EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000023214 (Gene tree)
Gene ID: 102799840
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3330 bases
Position: chrJH422279.1:12582601-12585930
Accession: 102799840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000030519	MMR_HSR1	PF01926.23	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000031297	-	621	XM_006784712	ENSNBRP00000030519	206 (aa)	XP_006784775	UPI0003EC48F8

Gene Model

Click here to download ENSNBRG00000023214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000023214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000023214	si:dkey-13a21.4	85	40.678	ENSNBRG00000002082	rab30	79	40.678
ENSNBRG00000023214	si:dkey-13a21.4	79	34.756	ENSNBRG00000016922	-	72	34.756
ENSNBRG00000023214	si:dkey-13a21.4	77	55.000	ENSNBRG00000013940	rab9b	72	55.000
ENSNBRG00000023214	si:dkey-13a21.4	59	40.164	ENSNBRG00000011872	-	59	40.164
ENSNBRG00000023214	si:dkey-13a21.4	77	36.875	ENSNBRG00000005082	RAB39B	74	36.875
ENSNBRG00000023214	si:dkey-13a21.4	72	40.000	ENSNBRG00000007077	rab33ba	57	40.000
ENSNBRG00000023214	si:dkey-13a21.4	87	33.880	ENSNBRG00000019750	rab34a	69	33.880
ENSNBRG00000023214	si:dkey-13a21.4	74	31.447	ENSNBRG00000003915	rasl11b	63	31.447
ENSNBRG00000023214	si:dkey-13a21.4	79	30.303	ENSNBRG00000016978	rhebl1	87	30.303
ENSNBRG00000023214	si:dkey-13a21.4	82	33.918	ENSNBRG00000023885	-	76	33.918
ENSNBRG00000023214	si:dkey-13a21.4	79	30.286	ENSNBRG00000011713	rasl11a	66	30.286
ENSNBRG00000023214	si:dkey-13a21.4	83	30.994	ENSNBRG00000000489	rabl2	73	30.994
ENSNBRG00000023214	si:dkey-13a21.4	79	50.610	ENSNBRG00000024340	RAB9A	77	50.610
ENSNBRG00000023214	si:dkey-13a21.4	83	32.948	ENSNBRG00000017793	RAB17	75	32.948
ENSNBRG00000023214	si:dkey-13a21.4	95	36.634	ENSNBRG00000002684	zgc:101559	85	36.634
ENSNBRG00000023214	si:dkey-13a21.4	84	34.857	ENSNBRG00000002726	-	80	34.857
ENSNBRG00000023214	si:dkey-13a21.4	80	33.735	ENSNBRG00000022552	dnajc27	61	33.735
ENSNBRG00000023214	si:dkey-13a21.4	99	51.442	ENSNBRG00000002772	-	99	51.442
ENSNBRG00000023214	si:dkey-13a21.4	85	33.333	ENSNBRG00000002778	RAB15	82	33.333
ENSNBRG00000023214	si:dkey-13a21.4	86	34.637	ENSNBRG00000011763	rab5aa	81	34.637
ENSNBRG00000023214	si:dkey-13a21.4	76	36.478	ENSNBRG00000018106	-	73	36.478
ENSNBRG00000023214	si:dkey-13a21.4	75	36.538	ENSNBRG00000015905	rab6bb	76	36.538
ENSNBRG00000023214	si:dkey-13a21.4	85	39.548	ENSNBRG00000004124	rab13	87	39.548
ENSNBRG00000023214	si:dkey-13a21.4	100	30.698	ENSNBRG00000012893	rab11a	98	30.698
ENSNBRG00000023214	si:dkey-13a21.4	85	49.718	ENSNBRG00000002825	-	84	49.718
ENSNBRG00000023214	si:dkey-13a21.4	99	35.238	ENSNBRG00000013673	rab6ba	98	35.238
ENSNBRG00000023214	si:dkey-13a21.4	82	33.918	ENSNBRG00000000372	rab11bb	76	33.918
ENSNBRG00000023214	si:dkey-13a21.4	76	38.037	ENSNBRG00000007544	rab32b	73	38.037
ENSNBRG00000023214	si:dkey-13a21.4	76	39.623	ENSNBRG00000021487	rab42a	59	39.623
ENSNBRG00000023214	si:dkey-13a21.4	79	34.756	ENSNBRG00000018165	rab5c	73	34.756
ENSNBRG00000023214	si:dkey-13a21.4	83	37.288	ENSNBRG00000013507	rab18a	85	37.288
ENSNBRG00000023214	si:dkey-13a21.4	87	37.989	ENSNBRG00000008137	rab18b	86	37.989
ENSNBRG00000023214	si:dkey-13a21.4	79	37.423	ENSNBRG00000001241	rab2a	75	37.423
ENSNBRG00000023214	si:dkey-13a21.4	57	33.898	ENSNBRG00000002346	RAP2B	95	34.884
ENSNBRG00000023214	si:dkey-13a21.4	78	38.889	ENSNBRG00000020492	-	78	38.889
ENSNBRG00000023214	si:dkey-13a21.4	82	31.765	ENSNBRG00000014613	si:ch73-116o1.2	80	31.765
ENSNBRG00000023214	si:dkey-13a21.4	90	33.333	ENSNBRG00000005542	-	85	33.333
ENSNBRG00000023214	si:dkey-13a21.4	78	38.650	ENSNBRG00000014428	rab12	65	38.650
ENSNBRG00000023214	si:dkey-13a21.4	78	38.272	ENSNBRG00000016716	rab6a	76	38.272
ENSNBRG00000023214	si:dkey-13a21.4	74	38.065	ENSNBRG00000008714	RAB29	68	38.065
ENSNBRG00000023214	si:dkey-13a21.4	78	34.146	ENSNBRG00000005116	rab11al	71	34.810
ENSNBRG00000023214	si:dkey-13a21.4	70	31.034	ENSNBRG00000004403	kras	87	30.178
ENSNBRG00000023214	si:dkey-13a21.4	99	52.381	ENSNBRG00000021829	RAB7A	99	52.381
ENSNBRG00000023214	si:dkey-13a21.4	95	36.500	ENSNBRG00000022702	rab41	92	36.500
ENSNBRG00000023214	si:dkey-13a21.4	77	38.994	ENSNBRG00000008930	si:dkey-16l2.16	74	38.994
ENSNBRG00000023214	si:dkey-13a21.4	73	38.462	ENSNBRG00000017996	-	66	38.462
ENSNBRG00000023214	si:dkey-13a21.4	80	36.364	ENSNBRG00000013691	rab23	74	36.538
ENSNBRG00000023214	si:dkey-13a21.4	95	36.765	ENSNBRG00000022235	rab33a	83	36.765
ENSNBRG00000023214	si:dkey-13a21.4	85	34.463	ENSNBRG00000001056	rab15	81	34.463
ENSNBRG00000023214	si:dkey-13a21.4	78	39.506	ENSNBRG00000006202	zgc:171927	75	39.506
ENSNBRG00000023214	si:dkey-13a21.4	82	34.503	ENSNBRG00000023898	rab11ba	63	34.503
ENSNBRG00000023214	si:dkey-13a21.4	78	37.654	ENSNBRG00000003873	rab1ba	79	37.654
ENSNBRG00000023214	si:dkey-13a21.4	82	35.503	ENSNBRG00000011607	rab25a	78	35.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000023214	si:dkey-13a21.4	99	91.133	ENSACIG00000011024	si:dkey-13a21.4	99	91.133	Amphilophus_citrinellus
ENSNBRG00000023214	si:dkey-13a21.4	99	86.700	ENSAOCG00000020491	si:dkey-13a21.4	99	86.700	Amphiprion_ocellaris
ENSNBRG00000023214	si:dkey-13a21.4	100	85.437	ENSAPEG00000023338	si:dkey-13a21.4	93	85.437	Amphiprion_percula
ENSNBRG00000023214	si:dkey-13a21.4	99	83.744	ENSATEG00000014958	si:dkey-13a21.4	99	83.744	Anabas_testudineus
ENSNBRG00000023214	si:dkey-13a21.4	95	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSNBRG00000023214	si:dkey-13a21.4	100	97.087	ENSACLG00000021109	si:dkey-13a21.4	100	97.087	Astatotilapia_calliptera
ENSNBRG00000023214	si:dkey-13a21.4	99	53.991	ENSAMXG00000032663	si:dkey-13a21.4	98	53.991	Astyanax_mexicanus
ENSNBRG00000023214	si:dkey-13a21.4	83	60.345	WBGene00004271	rab-7	96	54.500	Caenorhabditis_elegans
ENSNBRG00000023214	si:dkey-13a21.4	99	85.222	ENSCVAG00000001150	si:dkey-13a21.4	99	85.222	Cyprinodon_variegatus
ENSNBRG00000023214	si:dkey-13a21.4	95	63.077	ENSDARG00000026098	si:dkey-13a21.4	95	63.077	Danio_rerio
ENSNBRG00000023214	si:dkey-13a21.4	86	53.333	ENSDNOG00000043559	-	96	50.505	Dasypus_novemcinctus
ENSNBRG00000023214	si:dkey-13a21.4	99	82.843	ENSFHEG00000002502	si:dkey-13a21.4	99	82.843	Fundulus_heteroclitus
ENSNBRG00000023214	si:dkey-13a21.4	98	82.673	ENSGAFG00000020102	si:dkey-13a21.4	99	82.673	Gambusia_affinis
ENSNBRG00000023214	si:dkey-13a21.4	100	97.573	ENSHBUG00000014023	si:dkey-13a21.4	100	97.573	Haplochromis_burtoni
ENSNBRG00000023214	si:dkey-13a21.4	85	80.000	ENSKMAG00000021039	si:dkey-13a21.4	74	80.000	Kryptolebias_marmoratus
ENSNBRG00000023214	si:dkey-13a21.4	97	86.500	ENSLBEG00000018180	si:dkey-13a21.4	98	86.500	Labrus_bergylta
ENSNBRG00000023214	si:dkey-13a21.4	95	61.929	ENSLOCG00000014749	si:dkey-13a21.4	96	61.929	Lepisosteus_oculatus
ENSNBRG00000023214	si:dkey-13a21.4	85	53.714	ENSLAFG00000028984	-	85	53.714	Loxodonta_africana
ENSNBRG00000023214	si:dkey-13a21.4	99	85.714	ENSMAMG00000021095	si:dkey-13a21.4	99	85.714	Mastacembelus_armatus
ENSNBRG00000023214	si:dkey-13a21.4	100	96.602	ENSMZEG00005010220	si:dkey-13a21.4	100	96.602	Maylandia_zebra
ENSNBRG00000023214	si:dkey-13a21.4	99	97.537	ENSONIG00000020296	si:dkey-13a21.4	99	97.537	Oreochromis_niloticus
ENSNBRG00000023214	si:dkey-13a21.4	99	81.281	ENSORLG00000025098	si:dkey-13a21.4	99	81.281	Oryzias_latipes
ENSNBRG00000023214	si:dkey-13a21.4	99	80.788	ENSORLG00020019465	si:dkey-13a21.4	99	80.788	Oryzias_latipes_hni
ENSNBRG00000023214	si:dkey-13a21.4	99	81.281	ENSORLG00015015121	si:dkey-13a21.4	99	81.281	Oryzias_latipes_hsok
ENSNBRG00000023214	si:dkey-13a21.4	95	63.452	ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	Paramormyrops_kingsleyae
ENSNBRG00000023214	si:dkey-13a21.4	100	77.619	ENSPMGG00000023170	si:dkey-13a21.4	100	77.619	Periophthalmus_magnuspinnatus
ENSNBRG00000023214	si:dkey-13a21.4	98	83.168	ENSPFOG00000015409	si:dkey-13a21.4	99	83.168	Poecilia_formosa
ENSNBRG00000023214	si:dkey-13a21.4	98	83.168	ENSPLAG00000019688	si:dkey-13a21.4	99	83.168	Poecilia_latipinna
ENSNBRG00000023214	si:dkey-13a21.4	98	83.168	ENSPMEG00000019159	si:dkey-13a21.4	99	83.168	Poecilia_mexicana
ENSNBRG00000023214	si:dkey-13a21.4	98	82.673	ENSPREG00000022241	si:dkey-13a21.4	99	82.673	Poecilia_reticulata
ENSNBRG00000023214	si:dkey-13a21.4	100	97.087	ENSPNYG00000018613	si:dkey-13a21.4	100	97.087	Pundamilia_nyererei
ENSNBRG00000023214	si:dkey-13a21.4	95	45.771	YML001W	YPT7	96	45.771	Saccharomyces_cerevisiae
ENSNBRG00000023214	si:dkey-13a21.4	95	63.776	ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	Scleropages_formosus
ENSNBRG00000023214	si:dkey-13a21.4	100	82.039	ENSSMAG00000013945	si:dkey-13a21.4	100	82.039	Scophthalmus_maximus
ENSNBRG00000023214	si:dkey-13a21.4	99	90.640	ENSSDUG00000019738	si:dkey-13a21.4	99	90.640	Seriola_dumerili
ENSNBRG00000023214	si:dkey-13a21.4	99	90.148	ENSSLDG00000011597	si:dkey-13a21.4	99	90.148	Seriola_lalandi_dorsalis
ENSNBRG00000023214	si:dkey-13a21.4	95	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis