EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023091 (Gene tree)
Gene ID: -
Gene Symbol: snai1a
Alias: cb643|sna-1|sna1|snail1|snail1a|zgc:109820
Full Name: snail family zinc finger 1a
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1468 bases
Position: chrJH422279.1:12481763-12483230
Accession: ZDB-GENE-990415-255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000030357	zf-C2H2	PF00096.26	7.8e-22	1	4
ENSNBRP00000030357	zf-C2H2	PF00096.26	7.8e-22	2	4
ENSNBRP00000030357	zf-C2H2	PF00096.26	7.8e-22	3	4
ENSNBRP00000030357	zf-C2H2	PF00096.26	7.8e-22	4	4
ENSNBRP00000030357	zf-met	PF12874.7	1e-10	1	2
ENSNBRP00000030357	zf-met	PF12874.7	1e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031135	-	753	-	ENSNBRP00000030357	250 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000023091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023091	snai1a	57	37.143	ENSNBRG00000000305	-	78	37.143
ENSNBRG00000023091	snai1a	51	36.082	ENSNBRG00000004523	-	83	37.234
ENSNBRG00000023091	snai1a	92	58.848	ENSNBRG00000014403	-	91	59.259
ENSNBRG00000023091	snai1a	62	41.176	ENSNBRG00000016169	-	66	41.176
ENSNBRG00000023091	snai1a	52	37.500	ENSNBRG00000005805	-	93	39.773
ENSNBRG00000023091	snai1a	50	38.095	ENSNBRG00000024066	-	83	38.095
ENSNBRG00000023091	snai1a	53	35.922	ENSNBRG00000004557	-	81	37.143
ENSNBRG00000023091	snai1a	68	39.823	ENSNBRG00000021967	-	51	39.286
ENSNBRG00000023091	snai1a	73	45.455	ENSNBRG00000015873	-	96	45.455
ENSNBRG00000023091	snai1a	82	37.168	ENSNBRG00000024344	-	67	41.333
ENSNBRG00000023091	snai1a	63	43.836	ENSNBRG00000009075	znf236	52	43.836
ENSNBRG00000023091	snai1a	57	38.938	ENSNBRG00000010405	-	78	44.615
ENSNBRG00000023091	snai1a	50	43.836	ENSNBRG00000006411	-	69	43.836
ENSNBRG00000023091	snai1a	52	40.000	ENSNBRG00000024019	-	90	41.538
ENSNBRG00000023091	snai1a	74	40.367	ENSNBRG00000002902	-	97	40.909
ENSNBRG00000023091	snai1a	61	40.000	ENSNBRG00000015652	-	85	40.000
ENSNBRG00000023091	snai1a	80	100.000	ENSNBRG00000003394	-	84	100.000
ENSNBRG00000023091	snai1a	65	36.607	ENSNBRG00000004976	prdm5	55	36.607
ENSNBRG00000023091	snai1a	82	42.169	ENSNBRG00000014088	-	98	43.678
ENSNBRG00000023091	snai1a	52	36.458	ENSNBRG00000008106	-	92	36.792
ENSNBRG00000023091	snai1a	79	36.697	ENSNBRG00000005823	-	80	36.697
ENSNBRG00000023091	snai1a	60	38.298	ENSNBRG00000016603	-	88	38.298
ENSNBRG00000023091	snai1a	72	41.818	ENSNBRG00000013604	-	70	42.202
ENSNBRG00000023091	snai1a	50	38.095	ENSNBRG00000005796	-	96	38.095
ENSNBRG00000023091	snai1a	79	38.739	ENSNBRG00000007384	-	66	38.739
ENSNBRG00000023091	snai1a	52	43.243	ENSNBRG00000005849	-	83	43.243
ENSNBRG00000023091	snai1a	58	40.909	ENSNBRG00000001163	-	93	41.593
ENSNBRG00000023091	snai1a	52	41.284	ENSNBRG00000004822	-	50	42.308
ENSNBRG00000023091	snai1a	66	38.596	ENSNBRG00000024294	-	57	40.566
ENSNBRG00000023091	snai1a	79	39.744	ENSNBRG00000015442	ZNF319	62	38.750
ENSNBRG00000023091	snai1a	50	40.952	ENSNBRG00000008123	-	82	40.952
ENSNBRG00000023091	snai1a	61	43.210	ENSNBRG00000024354	-	91	43.210
ENSNBRG00000023091	snai1a	78	44.318	ENSNBRG00000016282	-	88	44.318
ENSNBRG00000023091	snai1a	55	39.216	ENSNBRG00000008223	-	72	45.000
ENSNBRG00000023091	snai1a	54	41.071	ENSNBRG00000023956	-	57	41.071
ENSNBRG00000023091	snai1a	57	36.559	ENSNBRG00000000708	-	86	36.893
ENSNBRG00000023091	snai1a	57	40.000	ENSNBRG00000002946	-	50	40.777
ENSNBRG00000023091	snai1a	56	43.548	ENSNBRG00000001641	-	77	39.286
ENSNBRG00000023091	snai1a	63	45.902	ENSNBRG00000022241	-	85	45.902
ENSNBRG00000023091	snai1a	54	37.037	ENSNBRG00000016550	-	81	37.037
ENSNBRG00000023091	snai1a	56	36.449	ENSNBRG00000009815	-	76	37.143
ENSNBRG00000023091	snai1a	61	38.889	ENSNBRG00000003250	-	92	40.000
ENSNBRG00000023091	snai1a	51	47.059	ENSNBRG00000000321	-	93	40.594
ENSNBRG00000023091	snai1a	52	36.364	ENSNBRG00000009279	-	88	36.364
ENSNBRG00000023091	snai1a	58	40.506	ENSNBRG00000008827	znf319b	65	40.000
ENSNBRG00000023091	snai1a	76	41.284	ENSNBRG00000003124	-	90	43.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023091	snai1a	50	75.806	ENSG00000124216	SNAI1	63	62.275	Homo_sapiens
ENSNBRG00000023091	snai1a	91	58.065	ENSAPOG00000016426	-	89	58.704	Acanthochromis_polyacanthus
ENSNBRG00000023091	snai1a	92	92.208	ENSAPOG00000002867	snai1a	93	89.167	Acanthochromis_polyacanthus
ENSNBRG00000023091	snai1a	83	98.551	ENSACIG00000011318	snai1a	83	98.551	Amphilophus_citrinellus
ENSNBRG00000023091	snai1a	91	55.556	ENSACIG00000009443	-	88	57.613	Amphilophus_citrinellus
ENSNBRG00000023091	snai1a	91	57.317	ENSAOCG00000019753	-	89	58.300	Amphiprion_ocellaris
ENSNBRG00000023091	snai1a	92	93.074	ENSAOCG00000018003	snai1a	93	90.000	Amphiprion_ocellaris
ENSNBRG00000023091	snai1a	82	63.810	ENSAPEG00000007647	-	84	64.186	Amphiprion_percula
ENSNBRG00000023091	snai1a	92	93.074	ENSAPEG00000024286	snai1a	93	90.000	Amphiprion_percula
ENSNBRG00000023091	snai1a	91	56.148	ENSATEG00000004944	-	89	57.143	Anabas_testudineus
ENSNBRG00000023091	snai1a	91	90.870	ENSATEG00000015639	snai1a	92	88.285	Anabas_testudineus
ENSNBRG00000023091	snai1a	82	57.488	ENSAPLG00000014633	-	86	57.488	Anas_platyrhynchos
ENSNBRG00000023091	snai1a	97	49.004	ENSACAG00000015607	SNAI1	95	51.181	Anolis_carolinensis
ENSNBRG00000023091	snai1a	91	60.000	ENSACLG00000026461	-	88	60.417	Astatotilapia_calliptera
ENSNBRG00000023091	snai1a	92	100.000	ENSACLG00000020860	snai1a	90	100.000	Astatotilapia_calliptera
ENSNBRG00000023091	snai1a	96	60.156	ENSAMXG00000039849	snai1b	90	60.156	Astyanax_mexicanus
ENSNBRG00000023091	snai1a	50	75.000	ENSCJAG00000000518	SNAI1	88	50.413	Callithrix_jacchus
ENSNBRG00000023091	snai1a	50	76.613	ENSTSYG00000010834	SNAI1	89	50.813	Carlito_syrichta
ENSNBRG00000023091	snai1a	50	75.000	ENSCATG00000041452	SNAI1	63	61.677	Cercocebus_atys
ENSNBRG00000023091	snai1a	50	75.000	ENSCSAG00000015065	SNAI1	63	61.677	Chlorocebus_sabaeus
ENSNBRG00000023091	snai1a	50	75.000	ENSCANG00000036400	SNAI1	63	61.677	Colobus_angolensis_palliatus
ENSNBRG00000023091	snai1a	63	69.091	ENSCSEG00000021022	-	77	67.725	Cynoglossus_semilaevis
ENSNBRG00000023091	snai1a	92	80.972	ENSCSEG00000009739	snai1a	94	78.516	Cynoglossus_semilaevis
ENSNBRG00000023091	snai1a	91	59.751	ENSCVAG00000009930	-	88	60.494	Cyprinodon_variegatus
ENSNBRG00000023091	snai1a	90	87.665	ENSCVAG00000008717	snai1a	88	87.665	Cyprinodon_variegatus
ENSNBRG00000023091	snai1a	91	67.391	ENSDARG00000056995	snai1a	93	66.102	Danio_rerio
ENSNBRG00000023091	snai1a	83	60.633	ENSDARG00000046019	snai1b	81	62.896	Danio_rerio
ENSNBRG00000023091	snai1a	63	61.728	ENSEBUG00000011515	snai1a	52	60.736	Eptatretus_burgeri
ENSNBRG00000023091	snai1a	95	58.367	ENSELUG00000002056	SNAI1	92	60.714	Esox_lucius
ENSNBRG00000023091	snai1a	80	66.995	ENSELUG00000004844	snai1a	80	64.623	Esox_lucius
ENSNBRG00000023091	snai1a	92	86.957	ENSFHEG00000018724	snai1a	93	83.264	Fundulus_heteroclitus
ENSNBRG00000023091	snai1a	90	58.367	ENSFHEG00000022095	-	88	57.551	Fundulus_heteroclitus
ENSNBRG00000023091	snai1a	88	81.614	ENSGMOG00000017815	snai1a	87	81.624	Gadus_morhua
ENSNBRG00000023091	snai1a	87	55.172	ENSGMOG00000000127	-	89	54.936	Gadus_morhua
ENSNBRG00000023091	snai1a	81	56.311	ENSGALG00000008018	SNAI1	77	57.767	Gallus_gallus
ENSNBRG00000023091	snai1a	92	87.391	ENSGAFG00000020143	snai1a	93	84.519	Gambusia_affinis
ENSNBRG00000023091	snai1a	91	56.967	ENSGAFG00000021126	-	89	57.377	Gambusia_affinis
ENSNBRG00000023091	snai1a	90	57.500	ENSGACG00000001618	-	87	56.250	Gasterosteus_aculeatus
ENSNBRG00000023091	snai1a	88	89.140	ENSGACG00000010147	snai1a	88	88.312	Gasterosteus_aculeatus
ENSNBRG00000023091	snai1a	82	57.746	ENSGAGG00000022705	SNAI1	80	57.009	Gopherus_agassizii
ENSNBRG00000023091	snai1a	50	75.806	ENSGGOG00000024422	SNAI1	63	62.275	Gorilla_gorilla
ENSNBRG00000023091	snai1a	91	60.000	ENSHBUG00000005726	-	88	60.417	Haplochromis_burtoni
ENSNBRG00000023091	snai1a	92	100.000	ENSHBUG00000013491	snai1a	90	100.000	Haplochromis_burtoni
ENSNBRG00000023091	snai1a	98	56.757	ENSHCOG00000020556	-	91	56.078	Hippocampus_comes
ENSNBRG00000023091	snai1a	92	87.013	ENSHCOG00000003407	snai1a	93	84.583	Hippocampus_comes
ENSNBRG00000023091	snai1a	91	60.166	ENSIPUG00000015844	snai1b	88	60.996	Ictalurus_punctatus
ENSNBRG00000023091	snai1a	64	70.115	ENSKMAG00000018546	-	70	68.557	Kryptolebias_marmoratus
ENSNBRG00000023091	snai1a	92	89.177	ENSKMAG00000021206	snai1a	89	89.610	Kryptolebias_marmoratus
ENSNBRG00000023091	snai1a	92	90.043	ENSLBEG00000017605	snai1a	93	87.083	Labrus_bergylta
ENSNBRG00000023091	snai1a	91	56.504	ENSLBEG00000006963	-	89	56.504	Labrus_bergylta
ENSNBRG00000023091	snai1a	81	57.895	ENSLACG00000017707	SNAI1	77	57.619	Latimeria_chalumnae
ENSNBRG00000023091	snai1a	91	63.090	ENSLOCG00000004443	snai1a	87	61.404	Lepisosteus_oculatus
ENSNBRG00000023091	snai1a	50	75.000	ENSMFAG00000000994	SNAI1	63	61.677	Macaca_fascicularis
ENSNBRG00000023091	snai1a	50	75.000	ENSMNEG00000036933	SNAI1	63	61.677	Macaca_nemestrina
ENSNBRG00000023091	snai1a	50	75.000	ENSMLEG00000039236	SNAI1	63	61.677	Mandrillus_leucophaeus
ENSNBRG00000023091	snai1a	91	55.466	ENSMAMG00000010384	-	89	56.275	Mastacembelus_armatus
ENSNBRG00000023091	snai1a	91	88.696	ENSMAMG00000020994	snai1a	90	87.124	Mastacembelus_armatus
ENSNBRG00000023091	snai1a	91	60.000	ENSMZEG00005026596	-	88	60.417	Maylandia_zebra
ENSNBRG00000023091	snai1a	92	100.000	ENSMZEG00005010038	snai1a	90	100.000	Maylandia_zebra
ENSNBRG00000023091	snai1a	81	56.311	ENSMGAG00000009447	SNAI1	77	57.767	Meleagris_gallopavo
ENSNBRG00000023091	snai1a	95	82.305	ENSMMOG00000019965	snai1a	99	82.305	Mola_mola
ENSNBRG00000023091	snai1a	62	68.712	ENSMMOG00000020343	-	88	57.265	Mola_mola
ENSNBRG00000023091	snai1a	93	50.628	ENSMODG00000016309	SNAI1	89	50.622	Monodelphis_domestica
ENSNBRG00000023091	snai1a	92	89.610	ENSMALG00000005785	snai1a	89	88.745	Monopterus_albus
ENSNBRG00000023091	snai1a	91	58.403	ENSMALG00000001010	-	88	58.824	Monopterus_albus
ENSNBRG00000023091	snai1a	50	75.000	ENSNLEG00000006985	SNAI1	63	61.677	Nomascus_leucogenys
ENSNBRG00000023091	snai1a	92	99.127	ENSONIG00000020305	snai1a	89	99.127	Oreochromis_niloticus
ENSNBRG00000023091	snai1a	91	59.583	ENSONIG00000017451	-	88	60.331	Oreochromis_niloticus
ENSNBRG00000023091	snai1a	88	51.304	ENSOANG00000008681	SNAI1	89	52.119	Ornithorhynchus_anatinus
ENSNBRG00000023091	snai1a	85	51.351	ENSOCUG00000005422	SNAI1	69	59.880	Oryctolagus_cuniculus
ENSNBRG00000023091	snai1a	91	58.025	ENSORLG00000009246	-	88	58.678	Oryzias_latipes
ENSNBRG00000023091	snai1a	91	87.719	ENSORLG00000023047	snai1a	89	86.842	Oryzias_latipes
ENSNBRG00000023091	snai1a	91	58.025	ENSORLG00020001758	-	88	58.678	Oryzias_latipes_hni
ENSNBRG00000023091	snai1a	91	87.281	ENSORLG00020019789	snai1a	89	86.404	Oryzias_latipes_hni
ENSNBRG00000023091	snai1a	91	87.719	ENSORLG00015015416	snai1a	89	86.842	Oryzias_latipes_hsok
ENSNBRG00000023091	snai1a	91	57.613	ENSORLG00015019424	-	88	58.264	Oryzias_latipes_hsok
ENSNBRG00000023091	snai1a	91	87.719	ENSOMEG00000023773	snai1a	89	87.281	Oryzias_melastigma
ENSNBRG00000023091	snai1a	62	67.470	ENSOMEG00000012928	-	91	56.522	Oryzias_melastigma
ENSNBRG00000023091	snai1a	50	75.000	ENSPANG00000007536	SNAI1	63	61.677	Papio_anubis
ENSNBRG00000023091	snai1a	90	61.157	ENSPKIG00000006393	snai1a	86	62.397	Paramormyrops_kingsleyae
ENSNBRG00000023091	snai1a	93	58.650	ENSPKIG00000006067	-	79	65.550	Paramormyrops_kingsleyae
ENSNBRG00000023091	snai1a	82	57.346	ENSPSIG00000003607	SNAI1	78	57.009	Pelodiscus_sinensis
ENSNBRG00000023091	snai1a	91	87.773	ENSPMGG00000023198	snai1a	92	84.874	Periophthalmus_magnuspinnatus
ENSNBRG00000023091	snai1a	72	63.402	ENSPMGG00000006947	-	88	57.991	Periophthalmus_magnuspinnatus
ENSNBRG00000023091	snai1a	93	50.628	ENSPCIG00000023282	SNAI1	89	49.793	Phascolarctos_cinereus
ENSNBRG00000023091	snai1a	92	87.446	ENSPFOG00000015709	snai1a	93	84.583	Poecilia_formosa
ENSNBRG00000023091	snai1a	63	70.440	ENSPFOG00000008667	-	64	70.732	Poecilia_formosa
ENSNBRG00000023091	snai1a	94	85.169	ENSPLAG00000011169	snai1a	96	85.169	Poecilia_latipinna
ENSNBRG00000023091	snai1a	63	67.251	ENSPLAG00000010605	-	67	67.614	Poecilia_latipinna
ENSNBRG00000023091	snai1a	92	87.446	ENSPMEG00000017260	snai1a	93	84.583	Poecilia_mexicana
ENSNBRG00000023091	snai1a	63	67.251	ENSPMEG00000007205	-	67	67.614	Poecilia_mexicana
ENSNBRG00000023091	snai1a	92	87.013	ENSPREG00000022303	snai1a	93	84.167	Poecilia_reticulata
ENSNBRG00000023091	snai1a	87	56.170	ENSPREG00000018470	-	89	56.967	Poecilia_reticulata
ENSNBRG00000023091	snai1a	50	75.000	ENSPPYG00000011122	SNAI1	63	61.677	Pongo_abelii
ENSNBRG00000023091	snai1a	92	100.000	ENSPNYG00000018944	snai1a	90	100.000	Pundamilia_nyererei
ENSNBRG00000023091	snai1a	92	59.259	ENSPNYG00000001207	-	91	59.671	Pundamilia_nyererei
ENSNBRG00000023091	snai1a	97	60.558	ENSPNAG00000024123	snai1b	91	61.753	Pygocentrus_nattereri
ENSNBRG00000023091	snai1a	50	75.000	ENSRBIG00000026992	SNAI1	63	61.677	Rhinopithecus_bieti
ENSNBRG00000023091	snai1a	50	75.000	ENSRROG00000043753	SNAI1	63	61.677	Rhinopithecus_roxellana
ENSNBRG00000023091	snai1a	50	75.000	ENSSBOG00000034760	SNAI1	88	51.240	Saimiri_boliviensis_boliviensis
ENSNBRG00000023091	snai1a	93	50.207	ENSSHAG00000011015	SNAI1	89	50.207	Sarcophilus_harrisii
ENSNBRG00000023091	snai1a	90	65.789	ENSSFOG00015021578	snai1a	86	66.228	Scleropages_formosus
ENSNBRG00000023091	snai1a	91	57.085	ENSSMAG00000008834	-	89	57.085	Scophthalmus_maximus
ENSNBRG00000023091	snai1a	92	89.744	ENSSMAG00000013652	snai1a	93	87.243	Scophthalmus_maximus
ENSNBRG00000023091	snai1a	92	91.342	ENSSDUG00000019933	snai1a	89	91.342	Seriola_dumerili
ENSNBRG00000023091	snai1a	91	58.130	ENSSDUG00000017250	-	89	59.091	Seriola_dumerili
ENSNBRG00000023091	snai1a	92	91.342	ENSSLDG00000011412	snai1a	89	91.342	Seriola_lalandi_dorsalis
ENSNBRG00000023091	snai1a	91	57.724	ENSSLDG00000025359	-	89	58.678	Seriola_lalandi_dorsalis
ENSNBRG00000023091	snai1a	82	57.075	ENSSPUG00000018057	SNAI1	78	56.744	Sphenodon_punctatus
ENSNBRG00000023091	snai1a	92	92.208	ENSSPAG00000001874	snai1a	93	89.167	Stegastes_partitus
ENSNBRG00000023091	snai1a	91	58.130	ENSSPAG00000001098	-	89	59.109	Stegastes_partitus
ENSNBRG00000023091	snai1a	81	56.863	ENSTGUG00000008724	SNAI1	76	57.843	Taeniopygia_guttata
ENSNBRG00000023091	snai1a	92	87.500	ENSTRUG00000022990	sna1	93	84.647	Takifugu_rubripes
ENSNBRG00000023091	snai1a	64	67.059	ENSTRUG00000000419	sna2	88	57.261	Takifugu_rubripes
ENSNBRG00000023091	snai1a	98	81.707	ENSTNIG00000007311	snai1a	93	82.988	Tetraodon_nigroviridis
ENSNBRG00000023091	snai1a	64	68.263	ENSTNIG00000003865	-	88	57.983	Tetraodon_nigroviridis
ENSNBRG00000023091	snai1a	84	54.976	ENSXETG00000027366	snai1	80	55.605	Xenopus_tropicalis
ENSNBRG00000023091	snai1a	91	58.874	ENSXCOG00000008003	-	89	58.874	Xiphophorus_couchianus
ENSNBRG00000023091	snai1a	95	85.417	ENSXCOG00000017528	snai1a	93	85.417	Xiphophorus_couchianus
ENSNBRG00000023091	snai1a	96	55.859	ENSXMAG00000015281	-	97	56.250	Xiphophorus_maculatus
ENSNBRG00000023091	snai1a	95	85.000	ENSXMAG00000027735	snai1a	93	85.000	Xiphophorus_maculatus