	ENSTNIG00000000856	si:ch73-63e15.2	93	91.803	Tetraodon_nigroviridis
ENSNBRG00000022968	si:ch73-63e15.2	93	75.180	ENSUAMG00000006568	SBNO2	93	70.034	Ursus_americanus
ENSNBRG00000022968	si:ch73-63e15.2	98	71.365	ENSVVUG00000022823	SBNO2	79	68.587	Vulpes_vulpes
ENSNBRG00000022968	si:ch73-63e15.2	93	75.506	ENSXETG00000021579	sbno2	90	72.379	Xenopus_tropicalis
ENSNBRG00000022968	si:ch73-63e15.2	99	86.378	ENSXCOG00000009209	si:ch73-63e15.2	94	86.378	Xiphophorus_couchianus
ENSNBRG00000022968	si:ch73-63e15.2	99	89.030	ENSXMAG00000012091	si:ch73-63e15.2	92	83.319	Xiphophorus_maculatus